Tanja M Gruber

Summary

Affiliation: University of California
Country: USA

Publications

  1. ncbi Assay of Escherichia coli RNA polymerase: sigma-core interactions
    Tanja M Gruber
    Departments of Stomatology and Microbiology and Immunalogy, University of California, San Francisco, California 94143-0512, USA
    Methods Enzymol 370:206-12. 2003
  2. ncbi Multiple sigma subunits and the partitioning of bacterial transcription space
    Tanja M Gruber
    Department of Microbiology and Immunology, University of California, Genentech Hall, 600 16th St, San Francisco, San Francisco, California 94143, USA
    Annu Rev Microbiol 57:441-66. 2003
  3. ncbi Minimal machinery of RNA polymerase holoenzyme sufficient for promoter melting
    Brian A Young
    Departments of Stomatology and Microbiology and Immunology, University of California, San Francisco, San Francisco, CA 94143, USA
    Science 303:1382-4. 2004
  4. ncbi Views of transcription initiation
    Brian A Young
    Department of Biochemistry and Biophysics, University of California, San Francisco, 94143, USA
    Cell 109:417-20. 2002
  5. ncbi A hydrophobic patch on the flap-tip helix of E.coli RNA polymerase mediates sigma(70) region 4 function
    Kati Geszvain
    Department of Genetics, University of Wisconsin Madison, Madison, WI 53706, USA
    J Mol Biol 343:569-87. 2004
  6. ncbi Autoregulation of a bacterial sigma factor explored by using segmental isotopic labeling and NMR
    Julio A Camarero
    Laboratory of Synthetic Protein Chemistry, The Rockefeller University, New York, NY 10021, USA
    Proc Natl Acad Sci U S A 99:8536-41. 2002
  7. ncbi The complete genome sequence of Chlorobium tepidum TLS, a photosynthetic, anaerobic, green-sulfur bacterium
    Jonathan A Eisen
    The Institute for Genomic Research, 9712 Medical Center Drive, Rockville, MD 20850, USA
    Proc Natl Acad Sci U S A 99:9509-14. 2002
  8. ncbi Crystal structure of Escherichia coli sigmaE with the cytoplasmic domain of its anti-sigma RseA
    Elizabeth A Campbell
    Laboratory of Molecular Biophysics, The Rockefeller University, 1230 York Avenue, New York, New York 10021, USA
    Mol Cell 11:1067-78. 2003
  9. ncbi Group 3 sigma factors in the marine cyanobacterium Synechococcus sp. strain PCC 7002 are required for growth at low temperature
    Kaori Inoue-Sakamoto
    Department of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, University Park, PA 16802, USA
    J Gen Appl Microbiol 53:89-104. 2007

Collaborators

Detail Information

Publications9

  1. ncbi Assay of Escherichia coli RNA polymerase: sigma-core interactions
    Tanja M Gruber
    Departments of Stomatology and Microbiology and Immunalogy, University of California, San Francisco, California 94143-0512, USA
    Methods Enzymol 370:206-12. 2003
  2. ncbi Multiple sigma subunits and the partitioning of bacterial transcription space
    Tanja M Gruber
    Department of Microbiology and Immunology, University of California, Genentech Hall, 600 16th St, San Francisco, San Francisco, California 94143, USA
    Annu Rev Microbiol 57:441-66. 2003
    ..We use the sigma repertoire of Escherichia coli, Bacillus subtilis, Streptomyces coelicolor, and cyanobacteria to illustrate the different strategies utilized to organize transcriptional space using multiple sigma factors...
  3. ncbi Minimal machinery of RNA polymerase holoenzyme sufficient for promoter melting
    Brian A Young
    Departments of Stomatology and Microbiology and Immunology, University of California, San Francisco, San Francisco, CA 94143, USA
    Science 303:1382-4. 2004
    ..Our results support the model that capture of nontemplate bases extruded from the DNA helix underlies the melting process...
  4. ncbi Views of transcription initiation
    Brian A Young
    Department of Biochemistry and Biophysics, University of California, San Francisco, 94143, USA
    Cell 109:417-20. 2002
    ..Recent structural studies reveal the nature of the initiating complex and suggest new ways of accomplishing the processes required for initiation...
  5. ncbi A hydrophobic patch on the flap-tip helix of E.coli RNA polymerase mediates sigma(70) region 4 function
    Kati Geszvain
    Department of Genetics, University of Wisconsin Madison, Madison, WI 53706, USA
    J Mol Biol 343:569-87. 2004
    ..Our studies failed to detect any role for sigma region 1.1 in establishing or maintaining the flap-sigma region 4 interaction, consistent with recent reports placing sigma region 1.1 in the downstream DNA channel...
  6. ncbi Autoregulation of a bacterial sigma factor explored by using segmental isotopic labeling and NMR
    Julio A Camarero
    Laboratory of Synthetic Protein Chemistry, The Rockefeller University, New York, NY 10021, USA
    Proc Natl Acad Sci U S A 99:8536-41. 2002
    ..More generally, the present work illustrates the power of segmental isotopic labeling for probing molecular interactions in large proteins by NMR...
  7. ncbi The complete genome sequence of Chlorobium tepidum TLS, a photosynthetic, anaerobic, green-sulfur bacterium
    Jonathan A Eisen
    The Institute for Genomic Research, 9712 Medical Center Drive, Rockville, MD 20850, USA
    Proc Natl Acad Sci U S A 99:9509-14. 2002
    ..tepidum and many Archaeal species...
  8. ncbi Crystal structure of Escherichia coli sigmaE with the cytoplasmic domain of its anti-sigma RseA
    Elizabeth A Campbell
    Laboratory of Molecular Biophysics, The Rockefeller University, 1230 York Avenue, New York, New York 10021, USA
    Mol Cell 11:1067-78. 2003
    ..In combination with a model of the sigma(E) holoenzyme and biochemical data, the structure reveals that RseA functions by sterically occluding the two primary binding determinants on sigma(E) for core RNA polymerase...
  9. ncbi Group 3 sigma factors in the marine cyanobacterium Synechococcus sp. strain PCC 7002 are required for growth at low temperature
    Kaori Inoue-Sakamoto
    Department of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, University Park, PA 16802, USA
    J Gen Appl Microbiol 53:89-104. 2007
    ....