Cao Nguyen

Summary

Affiliation: University of Colorado at Denver
Country: USA

Publications

  1. ncbi A hidden Markov model for predicting protein interfaces
    Cao Nguyen
    Department of Computer Science and Engineering, University of Colorado at Denver and Health Sciences, Denver, CO 80217, USA
    J Bioinform Comput Biol 5:739-53. 2007
  2. ncbi Proteomic data mining using predicted peptide chromatographic retention times
    Brian Tripet
    Department of Biochemistry and Molecular Genetics, University of Colorado at Denver and Health Sciences Center, Aurora, CO 80045, USA
    Int J Bioinform Res Appl 3:431-45. 2007
  3. ncbi ClusFCM: an algorithm for predicting protein functions using homologies and protein interactions
    Cao Nguyen
    Virginia Commonwealth University, VA 23238, USA
    J Bioinform Comput Biol 6:203-22. 2008

Collaborators

  • Brian Tripet
  • Robert Hodges
  • Megha Renuka Jayadev
  • Don Blow
  • Krzysztof Cios

Detail Information

Publications3

  1. ncbi A hidden Markov model for predicting protein interfaces
    Cao Nguyen
    Department of Computer Science and Engineering, University of Colorado at Denver and Health Sciences, Denver, CO 80217, USA
    J Bioinform Comput Biol 5:739-53. 2007
    ..These results are better than those achieved by other methods used for identification of interfaces...
  2. ncbi Proteomic data mining using predicted peptide chromatographic retention times
    Brian Tripet
    Department of Biochemistry and Molecular Genetics, University of Colorado at Denver and Health Sciences Center, Aurora, CO 80045, USA
    Int J Bioinform Res Appl 3:431-45. 2007
    ..coli - K12 proteins. The retention calculation is based on the described formulae and the fragments/protein identification was carried out using a simple search-scoring algorithm...
  3. ncbi ClusFCM: an algorithm for predicting protein functions using homologies and protein interactions
    Cao Nguyen
    Virginia Commonwealth University, VA 23238, USA
    J Bioinform Comput Biol 6:203-22. 2008
    ..The results indicate that ClusFCM predicts protein functions with high recall while not lowering precision. Supplementary information is available at http://www.egr.vcu.edu/cs/dmb/ClusFCM/...