Eric Martz

Summary

Affiliation: University of Massachusetts
Country: USA

Publications

  1. pmc Proteopedia - a scientific 'wiki' bridging the rift between three-dimensional structure and function of biomacromolecules
    Eran Hodis
    Department of Structural Biology, Weizmann Institute of Science, Rehovot 76100, Israel
    Genome Biol 9:R121. 2008
  2. pmc Epitopia: a web-server for predicting B-cell epitopes
    Nimrod D Rubinstein
    Department of Cell Research and Immunology, George S Wise Faculty of Life Sciences, Tel Aviv University, Tel Aviv 69978, Israel
    BMC Bioinformatics 10:287. 2009
  3. ncbi request reprint Protein Explorer: easy yet powerful macromolecular visualization
    Eric Martz
    Department of Microbiology, University of Massachusetts, Amherst MA 01003, USA
    Trends Biochem Sci 27:107-9. 2002
  4. ncbi request reprint ConSurf: identification of functional regions in proteins by surface-mapping of phylogenetic information
    Fabian Glaser
    The George S Wise Faculty of Life Sciences, Tel Aviv University, Ramat Aviv 69978, Israel
    Bioinformatics 19:163-4. 2003
  5. pmc Selecton 2007: advanced models for detecting positive and purifying selection using a Bayesian inference approach
    Adi Stern
    Department of Cell Research and Immunology, George S Wise Faculty of Life Sciences, Tel Aviv University, Ramat Aviv 69978, Israel
    Nucleic Acids Res 35:W506-11. 2007
  6. pmc ConSurf 2005: the projection of evolutionary conservation scores of residues on protein structures
    Meytal Landau
    Department of Biochemistry, George S Wise Faculty of Life Sciences, Tel Aviv University, Ramat Aviv 69978, Israel
    Nucleic Acids Res 33:W299-302. 2005
  7. ncbi request reprint Pepitope: epitope mapping from affinity-selected peptides
    Itay Mayrose
    Department of Cell Research and Immunology, George S Wise Faculty of Life Sciences, Tel Aviv University, Tel Aviv 69978, Israel
    Bioinformatics 23:3244-6. 2007

Collaborators

  • Tal Pupko
  • Roded Sharan
  • Fabian Glaser
  • Itay Mayrose
  • Nimrod D Rubinstein
  • Eran Hodis
  • Elana Erez
  • Adi Stern
  • Meytal Landau
  • Joel L Sussman
  • Israel Silman
  • Jaime Prilusky
  • John Moult
  • Tomer Shlomi
  • Eran Bacharach
  • Eytan Ruppin
  • Natalia Tarnovitski Freund
  • Adi Doron-Faigenboim
  • Jonathan M Gershoni
  • Erez M Bublil
  • Osnat Penn
  • Yossi Rosenberg
  • Nir Ben-Tal

Detail Information

Publications7

  1. pmc Proteopedia - a scientific 'wiki' bridging the rift between three-dimensional structure and function of biomacromolecules
    Eran Hodis
    Department of Structural Biology, Weizmann Institute of Science, Rehovot 76100, Israel
    Genome Biol 9:R121. 2008
    ....
  2. pmc Epitopia: a web-server for predicting B-cell epitopes
    Nimrod D Rubinstein
    Department of Cell Research and Immunology, George S Wise Faculty of Life Sciences, Tel Aviv University, Tel Aviv 69978, Israel
    BMC Bioinformatics 10:287. 2009
    ..Due to the impracticality of experimental approaches to systematically scan the entire protein, a computational tool that predicts the most probable epitope regions is desirable...
  3. ncbi request reprint Protein Explorer: easy yet powerful macromolecular visualization
    Eric Martz
    Department of Microbiology, University of Massachusetts, Amherst MA 01003, USA
    Trends Biochem Sci 27:107-9. 2002
    ....
  4. ncbi request reprint ConSurf: identification of functional regions in proteins by surface-mapping of phylogenetic information
    Fabian Glaser
    The George S Wise Faculty of Life Sciences, Tel Aviv University, Ramat Aviv 69978, Israel
    Bioinformatics 19:163-4. 2003
    ..We present a new web server, ConSurf, which automates these algorithmic tools. ConSurf may be used for high-throughput characterization of functional regions in proteins...
  5. pmc Selecton 2007: advanced models for detecting positive and purifying selection using a Bayesian inference approach
    Adi Stern
    Department of Cell Research and Immunology, George S Wise Faculty of Life Sciences, Tel Aviv University, Ramat Aviv 69978, Israel
    Nucleic Acids Res 35:W506-11. 2007
    ..2 is an effective, user-friendly and freely available web server which implements up-to-date methods for computing site-specific selection forces, and the visualization of these forces on the protein's sequence and structure...
  6. pmc ConSurf 2005: the projection of evolutionary conservation scores of residues on protein structures
    Meytal Landau
    Department of Biochemistry, George S Wise Faculty of Life Sciences, Tel Aviv University, Ramat Aviv 69978, Israel
    Nucleic Acids Res 33:W299-302. 2005
    ..Moreover, ConSurf version 3.0 also includes a measure of confidence for the inferred amino acid conservation scores...
  7. ncbi request reprint Pepitope: epitope mapping from affinity-selected peptides
    Itay Mayrose
    Department of Cell Research and Immunology, George S Wise Faculty of Life Sciences, Tel Aviv University, Tel Aviv 69978, Israel
    Bioinformatics 23:3244-6. 2007
    ..Pepitope can also be applied for inferring other types of protein-protein interactions beyond the immunological context, and as a general tool for aligning linear sequences to a 3D structure. AVAILABILITY: http://pepitope.tau.ac.il/..