Andreas Prlic

Summary

Affiliation: University of California
Country: USA

Publications

  1. pmc Pre-calculated protein structure alignments at the RCSB PDB website
    Andreas Prlic
    San Diego Supercomputer Center, University of California San Diego, 9500 Gilman Drive, Mailcode 0505 La Jolla, CA 92093 0505, USA
    Bioinformatics 26:2983-5. 2010
  2. pmc The RCSB Protein Data Bank: new resources for research and education
    Peter W Rose
    San Diego Supercomputer Center, University of California San Diego, La Jolla, CA 92093 0743, USA
    Nucleic Acids Res 41:D475-82. 2013
  3. pmc Quality assurance for the query and distribution systems of the RCSB Protein Data Bank
    Wolfgang F Bluhm
    University of California San Diego, La Jolla, CA 92093 0743, USA
    Database (Oxford) 2011:bar003. 2011
  4. pmc The RCSB Protein Data Bank: redesigned web site and web services
    Peter W Rose
    San Diego Supercomputer Center, University of California San Diego, 9500 Gilman Drive, Mailcode 0743, La Jolla, CA 92093 0743, USA
    Nucleic Acids Res 39:D392-401. 2011
  5. pmc BioJava: an open-source framework for bioinformatics in 2012
    Andreas Prlic
    San Diego Supercomputer Center, University of California San Diego, La Jolla, CA 92093, USA
    Bioinformatics 28:2693-5. 2012
  6. pmc Integration of open access literature into the RCSB Protein Data Bank using BioLit
    Andreas Prlic
    San Diego Supercomputer Center, University of California San Diego, 9500 Gilman Drive, Mailcode 0505 La Jolla, CA 92093 0505, USA
    BMC Bioinformatics 11:220. 2010

Collaborators

Detail Information

Publications6

  1. pmc Pre-calculated protein structure alignments at the RCSB PDB website
    Andreas Prlic
    San Diego Supercomputer Center, University of California San Diego, 9500 Gilman Drive, Mailcode 0505 La Jolla, CA 92093 0505, USA
    Bioinformatics 26:2983-5. 2010
    ..rcsb.org/pdb/workbench/workbench.do. The source code is available under the LGPL license from http://www.biojava.org. A source bundle, prepared for local execution, is available from http://source.rcsb.org..
  2. pmc The RCSB Protein Data Bank: new resources for research and education
    Peter W Rose
    San Diego Supercomputer Center, University of California San Diego, La Jolla, CA 92093 0743, USA
    Nucleic Acids Res 41:D475-82. 2013
    ..These improvements enable new opportunities for analyzing and understanding structure data...
  3. pmc Quality assurance for the query and distribution systems of the RCSB Protein Data Bank
    Wolfgang F Bluhm
    University of California San Diego, La Jolla, CA 92093 0743, USA
    Database (Oxford) 2011:bar003. 2011
    ..As such it provides suggestions for how other websites might be operated...
  4. pmc The RCSB Protein Data Bank: redesigned web site and web services
    Peter W Rose
    San Diego Supercomputer Center, University of California San Diego, 9500 Gilman Drive, Mailcode 0743, La Jolla, CA 92093 0743, USA
    Nucleic Acids Res 39:D392-401. 2011
    ..These improvements enable a range of new possibilities to analyze and understand structure data. The next generation of the RCSB PDB web site, as described here, provides a rich resource for research and education...
  5. pmc BioJava: an open-source framework for bioinformatics in 2012
    Andreas Prlic
    San Diego Supercomputer Center, University of California San Diego, La Jolla, CA 92093, USA
    Bioinformatics 28:2693-5. 2012
    ..BioJava is an open-source project for processing of biological data in the Java programming language. We have recently released a new version (3.0.5), which is a major update to the code base that greatly extends its functionality...
  6. pmc Integration of open access literature into the RCSB Protein Data Bank using BioLit
    Andreas Prlic
    San Diego Supercomputer Center, University of California San Diego, 9500 Gilman Drive, Mailcode 0505 La Jolla, CA 92093 0505, USA
    BMC Bioinformatics 11:220. 2010
    ..To exploit this opportunity we present the integration of open access literature with the RCSB Protein Data Bank (PDB)...