Christopher S Miller
Affiliation: University of California
- EMIRGE: reconstruction of full-length ribosomal genes from microbial community short read sequencing dataChristopher S Miller
Department of Earth and Planetary Science, University of California, Berkeley, 307 McCone Hall 4767, Berkeley, CA 94720, USA
Genome Biol 12:R44. 2011..An implementation of the method is freely available at https://github.com/csmiller/EMIRGE...
- Heterotrophic archaea contribute to carbon cycling in low-pH, suboxic biofilm communitiesNicholas B Justice
University of California Berkeley, Berkeley, California, USA
Appl Environ Microbiol 78:8321-30. 2012..These findings indicate dominance of acidophilic archaea in degrading biofilms and suggest that they play roles in anaerobic nutrient cycling at low pH...
- Fermentation, hydrogen, and sulfur metabolism in multiple uncultivated bacterial phylaKelly C Wrighton
Department of Earth and Planetary Science, University of California, Berkeley, Berkeley, CA 94720, USA
Science 337:1661-5. 2012..For six organisms, the UGA stop codon is translated as tryptophan. All bacteria studied here may play previously unrecognized roles in hydrogen production, sulfur cycling, and fermentation of refractory sedimentary carbon...