Glenn Hickey

Summary

Affiliation: University of California
Country: USA

Publications

  1. pmc HAL: a hierarchical format for storing and analyzing multiple genome alignments
    Glenn Hickey
    Center for Biomolecular Science and Engineering, University of California Santa Cruz, Santa Cruz CA 95064, USA
    Bioinformatics 29:1341-2. 2013
  2. doi request reprint A probabilistic model for sequence alignment with context-sensitive indels
    Glenn Hickey
    Center for Biomolecular Science and Engineering, University of California, Santa Cruz, California 95064, USA
    J Comput Biol 18:1449-64. 2011
  3. pmc A unifying model of genome evolution under parsimony
    Benedict Paten
    University of California, Santa Cruz, 1156 High St, 95064 Santa Cruz, USA
    BMC Bioinformatics 15:206. 2014

Detail Information

Publications3

  1. pmc HAL: a hierarchical format for storing and analyzing multiple genome alignments
    Glenn Hickey
    Center for Biomolecular Science and Engineering, University of California Santa Cruz, Santa Cruz CA 95064, USA
    Bioinformatics 29:1341-2. 2013
    ..This loss of information grows with the number of species under comparison, as well as their phylogenetic distance...
  2. doi request reprint A probabilistic model for sequence alignment with context-sensitive indels
    Glenn Hickey
    Center for Biomolecular Science and Engineering, University of California, Santa Cruz, California 95064, USA
    J Comput Biol 18:1449-64. 2011
    ..Fine-grained studies of small functional regions or disease markers, for example, could be significantly improved by our method. The implementation is available at www.mcb.mcgill.ca/~blanchem/software.html...
  3. pmc A unifying model of genome evolution under parsimony
    Benedict Paten
    University of California, Santa Cruz, 1156 High St, 95064 Santa Cruz, USA
    BMC Bioinformatics 15:206. 2014
    ..Parsimony and maximum likelihood methods of phylogenetic tree estimation and parsimony methods for genome rearrangements are central to the study of genome evolution yet to date they have largely been pursued in isolation...