Emily O Kistner

Summary

Affiliation: University of Chicago
Country: USA

Publications

  1. pmc Ulcerative colitis-risk loci on chromosomes 1p36 and 12q15 found by genome-wide association study
    Mark S Silverberg
    Mount Sinai Hospital Inflammatory Bowel Disease Group, University of Toronto, 600 University Avenue, Toronto, ON M5G1X5, Canada
    Nat Genet 41:216-20. 2009
  2. pmc Using cases and parents to study multiplicative gene-by-environment interaction
    Emily O Kistner
    Department of Health Studies, Division of Biological Sciences, The University of Chicago, Chicago, IL 60637, USA
    Am J Epidemiol 170:393-400. 2009
  3. pmc Population-specific genetic variants important in susceptibility to cytarabine arabinoside cytotoxicity
    Christine M Hartford
    Department of Pediatrics, University of Chicago, IL 60637, USA
    Blood 113:2145-53. 2009
  4. pmc SCAN: SNP and copy number annotation
    Eric R Gamazon
    Department of Medicine, The University of Chicago, Chicago, IL, USA
    Bioinformatics 26:259-62. 2010
  5. pmc PACdb: a database for cell-based pharmacogenomics
    Eric R Gamazon
    Department of Medicine, The University of Chicago, Chicago, IL 60637, USA
    Pharmacogenet Genomics 20:269-73. 2010
  6. pmc Platinum sensitivity-related germline polymorphism discovered via a cell-based approach and analysis of its association with outcome in ovarian cancer patients
    R Stephanie Huang
    Department of Medicine, University of Chicago, Chicago, Illinois 60637, USA
    Clin Cancer Res 17:5490-500. 2011
  7. pmc Expression and alternative splicing of folate pathway genes in HapMap lymphoblastoid cell lines
    Shiwei Duan
    The University of Chicago, Chicago, IL 60637, USA
    Pharmacogenomics 10:549-63. 2009
  8. pmc Identification of genomic regions contributing to etoposide-induced cytotoxicity
    Wasim K Bleibel
    Department of Medicine, University of Chicago, 5841 S Maryland Ave, Box MC2115, Chicago, IL 60637, USA
    Hum Genet 125:173-80. 2009
  9. pmc Genetic variants associated with carboplatin-induced cytotoxicity in cell lines derived from Africans
    R Stephanie Huang
    Department of Medicine, University of Chicago, 5841 South Maryland Avenue, Box MC2115, Chicago, IL 60637, USA
    Mol Cancer Ther 7:3038-46. 2008

Collaborators

Detail Information

Publications9

  1. pmc Ulcerative colitis-risk loci on chromosomes 1p36 and 12q15 found by genome-wide association study
    Mark S Silverberg
    Mount Sinai Hospital Inflammatory Bowel Disease Group, University of Toronto, 600 University Avenue, Toronto, ON M5G1X5, Canada
    Nat Genet 41:216-20. 2009
    ..0 x 10(-16), combined OR = 0.66) and at the IL23R locus on chromosome 1p31 (rs11209026, combined P = 1.3 x 10(-8), combined OR = 0.56; rs10889677, combined P = 1.3 x 10(-8), combined OR = 1.29)...
  2. pmc Using cases and parents to study multiplicative gene-by-environment interaction
    Emily O Kistner
    Department of Health Studies, Division of Biological Sciences, The University of Chicago, Chicago, IL 60637, USA
    Am J Epidemiol 170:393-400. 2009
    ..To illustrate, the authors consider polymorphisms in detoxification pathway genes and maternal smoking in relation to the birth defect oral cleft...
  3. pmc Population-specific genetic variants important in susceptibility to cytarabine arabinoside cytotoxicity
    Christine M Hartford
    Department of Pediatrics, University of Chicago, IL 60637, USA
    Blood 113:2145-53. 2009
    ..These unique genetic signatures comprise novel genes that can now be studied further in functional studies...
  4. pmc SCAN: SNP and copy number annotation
    Eric R Gamazon
    Department of Medicine, The University of Chicago, Chicago, IL, USA
    Bioinformatics 26:259-62. 2010
    ....
  5. pmc PACdb: a database for cell-based pharmacogenomics
    Eric R Gamazon
    Department of Medicine, The University of Chicago, Chicago, IL 60637, USA
    Pharmacogenet Genomics 20:269-73. 2010
    ..PACdb will be regularly updated to include more drugs and new datasets (e.g. baseline microRNA levels). PACdb will be linked into PharmGKB to benefit the next wave of pharmacogenetic and pharmacogenomic discovery...
  6. pmc Platinum sensitivity-related germline polymorphism discovered via a cell-based approach and analysis of its association with outcome in ovarian cancer patients
    R Stephanie Huang
    Department of Medicine, University of Chicago, Chicago, Illinois 60637, USA
    Clin Cancer Res 17:5490-500. 2011
    ..Cell-based approaches were used to identify genetic markers predictive of patients' risk for poor response prior to chemotherapy...
  7. pmc Expression and alternative splicing of folate pathway genes in HapMap lymphoblastoid cell lines
    Shiwei Duan
    The University of Chicago, Chicago, IL 60637, USA
    Pharmacogenomics 10:549-63. 2009
    ..In this study, we evaluate the genetic regulation for expression and alternative splicing of folate related genes in HapMap lymphoblastoid cell lines (LCLs) of individuals of European and African descent...
  8. pmc Identification of genomic regions contributing to etoposide-induced cytotoxicity
    Wasim K Bleibel
    Department of Medicine, University of Chicago, 5841 S Maryland Ave, Box MC2115, Chicago, IL 60637, USA
    Hum Genet 125:173-80. 2009
    ..Our findings suggest that susceptibility to etoposide-induced cytotoxicity is heritable and using an integrated genomics approach we identified both genomic regions and SNPs associated with the cytotoxic phenotypes...
  9. pmc Genetic variants associated with carboplatin-induced cytotoxicity in cell lines derived from Africans
    R Stephanie Huang
    Department of Medicine, University of Chicago, 5841 South Maryland Avenue, Box MC2115, Chicago, IL 60637, USA
    Mol Cancer Ther 7:3038-46. 2008
    ..The identification of concentration specific genetic signatures allows for potential integration of pharmacokinetics, pharmacodynamics, and pharmacogenetics in tailoring chemotherapy...