Eric Martz

Summary

Affiliation: University of Massachusetts
Country: USA

Publications

  1. ncbi Proteopedia - a scientific 'wiki' bridging the rift between three-dimensional structure and function of biomacromolecules
    Eran Hodis
    Department of Structural Biology, Weizmann Institute of Science, Rehovot 76100, Israel
    Genome Biol 9:R121. 2008
  2. ncbi Epitopia: a web-server for predicting B-cell epitopes
    Nimrod D Rubinstein
    Department of Cell Research and Immunology, George S Wise Faculty of Life Sciences, Tel Aviv University, Tel Aviv 69978, Israel
    BMC Bioinformatics 10:287. 2009
  3. ncbi Protein Explorer: easy yet powerful macromolecular visualization
    Eric Martz
    Department of Microbiology, University of Massachusetts, Amherst MA 01003, USA
    Trends Biochem Sci 27:107-9. 2002
  4. ncbi ConSurf: identification of functional regions in proteins by surface-mapping of phylogenetic information
    Fabian Glaser
    The George S Wise Faculty of Life Sciences, Tel Aviv University, Ramat Aviv 69978, Israel
    Bioinformatics 19:163-4. 2003
  5. ncbi Selecton 2007: advanced models for detecting positive and purifying selection using a Bayesian inference approach
    Adi Stern
    Department of Cell Research and Immunology, George S Wise Faculty of Life Sciences, Tel Aviv University, Ramat Aviv 69978, Israel
    Nucleic Acids Res 35:W506-11. 2007
  6. ncbi ConSurf 2005: the projection of evolutionary conservation scores of residues on protein structures
    Meytal Landau
    Department of Biochemistry, George S. Wise Faculty of Life Sciences, Tel Aviv University, Ramat Aviv 69978, Israel
    Nucleic Acids Res 33:W299-302. 2005
  7. ncbi Pepitope: epitope mapping from affinity-selected peptides
    Itay Mayrose
    Department of Cell Research and Immunology, George S Wise Faculty of Life Sciences, Tel Aviv University, Tel Aviv 69978, Israel
    Bioinformatics 23:3244-6. 2007

Collaborators

  • Tal Pupko
  • Roded Sharan
  • Fabian Glaser
  • Itay Mayrose
  • Nimrod D Rubinstein
  • Eran Hodis
  • Elana Erez
  • Adi Stern
  • Meytal Landau
  • Israel Silman
  • John Moult
  • Joel L Sussman
  • Jaime Prilusky
  • Eran Bacharach
  • Adi Doron Faigenboim
  • Osnat Penn
  • Adi Doron-Faigenboim
  • Natalia Tarnovitski Freund
  • Erez M Bublil
  • Tomer Shlomi
  • Jonathan M Gershoni
  • Eytan Ruppin
  • Yossi Rosenberg
  • Nir Ben-Tal

Detail Information

Publications7

  1. ncbi Proteopedia - a scientific 'wiki' bridging the rift between three-dimensional structure and function of biomacromolecules
    Eran Hodis
    Department of Structural Biology, Weizmann Institute of Science, Rehovot 76100, Israel
    Genome Biol 9:R121. 2008
    ....
  2. ncbi Epitopia: a web-server for predicting B-cell epitopes
    Nimrod D Rubinstein
    Department of Cell Research and Immunology, George S Wise Faculty of Life Sciences, Tel Aviv University, Tel Aviv 69978, Israel
    BMC Bioinformatics 10:287. 2009
    ..Due to the impracticality of experimental approaches to systematically scan the entire protein, a computational tool that predicts the most probable epitope regions is desirable...
  3. ncbi Protein Explorer: easy yet powerful macromolecular visualization
    Eric Martz
    Department of Microbiology, University of Massachusetts, Amherst MA 01003, USA
    Trends Biochem Sci 27:107-9. 2002
    ....
  4. ncbi ConSurf: identification of functional regions in proteins by surface-mapping of phylogenetic information
    Fabian Glaser
    The George S Wise Faculty of Life Sciences, Tel Aviv University, Ramat Aviv 69978, Israel
    Bioinformatics 19:163-4. 2003
    ..AVAILABILITY: The ConSurf web server is available at:http://consurf.tau.ac.il. SUPPLEMENTARY INFORMATION: A set of examples is available at http://consurf.tau.ac.il under 'GALLERY'...
  5. ncbi Selecton 2007: advanced models for detecting positive and purifying selection using a Bayesian inference approach
    Adi Stern
    Department of Cell Research and Immunology, George S Wise Faculty of Life Sciences, Tel Aviv University, Ramat Aviv 69978, Israel
    Nucleic Acids Res 35:W506-11. 2007
    ..2 is an effective, user-friendly and freely available web server which implements up-to-date methods for computing site-specific selection forces, and the visualization of these forces on the protein's sequence and structure...
  6. ncbi ConSurf 2005: the projection of evolutionary conservation scores of residues on protein structures
    Meytal Landau
    Department of Biochemistry, George S. Wise Faculty of Life Sciences, Tel Aviv University, Ramat Aviv 69978, Israel
    Nucleic Acids Res 33:W299-302. 2005
    ..Moreover, ConSurf version 3.0 also includes a measure of confidence for the inferred amino acid conservation scores...
  7. ncbi Pepitope: epitope mapping from affinity-selected peptides
    Itay Mayrose
    Department of Cell Research and Immunology, George S Wise Faculty of Life Sciences, Tel Aviv University, Tel Aviv 69978, Israel
    Bioinformatics 23:3244-6. 2007
    ..Pepitope can also be applied for inferring other types of protein-protein interactions beyond the immunological context, and as a general tool for aligning linear sequences to a 3D structure. AVAILABILITY: http://pepitope.tau.ac.il/..