P M Mabee

Summary

Affiliation: University of South Dakota
Country: USA

Publications

  1. ncbi An experimental study of intraspecific variation, developmental timing, and heterochrony in fishes
    P M Mabee
    Department of Biology, University of South Dakota, Vermillion 57069, USA
    Evolution 54:2091-106. 2000
  2. ncbi Connecting evolutionary morphology to genomics using ontologies: a case study from Cypriniformes including zebrafish
    Paula M Mabee
    Department of Biology, University of South Dakota, Vermillion, South Dakota 57069, USA
    J Exp Zool B Mol Dev Evol 308:655-68. 2007
  3. ncbi Phenotype ontologies: the bridge between genomics and evolution
    Paula M Mabee
    Department of Biology, University of South Dakota, Vermillion, SD 57069, USA
    Trends Ecol Evol 22:345-50. 2007
  4. ncbi Development of the paired fins in the paddlefish, Polyodon spathula
    Paula M Mabee
    Department of Biology, University of South Dakota, Vermillion, South Dakota 57069, USA
    J Morphol 261:334-44. 2004
  5. ncbi Evolution of median fin modules in the axial skeleton of fishes
    Paula M Mabee
    Department of Biology, University of South Dakota, Vermillion, South Dakota 57069, USA
    J Exp Zool 294:77-90. 2002
  6. ncbi Gene expression patterns underlying proximal-distal skeletal segmentation in late-stage zebrafish, Danio rerio
    Patricia L Crotwell
    Department of Biology, University of South Dakota, Vermillion, South Dakota 57069, USA
    Dev Dyn 236:3111-28. 2007
  7. ncbi Evolutionary characters, phenotypes and ontologies: curating data from the systematic biology literature
    Wasila M Dahdul
    Department of Biology, University of South Dakota, Vermillion, South Dakota, USA
    PLoS ONE 5:e10708. 2010
  8. ncbi The teleost anatomy ontology: anatomical representation for the genomics age
    Wasila M Dahdul
    Department of Biology, University of South Dakota, Vermillion, SD 57069, USA
    Syst Biol 59:369-83. 2010
  9. ncbi Development of the mandibular, hyoid arch and gill arch skeleton in the Chinese barb Puntius semifasciolatus: comparisons of ossification sequences among Cypriniformes
    A J Block
    Department of Biology, University of South Dakota, Vermillion, SD 57069, USA
    J Fish Biol 81:54-80. 2012
  10. ncbi Expression of bmp2a and bmp2b in late-stage zebrafish median fin development
    Patricia L Crotwell
    Department of Biology, University of South Dakota, 414 East Clark Street, CL 191, Vermillion, SD 57069, USA
    Gene Expr Patterns 5:291-6. 2004

Collaborators

Detail Information

Publications13

  1. ncbi An experimental study of intraspecific variation, developmental timing, and heterochrony in fishes
    P M Mabee
    Department of Biology, University of South Dakota, Vermillion 57069, USA
    Evolution 54:2091-106. 2000
    ..Thus, variation existed in sequence position across temperatures and species. Intraspecific variation of this sort may influence the morphological outcome and evolutionary trajectories of species...
  2. ncbi Connecting evolutionary morphology to genomics using ontologies: a case study from Cypriniformes including zebrafish
    Paula M Mabee
    Department of Biology, University of South Dakota, Vermillion, South Dakota 57069, USA
    J Exp Zool B Mol Dev Evol 308:655-68. 2007
    ..We present examples that demonstrate the broad utility of this approach...
  3. ncbi Phenotype ontologies: the bridge between genomics and evolution
    Paula M Mabee
    Department of Biology, University of South Dakota, Vermillion, SD 57069, USA
    Trends Ecol Evol 22:345-50. 2007
    ....
  4. ncbi Development of the paired fins in the paddlefish, Polyodon spathula
    Paula M Mabee
    Department of Biology, University of South Dakota, Vermillion, South Dakota 57069, USA
    J Morphol 261:334-44. 2004
    ..The later ossification of the cleithrum in Polyodon may be related to the primary use of the caudal fin vs. the pectoral fins in their locomotion...
  5. ncbi Evolution of median fin modules in the axial skeleton of fishes
    Paula M Mabee
    Department of Biology, University of South Dakota, Vermillion, South Dakota 57069, USA
    J Exp Zool 294:77-90. 2002
    ..In acanthopterygians, a new first dorsal fin module evolved via duplication and divergence. The median fins provide an example of how basic modularity is maintained over 400 million years of evolution...
  6. ncbi Gene expression patterns underlying proximal-distal skeletal segmentation in late-stage zebrafish, Danio rerio
    Patricia L Crotwell
    Department of Biology, University of South Dakota, Vermillion, South Dakota 57069, USA
    Dev Dyn 236:3111-28. 2007
    ..Together, these data suggest a scenario of gene interactions underlying radial segmentation based on the patterns and timing of candidate gene expression...
  7. ncbi Evolutionary characters, phenotypes and ontologies: curating data from the systematic biology literature
    Wasila M Dahdul
    Department of Biology, University of South Dakota, Vermillion, South Dakota, USA
    PLoS ONE 5:e10708. 2010
    ..This entails reconceptualizing the traditional free-text characters into the computable Entity-Quality (EQ) formalism using ontologies...
  8. ncbi The teleost anatomy ontology: anatomical representation for the genomics age
    Wasila M Dahdul
    Department of Biology, University of South Dakota, Vermillion, SD 57069, USA
    Syst Biol 59:369-83. 2010
    ....
  9. ncbi Development of the mandibular, hyoid arch and gill arch skeleton in the Chinese barb Puntius semifasciolatus: comparisons of ossification sequences among Cypriniformes
    A J Block
    Department of Biology, University of South Dakota, Vermillion, SD 57069, USA
    J Fish Biol 81:54-80. 2012
    ....
  10. ncbi Expression of bmp2a and bmp2b in late-stage zebrafish median fin development
    Patricia L Crotwell
    Department of Biology, University of South Dakota, 414 East Clark Street, CL 191, Vermillion, SD 57069, USA
    Gene Expr Patterns 5:291-6. 2004
    ..Additionally, both genes are expressed in neural and hemal arches and spines. bmp2a is strongly expressed in the lens; lens bmp2b expression is detected only weakly via RT-PCR...
  11. ncbi Gdf5 is expressed in the developing skeleton of median fins of late-stage zebrafish, Danio rerio
    P L Crotwell
    Department of Biology, University of South Dakota, Vermillion, SD 57069, USA
    Dev Genes Evol 211:555-8. 2001
    ..After growth to 7.5 mm, Gdf5 transcripts can no longer be detected in any of the median fins, nor is Gdf5 expression reinitiated in later development of the median fin skeleton...
  12. ncbi Developmental morphology of the axial skeleton of the zebrafish, Danio rerio (Ostariophysi: Cyprinidae)
    Nathan C Bird
    Department of Biology, University of South Dakota, Vermillion, South Dakota 57069, USA
    Dev Dyn 228:337-57. 2003
    ..Because homology forms the basis for all evolutionary comparisons, these data are critical for integration in evo-devo studies...
  13. ncbi Development of the pharyngeal arch skeleton in Catostomus commersonii (Teleostei: Cypriniformes)
    Jeffrey M Engeman
    Department of Biology, University of South Dakota, Vermillion, South Dakota 57069, USA
    J Morphol 270:291-305. 2009
    ..Such "fluidity" in cartilage patterning may be widespread in fishes and requires further comparative developmental studies...