Rupali P Patwardhan

Summary

Affiliation: University of Washington
Country: USA

Publications

  1. pmc Gene networks in Drosophila melanogaster: integrating experimental data to predict gene function
    James C Costello
    School of Informatics, Indiana University, E, Tenth St, Bloomington, Indiana 47408, USA
    Genome Biol 10:R97. 2009
  2. pmc High-resolution analysis of DNA regulatory elements by synthetic saturation mutagenesis
    Rupali P Patwardhan
    Department of Genome Sciences, University of Washington, Seattle, Washington, USA
    Nat Biotechnol 27:1173-5. 2009
  3. pmc Massively parallel functional dissection of mammalian enhancers in vivo
    Rupali P Patwardhan
    Department of Genome Sciences, University of Washington, Seattle, Washington, USA
    Nat Biotechnol 30:265-70. 2012
  4. pmc Parallel, tag-directed assembly of locally derived short sequence reads
    Joseph B Hiatt
    Department of Genome Sciences, University of Washington, Seattle, Washington, USA
    Nat Methods 7:119-22. 2010
  5. pmc Haplotype-resolved genome sequencing of a Gujarati Indian individual
    Jacob O Kitzman
    Department of Genome Sciences, University of Washington School of Medicine, Seattle, Washington, USA
    Nat Biotechnol 29:59-63. 2011

Collaborators

Detail Information

Publications5

  1. pmc Gene networks in Drosophila melanogaster: integrating experimental data to predict gene function
    James C Costello
    School of Informatics, Indiana University, E, Tenth St, Bloomington, Indiana 47408, USA
    Genome Biol 10:R97. 2009
    ..Collectively, the growing body of high-throughput functional genomics data provides evidence of gene function, but remains difficult to interpret...
  2. pmc High-resolution analysis of DNA regulatory elements by synthetic saturation mutagenesis
    Rupali P Patwardhan
    Department of Genome Sciences, University of Washington, Seattle, Washington, USA
    Nat Biotechnol 27:1173-5. 2009
    ..The method may also serve as a rapid screening tool for regulatory element engineering in synthetic biology...
  3. pmc Massively parallel functional dissection of mammalian enhancers in vivo
    Rupali P Patwardhan
    Department of Genome Sciences, University of Washington, Seattle, Washington, USA
    Nat Biotechnol 30:265-70. 2012
    ....
  4. pmc Parallel, tag-directed assembly of locally derived short sequence reads
    Joseph B Hiatt
    Department of Genome Sciences, University of Washington, Seattle, Washington, USA
    Nat Methods 7:119-22. 2010
    ..Subassembly may facilitate accurate de novo genome assembly and metagenome sequencing...
  5. pmc Haplotype-resolved genome sequencing of a Gujarati Indian individual
    Jacob O Kitzman
    Department of Genome Sciences, University of Washington School of Medicine, Seattle, Washington, USA
    Nat Biotechnol 29:59-63. 2011
    ..This method also facilitates the analysis of structural variation, for example, to anchor novel insertions to specific locations and haplotypes...