Affiliation: University of Colorado Denver
- Genetical genomic determinants of alcohol consumption in rats and humansBoris Tabakoff
Department of Pharmacology, University of Colorado, Denver, Aurora, CO, USA
BMC Biol 7:70. 2009....
- Prediction of alternatively skipped exons and splicing enhancers from exon junction arraysKaterina Kechris
Department of Biostatistics and Informatics, Colorado School of Public Health, University of Colorado Denver, 4200 East 9th Avenue, B 119, Denver, CO 80262, USA
BMC Genomics 9:551. 2008..Predictions based on our method are compared against controls and their sequences are analyzed to identify motifs important for regulating alternative splicing...
- c-REDUCE: incorporating sequence conservation to detect motifs that correlate with expressionKaterina Kechris
Department of Biostatistics and Informatics, Colorado School of Public Health, University of Colorado Denver, 4200 East Ninth Avenue, B 119, Denver, CO 80262, USA
BMC Bioinformatics 9:506. 2008..Correlation-based motif finding strategies are used to identify motifs that correlate with expression data and do not rely on promoter sequences from a pre-determined set of genes...
- Generalizing moving averages for tiling arrays using combined p-value statisticsKaterina J Kechris
University of Colorado Denver, CO, USA
Stat Appl Genet Mol Biol 9:Article29. 2010..We also present an application for the generalization of the moving average based on integrating two different tiling array experiments...