J Dubcovsky

Summary

Affiliation: University of California
Country: USA

Publications

  1. pmc Increased copy number at the HvFT1 locus is associated with accelerated flowering time in barley
    Rebecca Nitcher
    Department of Plant Sciences, University of California, Davis, Davis, CA 95616, USA
    Mol Genet Genomics 288:261-75. 2013
  2. pmc Genome analyses of the wheat yellow (stripe) rust pathogen Puccinia striiformis f. sp. tritici reveal polymorphic and haustorial expressed secreted proteins as candidate effectors
    Dario Cantu
    John Innes Centre, Norwich Research Park, Norwich, UK
    BMC Genomics 14:270. 2013
  3. pmc Comparative analysis of protein-protein interactions in the defense response of rice and wheat
    Dario Cantu
    Department of Viticulture and Enology, University of California Davis, Davis, CA, USA
    BMC Genomics 14:166. 2013
  4. pmc Down-regulation of four putative arabinoxylan feruloyl transferase genes from family PF02458 reduces ester-linked ferulate content in rice cell walls
    Fernando Piston
    Department of Plant Sciences, University of California, One Shields Avenue, Mail Stop 1, Davis, CA 95616, USA
    Planta 231:677-91. 2010
  5. pmc Characterization of the maintained vegetative phase deletions from diploid wheat and their effect on VRN2 and FT transcript levels
    Assaf Distelfeld
    Department of Plant Sciences, University of California, Davis, CA 95616, USA
    Mol Genet Genomics 283:223-32. 2010
  6. pmc Control of flowering time and spike development in cereals: the earliness per se Eps-1 region in wheat, rice, and Brachypodium
    Maria E Faricelli
    Department of Plant Sciences, University of California, Mail Stop 1, One Shields Avenue, Davis, CA 95616 8780, USA
    Funct Integr Genomics 10:293-306. 2010
  7. pmc A modified TILLING approach to detect induced mutations in tetraploid and hexaploid wheat
    Cristobal Uauy
    Department of Plant Sciences, University of California, Davis, CA 95616, USA
    BMC Plant Biol 9:115. 2009
  8. pmc Small RNAs, DNA methylation and transposable elements in wheat
    Dario Cantu
    Department of Plant Sciences, University of California Davis, One Shields Ave, Davis, CA, USA
    BMC Genomics 11:408. 2010
  9. pmc Population- and genome-specific patterns of linkage disequilibrium and SNP variation in spring and winter wheat (Triticum aestivum L.)
    Shiaoman Chao
    USDA ARS Genotyping Laboratory, Biosciences Research Laboratory, Fargo, ND, USA
    BMC Genomics 11:727. 2010
  10. pmc Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes
    Eduard D Akhunov
    Department of Plant Sciences, University of California, Davis, CA 95616, USA
    BMC Genomics 11:702. 2010

Collaborators

Detail Information

Publications56

  1. pmc Increased copy number at the HvFT1 locus is associated with accelerated flowering time in barley
    Rebecca Nitcher
    Department of Plant Sciences, University of California, Davis, Davis, CA 95616, USA
    Mol Genet Genomics 288:261-75. 2013
    ..Our results, together with studies of other wheat and barley flowering genes, show that copy number variation plays an important role in the regulation of developmental processes in the temperate cereals...
  2. pmc Genome analyses of the wheat yellow (stripe) rust pathogen Puccinia striiformis f. sp. tritici reveal polymorphic and haustorial expressed secreted proteins as candidate effectors
    Dario Cantu
    John Innes Centre, Norwich Research Park, Norwich, UK
    BMC Genomics 14:270. 2013
    ..However, to date, our knowledge of the effector repertoire of cereal rust pathogens is limited...
  3. pmc Comparative analysis of protein-protein interactions in the defense response of rice and wheat
    Dario Cantu
    Department of Viticulture and Enology, University of California Davis, Davis, CA, USA
    BMC Genomics 14:166. 2013
    ..As entry points we selected proteins that serve as key regulators of the rice defense response: the RAR1/SGT1/HSP90 protein complex, NPR1, XA21, and XB12 (XA21 interacting protein 12)...
  4. pmc Down-regulation of four putative arabinoxylan feruloyl transferase genes from family PF02458 reduces ester-linked ferulate content in rice cell walls
    Fernando Piston
    Department of Plant Sciences, University of California, One Shields Avenue, Mail Stop 1, Davis, CA 95616, USA
    Planta 231:677-91. 2010
    ..0001). Therefore, our experimental results in rice support the bioinformatics prediction that members of family PF02458 are involved in the incorporation of FA into the cell wall in grasses...
  5. pmc Characterization of the maintained vegetative phase deletions from diploid wheat and their effect on VRN2 and FT transcript levels
    Assaf Distelfeld
    Department of Plant Sciences, University of California, Davis, CA 95616, USA
    Mol Genet Genomics 283:223-32. 2010
    ..Until the specific gene(s) responsible for the down-regulation of VRN2 and FT and the non-flowering phenotype are precisely identified, it is premature to use these results to postulate alternative flowering models...
  6. pmc Control of flowering time and spike development in cereals: the earliness per se Eps-1 region in wheat, rice, and Brachypodium
    Maria E Faricelli
    Department of Plant Sciences, University of California, Mail Stop 1, One Shields Avenue, Davis, CA 95616 8780, USA
    Funct Integr Genomics 10:293-306. 2010
    ..Future steps to clone the Eps-A ( m ) 1 gene include the generation of mot1 and ftsh4 mutants and the completion of the T. monococcum physical map to test for the presence of additional candidate genes...
  7. pmc A modified TILLING approach to detect induced mutations in tetraploid and hexaploid wheat
    Cristobal Uauy
    Department of Plant Sciences, University of California, Davis, CA 95616, USA
    BMC Plant Biol 9:115. 2009
    ..Despite this, few TILLING populations are currently available. In addition, current TILLING screening protocols require high-throughput genotyping platforms, limiting their use...
  8. pmc Small RNAs, DNA methylation and transposable elements in wheat
    Dario Cantu
    Department of Plant Sciences, University of California Davis, One Shields Ave, Davis, CA, USA
    BMC Genomics 11:408. 2010
    ..In this study, we report the distribution of these two types of sRNAs among the different classes of wheat TEs, the regions targeted within the TEs, and their impact on the methylation patterns of the targeted regions...
  9. pmc Population- and genome-specific patterns of linkage disequilibrium and SNP variation in spring and winter wheat (Triticum aestivum L.)
    Shiaoman Chao
    USDA ARS Genotyping Laboratory, Biosciences Research Laboratory, Fargo, ND, USA
    BMC Genomics 11:727. 2010
    ..Here, we used a genome-wide set of 1536 SNPs to study linkage disequilibrium (LD) and population structure in a panel of 478 spring and winter wheat cultivars (Triticum aestivum) from 17 populations across the United States and Mexico...
  10. pmc Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes
    Eduard D Akhunov
    Department of Plant Sciences, University of California, Davis, CA 95616, USA
    BMC Genomics 11:702. 2010
    ..dicoccoides, genomes AABB) from the putative site of wheat domestication in Turkey. Data are used to assess the distribution of diversity among and within wheat genomes and to develop a panel of SNP markers for polyploid wheat...
  11. ncbi request reprint Genome plasticity a key factor in the success of polyploid wheat under domestication
    Jorge Dubcovsky
    Department of Plant Sciences, University of California, One Shields Avenue, Davis, CA 95616, USA
    Science 316:1862-6. 2007
    ..Frequent gene deletions and disruptions generated by a fast replacement rate of repetitive sequences are buffered by the polyploid nature of wheat, resulting in subtle dosage effects on which selection can operate...
  12. ncbi request reprint Effect of photoperiod on the regulation of wheat vernalization genes VRN1 and VRN2
    Jorge Dubcovsky
    Department of Plant Sciences, University of California, Davis, CA 95616 8780, USA
    Plant Mol Biol 60:469-80. 2006
    ..The down-regulation of the VRN2 repressor by SD is likely part of the mechanism associated with the SD-LD regulation of flowering in photoperiod sensitive winter wheat...
  13. ncbi request reprint Genome analysis of South American Elymus (Triticeae) and Leymus (Triticeae) species based on variation in repeated nucleotide sequences
    J Dubcovsky
    Department of Agronomy and Range Science, University of California, Davis 95616, USA
    Genome 40:505-20. 1997
    ..erianthus and E. mendocinus and three species of Leymus. Based on genome constitution, morphology, and habitat, E. erianthus and E. mendocinus were transferred to the genus Leymus...
  14. pmc Effect of the down-regulation of the high Grain Protein Content (GPC) genes on the wheat transcriptome during monocarpic senescence
    Dario Cantu
    Department of Plant Sciences, University of California Davis, USA
    BMC Genomics 12:492. 2011
    ..At this early stage of senescence GPC transcript levels are significantly lower in transgenic GPC-RNAi plants than in the wild type, but there are still no visible phenotypic differences between genotypes...
  15. pmc A chromosome bin map of 2148 expressed sequence tag loci of wheat homoeologous group 7
    K G Hossain
    Department of Plant Sciences, North Dakota State University, Fargo, North Dakota 58105, USA
    Genetics 168:687-99. 2004
    ..Identification of landmark ESTs and development of consensus maps may provide a framework of conserved coding regions predating the evolution of wheat genomes...
  16. doi request reprint QTL analysis of pasta quality using a composite microsatellite and SNP map of durum wheat
    W Zhang
    Department of Plant Sciences, One Shields Av, University of California, Davis, CA 95616, USA
    Theor Appl Genet 117:1361-77. 2008
    ..71) and inversely correlated to cooking loss (R < -0.37). The location and effect of other QTLs affecting grain size and weight, gluten strength, mixing properties, and ash content are also discussed...
  17. pmc The wheat and barley vernalization gene VRN3 is an orthologue of FT
    L Yan
    Department of Plant Sciences, University of California, Davis, CA 95616, USA
    Proc Natl Acad Sci U S A 103:19581-6. 2006
    ..002). These results confirmed that the wheat and barley FT genes are responsible for natural allelic variation in vernalization requirement, providing additional sources of adaptive diversity to these economically important crops...
  18. pmc Genome comparisons reveal a dominant mechanism of chromosome number reduction in grasses and accelerated genome evolution in Triticeae
    M C Luo
    Department of Plant Sciences, University of California, Davis, CA 95616, USA
    Proc Natl Acad Sci U S A 106:15780-5. 2009
    ..tauschii chromosomes, suggesting that the dependence of synteny erosion on gene location along the centromere-telomere axis either evolved recently in the Triticeae phylogenetic lineage or its evolution was recently accelerated...
  19. ncbi request reprint Precise mapping of a locus affecting grain protein content in durum wheat
    S Olmos
    Department of Agronomy and Range Science, University of California, Davis 95616 8515, USA
    Theor Appl Genet 107:1243-51. 2003
    ....
  20. pmc Positional cloning of the wheat vernalization gene VRN1
    L Yan
    Department of Agronomy and Range Science, University of California, Davis 95616, USA
    Proc Natl Acad Sci U S A 100:6263-8. 2003
    ..A mutation in the promoter region of AP1 would result in the lack of recognition of the repressor and in a dominant spring growth habit...
  21. ncbi request reprint Allelic variation at the VRN-1 promoter region in polyploid wheat
    L Yan
    Department of Agronomy and Range Science, University of California, Davis, CA 95616, USA
    Theor Appl Genet 109:1677-86. 2004
    ..Based on these results, we concluded that the VRN-1 genes should have additional regulatory sites outside the promoter region studied here...
  22. pmc Genetic and molecular characterization of the VRN2 loci in tetraploid wheat
    Assaf Distelfeld
    Department of Plant Sciences, University of California, Davis, California 95616 8515, USA
    Plant Physiol 149:245-57. 2009
    ....
  23. pmc Comparative sequence analysis of colinear barley and rice bacterial artificial chromosomes
    J Dubcovsky
    Department of Agronomy and Range Science, University of California, Davis, CA 95616, USA
    Plant Physiol 125:1342-53. 2001
    ..The larger distances between the first three genes in barley compared with rice are explained by the insertion of different transposable retroelements...
  24. pmc A 2500-locus bin map of wheat homoeologous group 5 provides insights on gene distribution and colinearity with rice
    A M Linkiewicz
    Department of Agronomy and Range Science, University of California, Davis, California 95616, USA
    Genetics 168:665-76. 2004
    ..Statistically significant colinearity was observed between low-copy-number ESTs from wheat homoeologous group 5 and rice chromosomes 12 (88 ESTs), 9 (72 ESTs), and 3 (84 ESTs)...
  25. ncbi request reprint A microcolinearity study at the earliness per se gene Eps-A(m)1 region reveals an ancient duplication that preceded the wheat-rice divergence
    M Valarik
    Department of Plant Sciences, University of California, One Shields Avenue, Davis, CA 95616, USA
    Theor Appl Genet 112:945-57. 2006
    ..This comparative study provided sufficient markers to saturate the Eps-A(m)1 gene region and to precisely map this gene within a 0.9 cM interval flanked by the VatpC and Smp loci...
  26. ncbi request reprint The cold-regulated transcriptional activator Cbf3 is linked to the frost-tolerance locus Fr-A2 on wheat chromosome 5A
    A Vágújfalvi
    Department of Agronomy and Range Science, University of California, One Shields Avenue, Davis, CA 95616 8515, USA
    Mol Genet Genomics 269:60-7. 2003
    ....
  27. doi request reprint Association between allelic variation at the Phytoene synthase 1 gene and yellow pigment content in the wheat grain
    W Zhang
    Department of Plant Sciences, University of California, One Shields Avenue, Davis, CA 95616, USA
    Theor Appl Genet 116:635-45. 2008
    ..In summary, our results support the hypothesis that allelic differences in PSY-1 and at least one additional gene in the distal region of the long arm of homoeologous group 7L are associated with differences in GYPC...
  28. ncbi request reprint The wheat VRN2 gene is a flowering repressor down-regulated by vernalization
    Liuling Yan
    Department of Agronomy and Range Science, University of California, Davis, CA 95616, USA
    Science 303:1640-4. 2004
    ..Reduction of the RNA level of VRN2 by RNA interference accelerated the flowering time of transgenic winter-wheat plants by more than a month...
  29. doi request reprint Regulation of flowering in temperate cereals
    A Distelfeld
    Dept of Plant Sciences, University of California, Davis, CA, 95616, USA
    Curr Opin Plant Biol 12:178-84. 2009
    ..The vast number of HAP-CCT combinations can provide the flexibility required for integrating seasonal cues and different stress signals in the regulation of the transition to flowering...
  30. ncbi request reprint Construction and characterization of a half million clone BAC library of durum wheat ( Triticum turgidum ssp. durum)
    A Cenci
    Department of Agronomy and Range Science, University of California, One Shields Avenue, Davis, CA 95616 8515, USA
    Theor Appl Genet 107:931-9. 2003
    ..Clones and high-density filters can be requested at http://agronomy.ucdavis.edu/Dubcovsky/BAC-library/BAC_Langdon.htm..
  31. ncbi request reprint Dynamics of the evolution of orthologous and paralogous portions of a complex locus region in two genomes of allopolyploid wheat
    Xiu Ying Kong
    Genetic Resources Conservation Program, University of California, Davis, CA 95616, USA
    Plant Mol Biol 54:55-69. 2004
    ..The presence of four genes represented only in the Triticeae endosperm ESTs suggests an endosperm-specific chromosome domain...
  32. pmc Regulation of VRN-1 vernalization genes in normal and transgenic polyploid wheat
    Artem Loukoianov
    Department of Plant Sciences, University of California, Davis, California 95616, USA
    Plant Physiol 138:2364-73. 2005
    ..We hypothesize that the coordinated transcription of dominant and recessive alleles may contribute to an earlier attainment of the VRN-1 transcript level threshold required to trigger flowering initiation in polyploid wheat...
  33. ncbi request reprint Cereal genes similar to Snf2 define a new subfamily that includes human and mouse genes
    L Yan
    Dept of Agronomy and Range Science, One Shields Avenue, University of California, Davis, CA 95616, USA
    Mol Genet Genomics 268:488-99. 2002
    ..High-density genetic mapping and RT-PCR suggest that Snf2P is not a candidate gene for the tightly linked vernalization gene Vrn2...
  34. ncbi request reprint The high grain protein content gene Gpc-B1 accelerates senescence and has pleiotropic effects on protein content in wheat
    Cristobal Uauy
    Department of Plant Sciences, University of California, Davis, 95616, USA
    J Exp Bot 57:2785-94. 2006
    ..These results are consistent with a model in which the wild-type allele of Gpc-B1 accelerates senescence in flag leaves producing pleiotropic effects on nitrogen remobilization, total GPC, and grain size...
  35. ncbi request reprint Wheat VIN3-like PHD finger genes are up-regulated by vernalization
    Daolin Fu
    Department of Plant Sciences, University of California, One Shields Av, Davis, CA 95616, USA
    Mol Genet Genomics 277:301-13. 2007
    ..This study indicates that wheat VIL genes have retained a similar structure and transcriptional regulation as their Arabidopsis VIN3/VIL homologues, suggesting that they might have retained some of their functions...
  36. ncbi request reprint Large deletions within the first intron in VRN-1 are associated with spring growth habit in barley and wheat
    Daolin Fu
    Department of Plant Sciences, University of California, One Shields Av, Davis, CA 95616, USA
    Mol Genet Genomics 273:54-65. 2005
    ..Epistatic interactions between VRN-H2 and the VRN-H1 allele with the intron 1 deletion suggest that the deleted region may include a recognition site for the flowering repression mediated by the product of the VRN-H2 gene of barley...
  37. pmc Synteny perturbations between wheat homoeologous chromosomes caused by locus duplications and deletions correlate with recombination rates
    Eduard D Akhunov
    Department of Agronomy and Range Science, University of California, Davis, CA 95616, USA
    Proc Natl Acad Sci U S A 100:10836-41. 2003
    ..Synteny perturbations were characterized in 31 paralogous sets of loci with perturbed synteny. Both insertions and deletions of loci were detected and both preferentially occurred in high recombination regions of chromosomes...
  38. ncbi request reprint A cluster of 11 CBF transcription factors is located at the frost tolerance locus Fr-Am2 in Triticum monococcum
    Andrea K Miller
    Department of Plant Sciences, University of California, Davis, 95616, USA
    Mol Genet Genomics 275:193-203. 2006
    ..Lines carrying these recombination events will be useful to identify which of the CBF genes is responsible for the differences in frost tolerance between the T. monococcum parental lines at the Fr-A(m)2 locus...
  39. pmc The organization and rate of evolution of wheat genomes are correlated with recombination rates along chromosome arms
    Eduard D Akhunov
    Department of Agronomy and Range Science, University of California, Davis, California 95616, USA
    Genome Res 13:753-63. 2003
    ....
  40. ncbi request reprint Molecular characterization of durum and common wheat recombinant lines carrying leaf rust resistance (Lr19) and yellow pigment (Y) genes from Lophopyrum ponticum
    Wenjun Zhang
    Department of Plant Sciences, University of California Davis, One Shields Avenue, Davis, CA 95616, USA
    Theor Appl Genet 111:573-82. 2005
    ..This recombinant line can be used to improve leaf rust resistance without affecting flour color. The 7EL/7DL 1-96 recombinant chromosome did not show the meiotic self-elimination previously reported for a 7EL/7BL translocation...
  41. doi request reprint A kinase-START gene confers temperature-dependent resistance to wheat stripe rust
    Daolin Fu
    Department of Plant Sciences, University of California, Davis, CA 95616, USA
    Science 323:1357-60. 2009
    ..Yr36 is present in wild wheat but is absent in modern pasta and bread wheat varieties, and therefore it can now be used to improve resistance to stripe rust in a broad set of varieties...
  42. ncbi request reprint Molecular characterization of the duplicated meristem identity genes HvAP1a and HvAP1b in barley
    Liuling Yan
    Department of Plant Sciences, University of California Davis 95616, USA
    Genome 48:905-12. 2005
    ..In summary, this study contributed a detailed physical map of the barley VRN-H1 region, showed several structural differences with the orthologous wheat region, and clarified the identity of the barley VRN-H1 gene...
  43. ncbi request reprint A NAC Gene regulating senescence improves grain protein, zinc, and iron content in wheat
    Cristobal Uauy
    Department of Plant Sciences, University of California, One Shields Avenue, Davis, CA 95616, USA
    Science 314:1298-301. 2006
    ..Reduction in RNA levels of the multiple NAM homologs by RNA interference delayed senescence by more than 3 weeks and reduced wheat grain protein, zinc, and iron content by more than 30%...
  44. ncbi request reprint High-temperature adult-plant (HTAP) stripe rust resistance gene Yr36 from Triticum turgidum ssp. dicoccoides is closely linked to the grain protein content locus Gpc-B1
    Cristobal Uauy
    Department of Plant Sciences, University of California, Davis, CA 95616, USA
    Theor Appl Genet 112:97-105. 2005
    ..3-cM). Marker-assisted selection strategies are presented to improve stripe rust resistance and simultaneously select for high or low Gpc-B1 alleles...
  45. doi request reprint Wheat FT protein regulates VRN1 transcription through interactions with FDL2
    Chengxia Li
    Department of Plant Sciences, University of California, Davis, CA 95616, USA
    Plant J 55:543-54. 2008
    ..The high levels of TaFDL2 transcripts observed in wheat leaves provide a simple explanation for this difference. We present a hypothesis to explain the conservation of VRN1 expression in the leaves of temperate cereals...
  46. ncbi request reprint RNA interference for wheat functional gene analysis
    Daolin Fu
    Department of Plant Sciences, University of California, One Shields Av, Davis, CA 95616, USA
    Transgenic Res 16:689-701. 2007
    ..We also review recent examples of RNAi modification of important agronomic and quality traits in wheat and discuss future directions for this technology...
  47. pmc Comparative DNA sequence analysis of wheat and rice genomes
    Mark E Sorrells
    Department of Plant Breeding, Cornell University, Ithaca, New York 14853, USA
    Genome Res 13:1818-27. 2003
    ....
  48. ncbi request reprint Microcolinearity between a 2-cM region encompassing the grain protein content locus Gpc-6B1 on wheat chromosome 6B and a 350-kb region on rice chromosome 2
    Assaf Distelfeld
    Institute of Evolution, University of Haifa, Mount Carmel, 31905 Haifa, Israel
    Funct Integr Genomics 4:59-66. 2004
    ..These markers were used to map the Gpc-6B1 locus into a 0.3-cM interval flanked by PCR markers Xucw79 and Xucw71, and to identify five candidate genes within the colinear 64-kb region in rice...
  49. pmc Rapid genome divergence at orthologous low molecular weight glutenin loci of the A and Am genomes of wheat
    Thomas Wicker
    Institute of Plant Biology, University of Zurich, Switzerland
    Plant Cell 15:1186-97. 2003
    ..The striking differences in the intergenic landscape between the A and A(m) genomes that diverged 1 to 3 million years ago provide evidence for a dynamic and rapid genome evolution in wheat species...
  50. ncbi request reprint Genomic organization of the complex alpha-gliadin gene loci in wheat
    Yong Qiang Gu
    United States Department of Agriculture, Agricultural Research Service, Western Regional Research Center, 800 Buchanan Street, Albany, CA 94710, USA
    Theor Appl Genet 109:648-57. 2004
    ..Several mechanisms underlying the dynamic evolution of the Gli-2 loci are discussed...
  51. ncbi request reprint Molecular and structural characterization of barley vernalization genes
    Jarislav von Zitzewitz
    Department of Crop and Soil Science, Oregon State University, 253 Crop Science Building, Corvallis, OR 97331, USA
    Plant Mol Biol 59:449-67. 2005
    ..All reported barley vernalization QTLs can be explained by the two-locus VRN-H1/VRN-H2 model based on the presence/absence of VRN-H2 and a winter vs. spring HvBM5A allele...
  52. doi request reprint Identification of candidate CBF genes for the frost tolerance locus Fr-Am2 in Triticum monococcum
    Andrea K Knox
    Department of Horticulture and Crop Science, The Ohio State University OARDC, Wooster, OH 44691, USA
    Plant Mol Biol 67:257-70. 2008
    ..The non-functional TmCBF12 allele in DV92 can also contribute to its lower frost tolerance...
  53. ncbi request reprint The expression of several Cbf genes at the Fr-A2 locus is linked to frost resistance in wheat
    Attila Vágújfalvi
    Agricultural Research Institute of the Hungarian Academy of Sciences, 2462, Martonvasar, Hungary
    Mol Genet Genomics 274:506-14. 2005
    ..Differences in Cbf expression were also associated with a variation in frost tolerance. These results suggest that the amount of some Cbf mRNAs might be a critical factor for determining the level of frost tolerance in wheat...
  54. ncbi request reprint Physical map of the wheat high-grain protein content gene Gpc-B1 and development of a high-throughput molecular marker
    Assaf Distelfeld
    The Institute of Evolution, University of Haifa, Mount Carmel, Haifa 31905, Israel
    New Phytol 169:753-63. 2006
    ....
  55. pmc Different types and rates of genome evolution detected by comparative sequence analysis of orthologous segments from four cereal genomes
    Wusirika Ramakrishna
    Department of Biological Sciences, Purdue University, West Lafayette, Indiana 47907, USA
    Genetics 162:1389-400. 2002
    ..All but two of the retrotransposons were found in the regions between genes, while all but 2 of the 51 inverted repeat transposable elements were found as insertions in genic regions and outside the retrotransposon blocks...
  56. ncbi request reprint Transposable elements, genes and recombination in a 215-kb contig from wheat chromosome 5A(m)
    Phillip J SanMiguel
    Purdue Genomics Core Facility, 1057 WSLR, West Lafayette, IN 47907 1057, USA
    Funct Integr Genomics 2:70-80. 2002
    ..These results showed that the wheat genome is a complex mixture of different sequence elements, but with general patterns of content and interspersion that are similar to those seen in maize and barley...