Jeffrey D Jensen

Summary

Affiliation: University of California
Country: USA

Publications

  1. pmc Similar levels of X-linked and autosomal nucleotide variation in African and non-African populations of Drosophila melanogaster
    Nadia D Singh
    Department of Biological Sciences, Stanford University, Stanford, CA 94305 USA
    BMC Evol Biol 7:202. 2007
  2. pmc An approximate bayesian estimator suggests strong, recurrent selective sweeps in Drosophila
    Jeffrey D Jensen
    Section of Ecology, Behavior and Evolution, University of California San Diego, La Jolla, California, United States of America
    PLoS Genet 4:e1000198. 2008
  3. doi request reprint Inferring selection in partially sequenced regions
    Jeffrey D Jensen
    Department of Molecular Biology and Genetics, Cornell University, USA
    Mol Biol Evol 25:438-46. 2008
  4. pmc On the utility of linkage disequilibrium as a statistic for identifying targets of positive selection in nonequilibrium populations
    Jeffrey D Jensen
    Department of Biological Statistics and Computational Biology, Cornell University, Ithaca, NY 14853, USA
    Genetics 176:2371-9. 2007
  5. pmc Patterns of sequence variability and divergence at the diminutive gene region of Drosophila melanogaster: complex patterns suggest an ancestral selective sweep
    Jeffrey D Jensen
    Department of Molecular Biology and Genetics, Cornell University, Ithaca, New York 14853, USA
    Genetics 177:1071-85. 2007
  6. pmc Accelerated adaptive evolution on a newly formed X chromosome
    Doris Bachtrog
    Department of Integrative Biology, University of California, Berkeley, Berkeley, California, USA
    PLoS Biol 7:e82. 2009
  7. pmc Distinguishing between selective sweeps and demography using DNA polymorphism data
    Jeffrey D Jensen
    Department of Molecular Biology and Genetics, Cornell University, Ithaca, New York 14853, USA
    Genetics 170:1401-10. 2005
  8. pmc Controlling the false-positive rate in multilocus genome scans for selection
    Kevin R Thornton
    Department of Molecular Biology and Genetics, Cornell University, Ithaca, New York 14853, USA
    Genetics 175:737-50. 2007
  9. ncbi request reprint Approaches for identifying targets of positive selection
    Jeffrey D Jensen
    Department of Molecular Biology and Genetics, Biotechnology Building, Cornell University, Ithaca, NY 14853, USA
    Trends Genet 23:568-77. 2007
  10. pmc Phylogenetic incongruence in the Drosophila melanogaster species group
    Alex Wong
    Department of Molecular Biology and Genetics, Biotechnology Building, Cornell University, Ithaca, NY 14853, USA
    Mol Phylogenet Evol 43:1138-50. 2007

Detail Information

Publications10

  1. pmc Similar levels of X-linked and autosomal nucleotide variation in African and non-African populations of Drosophila melanogaster
    Nadia D Singh
    Department of Biological Sciences, Stanford University, Stanford, CA 94305 USA
    BMC Evol Biol 7:202. 2007
    ..Comparisons of X-linked and autosomal diversity have yielded results largely dependent on population of origin...
  2. pmc An approximate bayesian estimator suggests strong, recurrent selective sweeps in Drosophila
    Jeffrey D Jensen
    Section of Ecology, Behavior and Evolution, University of California San Diego, La Jolla, California, United States of America
    PLoS Genet 4:e1000198. 2008
    ..It will thus be of great interest to apply this method to emerging whole-genome polymorphism data sets in many taxa...
  3. doi request reprint Inferring selection in partially sequenced regions
    Jeffrey D Jensen
    Department of Molecular Biology and Genetics, Cornell University, USA
    Mol Biol Evol 25:438-46. 2008
    ..Additionally, we examine the performance of a commonly used test of selection under a variety of recurrent and single sweep models...
  4. pmc On the utility of linkage disequilibrium as a statistic for identifying targets of positive selection in nonequilibrium populations
    Jeffrey D Jensen
    Department of Biological Statistics and Computational Biology, Cornell University, Ithaca, NY 14853, USA
    Genetics 176:2371-9. 2007
    ..Most notably, for demographic parameters relevant to non-African populations of Drosophila melanogaster, we demonstrate that selected loci are distinguishable from neutral loci using this statistic...
  5. pmc Patterns of sequence variability and divergence at the diminutive gene region of Drosophila melanogaster: complex patterns suggest an ancestral selective sweep
    Jeffrey D Jensen
    Department of Molecular Biology and Genetics, Cornell University, Ithaca, New York 14853, USA
    Genetics 177:1071-85. 2007
    ....
  6. pmc Accelerated adaptive evolution on a newly formed X chromosome
    Doris Bachtrog
    Department of Integrative Biology, University of California, Berkeley, Berkeley, California, USA
    PLoS Biol 7:e82. 2009
    ....
  7. pmc Distinguishing between selective sweeps and demography using DNA polymorphism data
    Jeffrey D Jensen
    Department of Molecular Biology and Genetics, Cornell University, Ithaca, New York 14853, USA
    Genetics 170:1401-10. 2005
    ....
  8. pmc Controlling the false-positive rate in multilocus genome scans for selection
    Kevin R Thornton
    Department of Molecular Biology and Genetics, Cornell University, Ithaca, New York 14853, USA
    Genetics 175:737-50. 2007
    ..5 kbp) in genome-scan studies leads to more power to detect recent selective sweeps...
  9. ncbi request reprint Approaches for identifying targets of positive selection
    Jeffrey D Jensen
    Department of Molecular Biology and Genetics, Biotechnology Building, Cornell University, Ithaca, NY 14853, USA
    Trends Genet 23:568-77. 2007
    ....
  10. pmc Phylogenetic incongruence in the Drosophila melanogaster species group
    Alex Wong
    Department of Molecular Biology and Genetics, Biotechnology Building, Cornell University, Ithaca, NY 14853, USA
    Mol Phylogenet Evol 43:1138-50. 2007
    ..Such lineage sorting may lead to biased estimation of tree topology and evolutionary rates, and may confound inferences of positive selection...