Manhong Dai

Summary

Affiliation: University of Michigan
Country: USA

Publications

  1. pmc NGSQC: cross-platform quality analysis pipeline for deep sequencing data
    Manhong Dai
    Department of Psychiatry, University of Michigan, Ann Arbor, MI 48109, USA
    BMC Genomics 11:S7. 2010
  2. pmc Open Biomedical Ontology-based Medline exploration
    Weijian Xuan
    Psychiatry Department and Molecular and Behavioral Neuroscience Institute, University of Michigan, USA
    BMC Bioinformatics 10:S6. 2009
  3. pmc Cross-domain neurobiology data integration and exploration
    Weijian Xuan
    Psychiatry Department and Molecular and Behavioral Neuroscience Institute, University of Michigan, USA
    BMC Genomics 11:S6. 2010
  4. ncbi request reprint An active visual search interface for Medline
    Weijian Xuan
    Molecular and Behavioral Neuroscience Institute and Department of Psychiatry, University of Michigan, Ann Arbor, MI 48109, USA
    Comput Syst Bioinformatics Conf 6:359-69. 2007
  5. ncbi request reprint SNP Function Portal: a web database for exploring the function implication of SNP alleles
    Pinglang Wang
    Molecular and Behavioral Neuroscience Institute and Department of Psychiatry, University of Michigan, Ann Arbor, MI 48109, USA
    Bioinformatics 22:e523-9. 2006
  6. ncbi request reprint Supercomputing with toys: harnessing the power of NVIDIA 8800GTX and playstation 3 for bioinformatics problem
    Justin Wilson
    Molecular and Behavioral Neuroscience Institute and Department of Psychiatry, University of Michigan, Ann Arbor, MI 48109, USA
    Comput Syst Bioinformatics Conf 6:387-90. 2007
  7. pmc HIV infection reveals widespread expansion of novel centromeric human endogenous retroviruses
    Rafael Contreras-Galindo
    Department of Internal Medicine, and Programs in Immunology, Cancer Biology, and Cellular and Molecular Biology, University of Michigan, Ann Arbor, Michigan 48109, USA
    Genome Res 23:1505-13. 2013
  8. ncbi request reprint Web-based GeneChip analysis system for large-scale collaborative projects
    Manhong Dai
    Department of Psychiatry, Molecular and Behavioral Neuroscience Institute, University of Michigan, Ann Arbor, MI 48109, USA
    Bioinformatics 23:2185-7. 2007
  9. pmc Evolving gene/transcript definitions significantly alter the interpretation of GeneChip data
    Manhong Dai
    Molecular and Behavioural Neuroscience Institute and Department of Psychiatry, University of Michigan, Ann Arbor, MI 48109, USA
    Nucleic Acids Res 33:e175. 2005

Collaborators

Detail Information

Publications9

  1. pmc NGSQC: cross-platform quality analysis pipeline for deep sequencing data
    Manhong Dai
    Department of Psychiatry, University of Michigan, Ann Arbor, MI 48109, USA
    BMC Genomics 11:S7. 2010
    ....
  2. pmc Open Biomedical Ontology-based Medline exploration
    Weijian Xuan
    Psychiatry Department and Molecular and Behavioral Neuroscience Institute, University of Michigan, USA
    BMC Bioinformatics 10:S6. 2009
    ....
  3. pmc Cross-domain neurobiology data integration and exploration
    Weijian Xuan
    Psychiatry Department and Molecular and Behavioral Neuroscience Institute, University of Michigan, USA
    BMC Genomics 11:S6. 2010
    ..However, existing solutions do not provide sufficient support for linking molecular level data to neuroanatomical structures, which is critical for understanding high level neurobiological functions...
  4. ncbi request reprint An active visual search interface for Medline
    Weijian Xuan
    Molecular and Behavioral Neuroscience Institute and Department of Psychiatry, University of Michigan, Ann Arbor, MI 48109, USA
    Comput Syst Bioinformatics Conf 6:359-69. 2007
    ..Our solution, PubViz, is based on the FLEX platform designed for interactive web applications and its prototype is publicly available at: http://brainarray.mbni.med.umich.edu/Brainarray/DataMining/PubViz...
  5. ncbi request reprint SNP Function Portal: a web database for exploring the function implication of SNP alleles
    Pinglang Wang
    Molecular and Behavioral Neuroscience Institute and Department of Psychiatry, University of Michigan, Ann Arbor, MI 48109, USA
    Bioinformatics 22:e523-9. 2006
    ....
  6. ncbi request reprint Supercomputing with toys: harnessing the power of NVIDIA 8800GTX and playstation 3 for bioinformatics problem
    Justin Wilson
    Molecular and Behavioral Neuroscience Institute and Department of Psychiatry, University of Michigan, Ann Arbor, MI 48109, USA
    Comput Syst Bioinformatics Conf 6:387-90. 2007
    ..Our initial results suggest that game hardware is a cost-effective platform for some computationally demanding bioinformatics problems...
  7. pmc HIV infection reveals widespread expansion of novel centromeric human endogenous retroviruses
    Rafael Contreras-Galindo
    Department of Internal Medicine, and Programs in Immunology, Cancer Biology, and Cellular and Molecular Biology, University of Michigan, Ann Arbor, Michigan 48109, USA
    Genome Res 23:1505-13. 2013
    ..Further, this work is an example of the potential to discover previously unknown genomic sequences through the analysis of nucleic acids found in the blood of patients. ..
  8. ncbi request reprint Web-based GeneChip analysis system for large-scale collaborative projects
    Manhong Dai
    Department of Psychiatry, Molecular and Behavioral Neuroscience Institute, University of Michigan, Ann Arbor, MI 48109, USA
    Bioinformatics 23:2185-7. 2007
    ..It also incorporates unique functions and resources for more accurate and flexible GeneChip analysis. Availability: WGAS is freely available at: http://arrayanalysis.mbni.med.umich.edu/arrayanalysis.html...
  9. pmc Evolving gene/transcript definitions significantly alter the interpretation of GeneChip data
    Manhong Dai
    Molecular and Behavioural Neuroscience Institute and Department of Psychiatry, University of Michigan, Ann Arbor, MI 48109, USA
    Nucleic Acids Res 33:e175. 2005
    ..It will be beneficial to re-analyze existing GeneChip data with updated probe set definitions...