- MicrobesFlux: a web platform for drafting metabolic models from the KEGG databaseXueyang Feng
Department of Energy, Environmental and Chemical Engineering, Washington University, Saint Louis, MO 63130, USA
BMC Syst Biol 6:94. 2012....
- Metabolic pathway determination and flux analysis in nonmodel microorganisms through 13C-isotope labelingXueyang Feng
Department of Energy, Environmental and Chemical Engineering, Washington University, St Louis, MO, USA
Methods Mol Biol 881:309-30. 2012..This protocol provides complementary information to the recently published protocol for (13)C-based metabolic flux analysis of the model species Escherichia coli (Nat Protoc 4:878-892, 2009)...
- Integrating flux balance analysis into kinetic models to decipher the dynamic metabolism of Shewanella oneidensis MR-1Xueyang Feng
Department of Energy, Environmental and Chemical Engineering, Washington University, St Louis, Missouri, USA
PLoS Comput Biol 8:e1002376. 2012..fluxes in the pentose phosphate pathway and gluconeogenesis were stable in the exponential growth period; and 3. the glyoxylate shunt was up-regulated when acetate became the main carbon source for MR-1 growth...