David D Dunigan

Summary

Affiliation: University of Nebraska
Country: USA

Publications

  1. pmc Towards defining the chloroviruses: a genomic journey through a genus of large DNA viruses
    Adrien Jeanniard
    Information Génomique and Structurale, IGS UMR7256, CNRS, Aix Marseille Universite, FR 13288, Marseille, France
    BMC Genomics 14:158. 2013
  2. pmc Paramecium bursaria chlorella virus 1 proteome reveals novel architectural and regulatory features of a giant virus
    David D Dunigan
    Department of Plant Pathology, University of Nebraska Lincoln, Lincoln, Nebraska, USA
    J Virol 86:8821-34. 2012
  3. ncbi request reprint Phycodnaviruses: a peek at genetic diversity
    David D Dunigan
    Department of Plant Pathology, University of Nebraska Lincoln, Lincoln, NE 68583 0722, USA
    Virus Res 117:119-32. 2006
  4. doi request reprint Evaluation of higher plant virus resistance genes in the green alga, Chlorella variabilis NC64A, during the early phase of infection with Paramecium bursaria chlorella virus-1
    Janet M Rowe
    Department of Plant Pathology, University of Nebraska, Lincoln, NE 68583 0900, United States
    Virology 442:101-13. 2013
  5. doi request reprint Chlorella viruses encode most, if not all, of the machinery to glycosylate their glycoproteins independent of the endoplasmic reticulum and Golgi
    James L Van Etten
    Department of Plant Pathology and Nebraska Center for Virology, University of Nebraska, Lincoln, NE 68583 0900, USA
    Biochim Biophys Acta 1800:152-9. 2010
  6. pmc DNA viruses: the really big ones (giruses)
    James L Van Etten
    Department of Plant Pathology, University of Nebraska, Lincoln, Nebraska 68583, USA
    Annu Rev Microbiol 64:83-99. 2010
  7. pmc Microarray analysis of Paramecium bursaria chlorella virus 1 transcription
    Giane M Yanai-Balser
    Nebraska Center for Virology, University of Nebraska, Lincoln, NE 68583 0900, USA
    J Virol 84:532-42. 2010
  8. pmc Chloroviruses: not your everyday plant virus
    James L Van Etten
    Department of Plant Pathology and Nebraska Center for Virology, University of Nebraska, Lincoln, NE 68583 0900, USA
    Trends Plant Sci 17:1-8. 2012
  9. pmc Virion-associated restriction endonucleases of chloroviruses
    Irina V Agarkova
    Department of Plant Pathology and Nebraska Center for Virology, University of Nebraska, Lincoln, NE 68583 0722, USA
    J Virol 80:8114-23. 2006
  10. pmc Chloroviruses encode a bifunctional dCMP-dCTP deaminase that produces two key intermediates in dTTP formation
    Yuanzheng Zhang
    Department of Plant Pathology, University of Nebraska Lincoln, Lincoln, NE 68583 0722, USA
    J Virol 81:7662-71. 2007

Collaborators

  • Jean Michel Claverie
  • Guillaume Blanc
  • Dong Wang
  • Jared C Roach
  • Xiao Li
  • James L Van Etten
  • Irina V Agarkova
  • James R Gurnon
  • Giane M Yanai-Balser
  • Adrien Jeanniard
  • Janet M Rowe
  • Garry Duncan
  • Yuanzheng Zhang
  • O William McClung
  • Yuannan Xia
  • Megan Larsen
  • Jason Vitek
  • Ming Kang
  • Leslie C Lane
  • Garry A Duncan
  • James D Eudy
  • Michael V Graves
  • Gladys F Maley
  • Frank Maley

Detail Information

Publications10

  1. pmc Towards defining the chloroviruses: a genomic journey through a genus of large DNA viruses
    Adrien Jeanniard
    Information Génomique and Structurale, IGS UMR7256, CNRS, Aix Marseille Universite, FR 13288, Marseille, France
    BMC Genomics 14:158. 2013
    ..These new data allowed us to analyze the genomic landscape of 41 chloroviruses, which revealed some remarkable features about these viruses...
  2. pmc Paramecium bursaria chlorella virus 1 proteome reveals novel architectural and regulatory features of a giant virus
    David D Dunigan
    Department of Plant Pathology, University of Nebraska Lincoln, Lincoln, Nebraska, USA
    J Virol 86:8821-34. 2012
    ..The genes encoding these proteins are dispersed throughout the virus genome, and most are transcribed late or early-late in the infection cycle, which is consistent with virion morphogenesis...
  3. ncbi request reprint Phycodnaviruses: a peek at genetic diversity
    David D Dunigan
    Department of Plant Pathology, University of Nebraska Lincoln, Lincoln, NE 68583 0722, USA
    Virus Res 117:119-32. 2006
    ..Little is known about the replication of these viruses, but the consequences of these infections of the phytoplankton have global affects, including altered geochemical cycling and weather patterns...
  4. doi request reprint Evaluation of higher plant virus resistance genes in the green alga, Chlorella variabilis NC64A, during the early phase of infection with Paramecium bursaria chlorella virus-1
    Janet M Rowe
    Department of Plant Pathology, University of Nebraska, Lincoln, NE 68583 0900, United States
    Virology 442:101-13. 2013
    ..To our knowledge this is the first examination of RNA silencing genes in algae beyond core proteins, and the first analysis of their transcription during virus infection...
  5. doi request reprint Chlorella viruses encode most, if not all, of the machinery to glycosylate their glycoproteins independent of the endoplasmic reticulum and Golgi
    James L Van Etten
    Department of Plant Pathology and Nebraska Center for Virology, University of Nebraska, Lincoln, NE 68583 0900, USA
    Biochim Biophys Acta 1800:152-9. 2010
    ..Furthermore, all experimental results indicate that glycosylation occurs independent of the endoplasmic reticulum and Golgi...
  6. pmc DNA viruses: the really big ones (giruses)
    James L Van Etten
    Department of Plant Pathology, University of Nebraska, Lincoln, Nebraska 68583, USA
    Annu Rev Microbiol 64:83-99. 2010
    ..This review focuses on some of these differences than on extensive details about individual viruses...
  7. pmc Microarray analysis of Paramecium bursaria chlorella virus 1 transcription
    Giane M Yanai-Balser
    Nebraska Center for Virology, University of Nebraska, Lincoln, NE 68583 0900, USA
    J Virol 84:532-42. 2010
    ..This study provides the first comprehensive evaluation of virus gene expression during the PBCV-1 life cycle...
  8. pmc Chloroviruses: not your everyday plant virus
    James L Van Etten
    Department of Plant Pathology and Nebraska Center for Virology, University of Nebraska, Lincoln, NE 68583 0900, USA
    Trends Plant Sci 17:1-8. 2012
    ..About 40% of the PBCV-1 encoded proteins resemble proteins of known function including many that are completely unexpected for a virus. In many respects, chlorovirus infection resembles bacterial infection by tailed bacteriophages...
  9. pmc Virion-associated restriction endonucleases of chloroviruses
    Irina V Agarkova
    Department of Plant Pathology and Nebraska Center for Virology, University of Nebraska, Lincoln, NE 68583 0722, USA
    J Virol 80:8114-23. 2006
    ..These immediate-early events associated with chlorovirus infections may facilitate rapid switching of the host transcriptional apparatus to viral transcription, which begins within 5 to 10 min p.i...
  10. pmc Chloroviruses encode a bifunctional dCMP-dCTP deaminase that produces two key intermediates in dTTP formation
    Yuanzheng Zhang
    Department of Plant Pathology, University of Nebraska Lincoln, Lincoln, NE 68583 0722, USA
    J Virol 81:7662-71. 2007
    ..Zhang, H. Moriyama, K. Homma, and J. L. Van Etten, J. Virol. 79:9945-9953, 2005), means that PBCV-1 is the first virus to encode enzymes involved in all three known pathways to form dUMP...