Ovidiu Lipan

Summary

Affiliation: University of Richmond
Country: USA

Publications

  1. pmc Heat shock response in CHO mammalian cells is controlled by a nonlinear stochastic process
    Ovidiu Lipan
    Department of Physics, University of Richmond, Richmond, Virginia, USA
    PLoS Comput Biol 3:1859-70. 2007
  2. pmc Sensing the heat stress by Mammalian cells
    Jordan Cates
    Department of Physics, University of Richmond, 28 Westhampton Way, Richmond, VA 23173, USA
    BMC Biophys 4:16. 2011
  3. doi request reprint Systems biology. Enlightening Rhythms
    Ovidiu Lipan
    Department of Physics, University of Richmond, Richmond, VA 23173, USA
    Science 319:417-8. 2008
  4. ncbi request reprint Is the future biology Shakespearean or Newtonian?
    Ovidiu Lipan
    Center for Biotechnology and Genomic Medicine, Medical College of Georgia, 1120 15th St CA 4139, Augusta, GA, 30912, USA
    Mol Biosyst 2:411-6. 2006
  5. pmc The use of oscillatory signals in the study of genetic networks
    Ovidiu Lipan
    Center for Biotechnology and Genomic Medicine, Medical College of Georgia, 1120 15th Street, CA 4124, Augusta, GA 30912, USA
    Proc Natl Acad Sci U S A 102:7063-8. 2005
  6. pmc The effect of coupled stochastic processes in a two-state biochemical switch
    Garrett C Graham
    Department of Physics, University of Richmond, 28 Westhampton Way, Richmond, VA 23173 USA
    J Biol Phys 37:441-62. 2011
  7. pmc Impact of Interdisciplinary Undergraduate Research in mathematics and biology on the development of a new course integrating five STEM disciplines
    Lester Caudill
    Departments of Mathematics and Computer Science, Physics, University of Richmond, Richmond, VA 23173, USA
    CBE Life Sci Educ 9:212-6. 2010
  8. ncbi request reprint GoSurfer: a graphical interactive tool for comparative analysis of large gene sets in Gene Ontology space
    Sheng Zhong
    Department of Biostatistics, Harvard School of Public Health, Boston, Massachusetts, USA
    Appl Bioinformatics 3:261-4. 2004
  9. ncbi request reprint Distinct temporal genetic signatures of neurogenic and gliogenic cues in cortical stem cell cultures
    Claire Sauvageot
    Department of Cancer Biology, Dana Farber Cancer Institute, Harvard Medical School, Boston, Massachusetts 02115, USA
    J Neurobiol 62:121-33. 2005
  10. ncbi request reprint Extensive and divergent circadian gene expression in liver and heart
    Kai Florian Storch
    Department of Neurobiology, Harvard Medical School, Northeastern University, Boston, Massachusetts 02115, USA
    Nature 417:78-83. 2002

Collaborators

  • Garrett C Graham
  • Jordan Cates
  • Lester Caudill
  • Kai Florian Storch
  • Claire Sauvageot
  • Sheng Zhong
  • Wing H Wong
  • Charles J Weitz
  • Caitlin Lee Smith
  • Ian Setliff
  • Jack Shaw
  • Natalie Omattage
  • Elizabeth Pavesich
  • April Hill
  • Kathy Hoke
  • John A Alberta
  • Charles D Stiles
  • John K Park
  • Mi Sook Chang
  • Patricia L Dahia
  • Ming Chih J Kao
  • Fred C Davis
  • Igor Leykin
  • N Viswanathan

Detail Information

Publications10

  1. pmc Heat shock response in CHO mammalian cells is controlled by a nonlinear stochastic process
    Ovidiu Lipan
    Department of Physics, University of Richmond, Richmond, Virginia, USA
    PLoS Comput Biol 3:1859-70. 2007
    ..The prediction was experimentally confirmed by measurements at the single-cell level. The computational approach can be used to study other nonlinear stochastic biological phenomena...
  2. pmc Sensing the heat stress by Mammalian cells
    Jordan Cates
    Department of Physics, University of Richmond, 28 Westhampton Way, Richmond, VA 23173, USA
    BMC Biophys 4:16. 2011
    ..abstract:..
  3. doi request reprint Systems biology. Enlightening Rhythms
    Ovidiu Lipan
    Department of Physics, University of Richmond, Richmond, VA 23173, USA
    Science 319:417-8. 2008
  4. ncbi request reprint Is the future biology Shakespearean or Newtonian?
    Ovidiu Lipan
    Center for Biotechnology and Genomic Medicine, Medical College of Georgia, 1120 15th St CA 4139, Augusta, GA, 30912, USA
    Mol Biosyst 2:411-6. 2006
    ..We emphasize the importance of a molecular Signal Generator in the study of genetic networks...
  5. pmc The use of oscillatory signals in the study of genetic networks
    Ovidiu Lipan
    Center for Biotechnology and Genomic Medicine, Medical College of Georgia, 1120 15th Street, CA 4124, Augusta, GA 30912, USA
    Proc Natl Acad Sci U S A 102:7063-8. 2005
    ..We found that there are important advantages in using oscillatory signals over step or impulse signals and that the system may enter into a pure fluctuation resonance for a specific input frequency...
  6. pmc The effect of coupled stochastic processes in a two-state biochemical switch
    Garrett C Graham
    Department of Physics, University of Richmond, 28 Westhampton Way, Richmond, VA 23173 USA
    J Biol Phys 37:441-62. 2011
    ..It is also found that the environment can drastically change the response of the switch, which has important biological consequences...
  7. pmc Impact of Interdisciplinary Undergraduate Research in mathematics and biology on the development of a new course integrating five STEM disciplines
    Lester Caudill
    Departments of Mathematics and Computer Science, Physics, University of Richmond, Richmond, VA 23173, USA
    CBE Life Sci Educ 9:212-6. 2010
    ....
  8. ncbi request reprint GoSurfer: a graphical interactive tool for comparative analysis of large gene sets in Gene Ontology space
    Sheng Zhong
    Department of Biostatistics, Harvard School of Public Health, Boston, Massachusetts, USA
    Appl Bioinformatics 3:261-4. 2004
    ..gosurfer.org. Datasets used to construct the trees shown in the figures in this article are available at http://www.gosurfer.org/download/GoSurfer.zip...
  9. ncbi request reprint Distinct temporal genetic signatures of neurogenic and gliogenic cues in cortical stem cell cultures
    Claire Sauvageot
    Department of Cancer Biology, Dana Farber Cancer Institute, Harvard Medical School, Boston, Massachusetts 02115, USA
    J Neurobiol 62:121-33. 2005
    ..Multitissue cluster analysis also reveals tissue-specific gene signatures that may play important roles in the developing brain...
  10. ncbi request reprint Extensive and divergent circadian gene expression in liver and heart
    Kai Florian Storch
    Department of Neurobiology, Harvard Medical School, Northeastern University, Boston, Massachusetts 02115, USA
    Nature 417:78-83. 2002
    ..A core set of 37 genes with similar circadian regulation in both tissues includes candidates for new clock genes and output genes, and it contains genes responsive to circulating factors with circadian or diurnal rhythms...