Research Topics
| Alexander MogilnerSummaryAffiliation: University of California Country: USA Publications
Research Grants
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Detail Information
Publications
Mechanism of shape determination in motile cellsKinneret Keren
Department of Biochemistry, Technion Israel Institute of Technology, Haifa 32000, Israel
Nature 453:475-80. 2008..Our model provides a simple biochemical and biophysical basis for the observed morphology and behaviour of motile cells...
Regulation of actin dynamics in rapidly moving cells: a quantitative analysisAlex Mogilner
Department of Mathematics and Institute of Theoretical Dynamics, University of California, Davis, California 95616 USA
Biophys J 83:1237-58. 2002..Our results suggest that to achieve rapid motility, some tuning of parameters affecting actin dynamics must be operating in the cell...
Quantitative modeling in cell biology: what is it good for?Alex Mogilner
Department of Neurobiology, Physiology and Behavior, University of California, Davis, 95616, USA
Dev Cell 11:279-87. 2006....
Quantitative analysis of an anaphase B switch: predicted role for a microtubule catastrophe gradientDhanya K Cheerambathur
Department of Molecular and Cellular Biology, University of California at Davis, Davis, CA 95616, USA
J Cell Biol 177:995-1004. 2007..The resulting redistribution of ipMT plus ends to the overlap zone, together with the suppression of minus-end depolymerization at the poles, could constitute a mechanical switch that initiates spindle elongation...
Cell polarity: quantitative modeling as a tool in cell biologyAlex Mogilner
Department of Neurobiology, Physiology, and Behavior, University of California, Davis, CA 95616, USA
Science 336:175-9. 2012..We argue that a quantitative model is a tool that has to fit an experimental study, and the model's value should be judged not by how complex and detailed it is, but by what could be learned from it...
Cell polarity: tension quenches the rearAlex Mogilner
Department of Neurobiology, Physiology and Behavior and Department of Mathematics, University of California, Davis, CA 95616, USA
Curr Biol 22:R48-51. 2012....
Modeling cellular processes in 3DAlex Mogilner
Department of Neurobiology, Physiology and Behavior, University of California, Davis, CA 95616, USA
Trends Cell Biol 21:692-700. 2011....
On the edge: modeling protrusionAlex Mogilner
Department of Mathematics and Center for Genetics and Development, University of California, Davis, California 95616, USA
Curr Opin Cell Biol 18:32-9. 2006..By considering these models, their limitations and their relationships to recent biophysical data, progress is being made toward a unified model of protrusion...
Modeling mitosisAlex Mogilner
Laboratory of Cell and Computational Biology, Center for Genetics and Development, University of California, Davis, CA 95616, USA
Trends Cell Biol 16:88-96. 2006..We discuss some limitations of the application of modeling to other aspects of mitosis and the feasibility of building more comprehensive system-level models...
Mathematics of cell motility: have we got its number?Alex Mogilner
Department of Neurobiology, Physiology and Behavior, University of California, Davis, CA, 95618, USA
J Math Biol 58:105-34. 2009..We also comment on modeling approaches and open questions...
The shape of motile cellsAlex Mogilner
Department of Neurobiology, Physiology and Behavior, University of California, Davis, CA 95616, USA
Curr Biol 19:R762-71. 2009..Focusing on several different cell types, including keratocytes and fibroblasts, we discuss how dynamic cell morphology emerges from the interplay between the different motility modules and the environment...
Actin disassembly 'clock' and membrane tension determine cell shape and turning: a mathematical modelA Mogilner
Department of Neurobiology, Physiology and Behavior, University of California, Davis, CA 95616 USA
J Phys Condens Matter 22:194118. 2010..We demonstrate that the theory predicts the observed cell shapes. Furthermore, turning of the cells can be explained by biases in the actin distribution. We discuss experimental implications of this hypothesis...
Towards a quantitative understanding of mitotic spindle assembly and mechanicsAlex Mogilner
Department of Neurobiology, Physiology and Behavior, and Department of Mathematics, University of California, Davis, CA 95616, USA
J Cell Sci 123:3435-45. 2010....
The physics of filopodial protrusionA Mogilner
Department of Mathematics, Center for Genetics and Development, University of California, Davis, 95616, USA
Biophys J 89:782-95. 2005....
Polymer motors: pushing out the front and pulling up the backAlex Mogilner
Department of Mathematics, University of California, Davis, CA 95616, USA
Curr Biol 13:R721-33. 2003..We discuss several examples of cellular forces generated by the assembly and disassembly of polymer gels...
Cell biology. Shrinking gels pull cellsAlex Mogilner
Department of Mathematics and Center for Genetics and Development, University of California, Davis, CA 95616, USA
Science 302:1340-1. 2003
Mutual interactions, potentials, and individual distance in a social aggregationA Mogilner
Dept of Mathematics and Center for Genetics and Development, Univ of California, Davis, CA 95616, USA
J Math Biol 47:353-89. 2003..When the number of individuals in a group increases, a dichotomy occurs between swarms in which individual distance is preserved versus those in which the physical size of the group is maintained at the expense of greater crowding...
How nematode sperm crawlDean Bottino
Department of Molecular and Cellular Biology, University of California, Berkeley, CA 94720-3112, USA
J Cell Sci 115:367-84. 2002..Although the model refers primarily to the locomotion of nematode sperm, it has important implications for the mechanics of actin-based cell motility...
Mechanical stochastic tug-of-war models cannot explain bidirectional lipid-droplet transportAmbarish Kunwar
Department of Neurobiology, Physiology and Behavior, University of California, Davis, CA 95616, USA
Proc Natl Acad Sci U S A 108:18960-5. 2011..Neither model agrees well with our in vivo data, suggesting that, in addition to inevitable tugs-of-war between opposite motors, there is an additional level of regulation not included in the models...
The hydration dynamics of polyelectrolyte gels with applications to cell motility and drug deliveryCharles W Wolgemuth
Departments of Molecular and Cellular Biology and ESPM, University of California, Berkeley, CA 94720-3112, USA
Eur Biophys J 33:146-58. 2004..Second, we use the model to describe the locomotion of nematode sperm cells. Finally, we describe the swelling dynamics of polyelectrolyte gels used for drug release...
Robust transport by multiple motors with nonlinear force-velocity relations and stochastic load sharingAmbarish Kunwar
Department of Neurobiology, Physiology and Behavior, University of California Davis, Davis, CA 95616, USA
Phys Biol 7:16012. 2010..Finally, our simulations predict that the stochastic effects are responsible for a significant dispersion of velocities generated by the 'tug-of-war' of the multiple opposing motors...
Non-local concepts and models in biologyC T Lee
Institute of Theoretical Dynamics, University of California, Davis, CA 95616, USA
J Theor Biol 210:201-19. 2001..We illustrate these arguments by comparing local and non-local models for the aggregation of hypothetical organisms, and we support theoretical ideas with concrete examples from cell biology and animal behavior...
Model of bacterial band formation in aerotaxisB C Mazzag
Department of Mathematics, Humboldt State University, Arcata, California 95521, USA
Biophys J 85:3558-74. 2003..We make testable predictions about position and density of the bacterial band...
Computational model of dynein-dependent self-organization of microtubule astersE N Cytrynbaum
Laboratory of Cell and Computational Biology, Department of Mathematics and Center for Genetics and Development, University of California, Davis, CA 95616, USA
J Cell Sci 117:1381-97. 2004..The model provides stringent constraints on rates and concentrations describing microtubule and motor dynamics, and sheds light on the role of polymer dynamics and polymer-motor interactions in cytoskeletal organization...
Efficient chromosome capture requires a bias in the 'search-and-capture' process during mitotic-spindle assemblyR Wollman
Laboratory of Cell and Computational Biology, Center for Genetics and Development, University of California, Davis, Davis, California 95616, USA
Curr Biol 15:828-32. 2005..We discuss the possibility that a RanGTP gradient introduces a spatial bias into microtubule dynamics and thus improves the efficiency of search-and-capture as a mechanism for spindle assembly...
A force balance model of early spindle pole separation in Drosophila embryosE N Cytrynbaum
Center for Genetics and Development, Section of Molecular and Cell Biology, University of California, Davis, California 95616, USA
Biophys J 84:757-69. 2003....
Early spindle assembly in Drosophila embryos: role of a force balance involving cytoskeletal dynamics and nuclear mechanicsE N Cytrynbaum
Laboratory of Cell and Computational Biology, Center for Genetics and Development, University of California, Davis, Davis, CA 95616, USA
Mol Biol Cell 16:4967-81. 2005..Thus, the force-balance driving early spindle morphogenesis depends upon MT-based motors acting in concert with the cortex and nucleus...
Direct measurement of the lamellipodial protrusive force in a migrating cellMarcus Prass
Institute of Biophysics, University of Bremen, D-28359 Bremen, Germany
J Cell Biol 174:767-72. 2006..Rather, the curves indicate that the protrusive force generation is a complex multiphase process involving actin and adhesion dynamics...
Cooperativity between cell contractility and adhesionIgor L Novak
Department of Cell Biology, University of Connecticut Health Center, Farmington, Connecticut 06030, USA
Phys Rev Lett 93:268109. 2004..The model predicts that the focal adhesions propagate by treadmilling with a velocity proportional to the integrin diffusion coefficient...
Force generation by actin polymerization II: the elastic ratchet and tethered filamentsAlex Mogilner
Department of Mathematics and Center for Genetics and Development, University of California, Davis 95616, USA
Biophys J 84:1591-605. 2003..We also discuss "symmetry breaking" dynamics observed in ActA-coated bead experiments, and the implications of the model for lamellipodial protrusion in migrating cells...
Cell divisionJonathan M Scholey
Laboratory of Cell and Computational Biology, Center for Genetics and Development, University of California, Davis, California 95616, USA
Nature 422:746-52. 2003....
Quantitative analysis of G-actin transport in motile cellsIgor L Novak
Center for Cell Analysis and Modeling, University of Connecticut Health Center, Farmington, Connecticut 06030, USA
Biophys J 95:1627-38. 2008..We discuss biological implications of the local and global regimes of the G-actin transport...
Reverse engineering of force integration during mitosis in the Drosophila embryoRoy Wollman
Laboratory of Cell and Computational Biology, Center for Genetics and Development, University of California at Davis, Davis, CA 95616, USA
Mol Syst Biol 4:195. 2008..Identified differences among the six predicted strategies regarding the mechanisms of prometaphase and anaphase spindle elongation suggest future experiments...
Stochastic simulation of actin dynamics reveals the role of annealing and fragmentationJoseph Fass
Department of Neurobiology, Physiology and Behavior, University of California, Davis, CA 95616 8633, USA
J Theor Biol 252:173-83. 2008..The simulations compare well with experimentally measured actin polymerization data and lend additional support to a number of existing theoretical models...
Weak force stalls protrusion at the leading edge of the lamellipodiumSophie Bohnet
Laboratory of Cell Biophysics, Ecole Polytechnique Federale de Lausanne EPFL, Lausanne, Switzerland
Biophys J 90:1810-20. 2006..We conclude that a weak external force is sufficient to reorient the growing actin network at the leading edge and to stall the protrusion...
Model of polarization and bistability of cell fragmentsMichael M Kozlov
Department of Physiology and Pharmacology, Sackler Faculty of Medicine, Tel Aviv University, Tel Aviv, Israel
Biophys J 93:3811-9. 2007..The model accounts for the observations of the keratocyte fragments' behavior and generates quantitative predictions about relations between the intracellular forces' magnitudes and the cell geometry and motility...
A homotetrameric kinesin-5, KLP61F, bundles microtubules and antagonizes Ncd in motility assaysLi Tao
Laboratory of Cell and Computational Biology, Center for Genetics and Development, University of California, Davis, Davis, California 95616, USA
Curr Biol 16:2293-302. 2006..We tested whether purified KLP61F homotetramers and Ncd homodimers can generate a force balance capable of maintaining a constant spindle length in Drosophila embryos...
Emergence of large-scale cell morphology and movement from local actin filament growth dynamicsCatherine I Lacayo
Department of Biochemistry, Stanford University, Stanford, California, United States of America
PLoS Biol 5:e233. 2007....
Chemotactic signaling, microglia, and Alzheimer's disease senile plaques: is there a connection?Magdalena Luca
Massachusetts College of Pharmacy and Health Sciences, School of Arts and Sciences, 179 Longwood Avenue, Boston, MA 021 15 5896, USA
Bull Math Biol 65:693-730. 2003..Using biological parameters from the literature, we compare and discuss the applicability of this model to actual processes in AD...
Research Grants
- Dynamics of Mitotic Spindle Morphogenesis.Alexander Mogilner; Fiscal Year: 2006..The models will allow to test plausible scenarios of mitosis and cell division. They will provide a new interdisciplinary level of understanding and predicting dynamic cell behavior in important biomedical situations. ..
- Modeling mitotic spindle assemblyAlexander Mogilner; Fiscal Year: 2007..The modeling framework will be applicable for a number of fundamental mechanochemical processes such as cytokinesis and cell motility, a quantitative understanding of which is important for biomedical applications. ..
- Modeling mitotic spindle assemblyAlexander Mogilner; Fiscal Year: 2009..The modeling framework will be applicable for a number of fundamental mechanochemical processes such as cytokinesis and cell motility, quantitative understanding of which is important for biomedical applications. ..
- Modeling mitotic spindle assemblyAlexander Mogilner; Fiscal Year: 2010..The modeling framework will be applicable for a number of fundamental mechanochemical processes such as cytokinesis and cell motility, quantitative understanding of which is important for biomedical applications. ..
