Angela P Presson

Summary

Affiliation: University of California
Country: USA

Publications

  1. pmc Merging microsatellite data: enhanced methodology and software to combine genotype data for linkage and association analysis
    Angela P Presson
    Department of Human Genetics, University of California, Los Angeles, CA 90095, USA
    BMC Bioinformatics 9:317. 2008
  2. pmc Integrated weighted gene co-expression network analysis with an application to chronic fatigue syndrome
    Angela P Presson
    Biostatistics, University of California, Los Angeles, CA, USA
    BMC Syst Biol 2:95. 2008
  3. pmc Protein expression based multimarker analysis of breast cancer samples
    Angela P Presson
    Department of Biostatistics, UCLA, Los Angeles, CA 90095, USA
    BMC Cancer 11:230. 2011
  4. pmc Methodology and software to detect viral integration site hot-spots
    Angela P Presson
    Department of Biostatistics, University of California Los Angeles, School of Public Health, USA
    BMC Bioinformatics 12:367. 2011
  5. ncbi request reprint Merging microsatellite data
    Angela P Presson
    Department of Statistics, University of California, Los Angeles, Los Angeles, CA 90095, USA
    J Comput Biol 13:1131-47. 2006
  6. ncbi request reprint Dynamics of HSPC repopulation in nonhuman primates revealed by a decade-long clonal-tracking study
    Sanggu Kim
    Department of Microbiology, Immunology, and Molecular Genetics, University of California, Los Angeles, Los Angeles, CA 90095, USA UCLA AIDS Institute, University of California, Los Angeles, Los Angeles, CA 90095, USA
    Cell Stem Cell 14:473-85. 2014
  7. pmc High-throughput, sensitive quantification of repopulating hematopoietic stem cell clones
    Sanggu Kim
    Department of Microbiology, University of California, David Geffen School of Medicine, Los Angeles, CA 90095, USA
    J Virol 84:11771-80. 2010
  8. pmc Pathway analysis software: annotation errors and solutions
    Nicole K Henderson-Maclennan
    Department of Pediatrics, David Geffen School of Medicine at UCLA, Los Angeles, CA 90095 7088, USA
    Mol Genet Metab 101:134-40. 2010
  9. doi request reprint Current estimate of Down Syndrome population prevalence in the United States
    Angela P Presson
    Department of Biostatistics, University of California Los Angeles, Los Angeles, CA Division of Epidemiology, Department of Internal Medicine, University of Utah, Salt Lake City, UT
    J Pediatr 163:1163-8. 2013

Collaborators

Detail Information

Publications9

  1. pmc Merging microsatellite data: enhanced methodology and software to combine genotype data for linkage and association analysis
    Angela P Presson
    Department of Human Genetics, University of California, Los Angeles, CA 90095, USA
    BMC Bioinformatics 9:317. 2008
    ..A consequence of such alignments is that codominant genotypes must often be analyzed as phenotypes. In this paper we describe several extensions that are implemented in MicroMerge version 2 (v2)...
  2. pmc Integrated weighted gene co-expression network analysis with an application to chronic fatigue syndrome
    Angela P Presson
    Biostatistics, University of California, Los Angeles, CA, USA
    BMC Syst Biol 2:95. 2008
    ..Here we show that the additional inclusion of genetic marker data allows one to characterize network relationships as causal or reactive in a chronic fatigue syndrome (CFS) data set...
  3. pmc Protein expression based multimarker analysis of breast cancer samples
    Angela P Presson
    Department of Biostatistics, UCLA, Los Angeles, CA 90095, USA
    BMC Cancer 11:230. 2011
    ..Several studies have shown that TMA data can also be used to cluster patients into clinically distinct groups. Here we use breast cancer TMA data to cluster patients into distinct prognostic groups...
  4. pmc Methodology and software to detect viral integration site hot-spots
    Angela P Presson
    Department of Biostatistics, University of California Los Angeles, School of Public Health, USA
    BMC Bioinformatics 12:367. 2011
    ..This is problematic for comparing hot-spot distributions across data sets and patients, where the VIS numbers may vary...
  5. ncbi request reprint Merging microsatellite data
    Angela P Presson
    Department of Statistics, University of California, Los Angeles, Los Angeles, CA 90095, USA
    J Comput Biol 13:1131-47. 2006
    ..It also reports when data sets cannot be confidently merged. These features are emphasized in our analysis of simulated and real data...
  6. ncbi request reprint Dynamics of HSPC repopulation in nonhuman primates revealed by a decade-long clonal-tracking study
    Sanggu Kim
    Department of Microbiology, Immunology, and Molecular Genetics, University of California, Los Angeles, Los Angeles, CA 90095, USA UCLA AIDS Institute, University of California, Los Angeles, Los Angeles, CA 90095, USA
    Cell Stem Cell 14:473-85. 2014
    ..Our study therefore documents HSPC behavior in a clinically relevant model over a long time frame and provides a substantial system-level data set that is a reference point for future work. ..
  7. pmc High-throughput, sensitive quantification of repopulating hematopoietic stem cell clones
    Sanggu Kim
    Department of Microbiology, University of California, David Geffen School of Medicine, Los Angeles, CA 90095, USA
    J Virol 84:11771-80. 2010
    ..This assay permits high-throughput and sensitive assessment of clonal populations and hence will be useful for a broad range of gene therapy, stem cell, and cancer research applications...
  8. pmc Pathway analysis software: annotation errors and solutions
    Nicole K Henderson-Maclennan
    Department of Pediatrics, David Geffen School of Medicine at UCLA, Los Angeles, CA 90095 7088, USA
    Mol Genet Metab 101:134-40. 2010
    ..We propose a wiki type website to facilitate communication of bioinformatics software problems within the scientific community...
  9. doi request reprint Current estimate of Down Syndrome population prevalence in the United States
    Angela P Presson
    Department of Biostatistics, University of California Los Angeles, Los Angeles, CA Division of Epidemiology, Department of Internal Medicine, University of Utah, Salt Lake City, UT
    J Pediatr 163:1163-8. 2013
    ..To calculate a reliable estimate of the population prevalence of Down syndrome in the US...