Katerina Kechris

Summary

Affiliation: University of Colorado Denver
Country: USA

Publications

  1. pmc Genetical genomic determinants of alcohol consumption in rats and humans
    Boris Tabakoff
    Department of Pharmacology, University of Colorado, Denver, Aurora, CO, USA
    BMC Biol 7:70. 2009
  2. pmc Prediction of alternatively skipped exons and splicing enhancers from exon junction arrays
    Katerina Kechris
    Department of Biostatistics and Informatics, Colorado School of Public Health, University of Colorado Denver, 4200 East 9th Avenue, B 119, Denver, CO 80262, USA
    BMC Genomics 9:551. 2008
  3. pmc c-REDUCE: incorporating sequence conservation to detect motifs that correlate with expression
    Katerina Kechris
    Department of Biostatistics and Informatics, Colorado School of Public Health, University of Colorado Denver, 4200 East Ninth Avenue, B 119, Denver, CO 80262, USA
    BMC Bioinformatics 9:506. 2008
  4. pmc Generalizing moving averages for tiling arrays using combined p-value statistics
    Katerina J Kechris
    University of Colorado Denver, CO, USA
    Stat Appl Genet Mol Biol 9:Article29. 2010
  5. pmc MSPrep--summarization, normalization and diagnostics for processing of mass spectrometry-based metabolomic data
    Grant Hughes
    Department of Biostatistics and Informatics, University of Colorado School of Public Health, Aurora, CO, Department of Immunology, National Jewish Health Center, Denver, CO, Department of Medicine, Indiana University School of Medicine, Indianapolis, IN and Department of Pulmonary Medicine, National Jewish Health Center, Denver, CO, USA
    Bioinformatics 30:133-4. 2014

Collaborators

Detail Information

Publications5

  1. pmc Genetical genomic determinants of alcohol consumption in rats and humans
    Boris Tabakoff
    Department of Pharmacology, University of Colorado, Denver, Aurora, CO, USA
    BMC Biol 7:70. 2009
    ....
  2. pmc Prediction of alternatively skipped exons and splicing enhancers from exon junction arrays
    Katerina Kechris
    Department of Biostatistics and Informatics, Colorado School of Public Health, University of Colorado Denver, 4200 East 9th Avenue, B 119, Denver, CO 80262, USA
    BMC Genomics 9:551. 2008
    ..Predictions based on our method are compared against controls and their sequences are analyzed to identify motifs important for regulating alternative splicing...
  3. pmc c-REDUCE: incorporating sequence conservation to detect motifs that correlate with expression
    Katerina Kechris
    Department of Biostatistics and Informatics, Colorado School of Public Health, University of Colorado Denver, 4200 East Ninth Avenue, B 119, Denver, CO 80262, USA
    BMC Bioinformatics 9:506. 2008
    ..Correlation-based motif finding strategies are used to identify motifs that correlate with expression data and do not rely on promoter sequences from a pre-determined set of genes...
  4. pmc Generalizing moving averages for tiling arrays using combined p-value statistics
    Katerina J Kechris
    University of Colorado Denver, CO, USA
    Stat Appl Genet Mol Biol 9:Article29. 2010
    ..We also present an application for the generalization of the moving average based on integrating two different tiling array experiments...
  5. pmc MSPrep--summarization, normalization and diagnostics for processing of mass spectrometry-based metabolomic data
    Grant Hughes
    Department of Biostatistics and Informatics, University of Colorado School of Public Health, Aurora, CO, Department of Immunology, National Jewish Health Center, Denver, CO, Department of Medicine, Indiana University School of Medicine, Indianapolis, IN and Department of Pulmonary Medicine, National Jewish Health Center, Denver, CO, USA
    Bioinformatics 30:133-4. 2014
    ..We developed the MSPrep R package to complement other packages by providing these additional steps, implementing a selection of popular normalization algorithms and generating diagnostics to help guide investigators in their analyses...