Mark Scott Cooper

Summary

Affiliation: University of Washington
Country: USA

Publications

  1. ncbi Evolution of gastrulation in the ray-finned (actinopterygian) fishes
    Mark S Cooper
    Department of Biology and Center for Developmental Biology, University of Washington, Seattle, Washington 98195 1800, USA
    J Exp Zool B Mol Dev Evol 308:591-608. 2007
  2. ncbi Visualizing "green oil" in live algal cells
    Mark Scott Cooper
    Department of Biology, University of Washington, Seattle, WA 98195 1800, USA
    J Biosci Bioeng 109:198-201. 2010
  3. ncbi Visualizing morphogenesis in transgenic zebrafish embryos using BODIPY TR methyl ester dye as a vital counterstain for GFP
    Mark S Cooper
    Department of Biology and Center for Developmental Biology, Box 351800, University of Washington, Seattle, WA 98195, USA
    Dev Dyn 232:359-68. 2005
  4. ncbi Structural components and morphogenetic mechanics of the zebrafish yolk extension, a developmental module
    Valerie Christine Virta
    Department of Biology, University of Washington, Seattle, Washington 98195, USA
    J Exp Zool B Mol Dev Evol 316:76-92. 2011
  5. ncbi Sustained Bmp signaling is essential for cloaca development in zebrafish
    Ujwal J Pyati
    University of Washington Department of Biochemistry, Seattle, 98195 7350, USA
    Development 133:2275-84. 2006
  6. ncbi Ontogeny and phylogeny of the yolk extension in embryonic cypriniform fishes
    Valerie Christine Virta
    Department of Biology, University of Washington, Seattle, Washington 98195, USA
    J Exp Zool B Mol Dev Evol 312:196-223. 2009
  7. ncbi Structural components and morphogenetic mechanics of the zebrafish yolk extension, a developmental module
    Valerie Christine Virta
    Department of Biology, University of Washington, Seattle, Washington
    J Exp Zool B Mol Dev Evol 316:76-92. 2011
  8. ncbi The Zebrafish DVD Exchange Project: a bioinformatics initiative
    Mark S Cooper
    Department of Biology and Center for Developmental Biology, University of Washington, Seattle, Washington 98195, USA
    Methods Cell Biol 77:439-57. 2004
  9. ncbi Imaging brain development and organogenesis in zebrafish using immobilized embryonic explants
    Tobias Langenberg
    Max Planck Institute for Molecular Cell Biology and Genetics, and Department of Genetics, University of Dresden, Dresden, Germany
    Dev Dyn 228:464-74. 2003
  10. ncbi Cellular and genetic mechanisms of convergence and extension
    Lilianna Solnica-Krezel
    Department of Biological Sciences, Vanderbilt University, Nashville, Tennessee, USA
    Results Probl Cell Differ 40:136-65. 2002

Collaborators

Detail Information

Publications10

  1. ncbi Evolution of gastrulation in the ray-finned (actinopterygian) fishes
    Mark S Cooper
    Department of Biology and Center for Developmental Biology, University of Washington, Seattle, Washington 98195 1800, USA
    J Exp Zool B Mol Dev Evol 308:591-608. 2007
    ..In particular, a highly divergent form of actinopterygian gastrulation, which is found in the annual fishes of South America, demonstrates that no aspect of vertebrate gastrulation is inherently immutable to evolutionary change...
  2. ncbi Visualizing "green oil" in live algal cells
    Mark Scott Cooper
    Department of Biology, University of Washington, Seattle, WA 98195 1800, USA
    J Biosci Bioeng 109:198-201. 2010
    ..BODIPY 505/515 vital staining can be used in combination with fluorescent activated cell sorting to detect and isolate algal cells possessing high lipid content...
  3. ncbi Visualizing morphogenesis in transgenic zebrafish embryos using BODIPY TR methyl ester dye as a vital counterstain for GFP
    Mark S Cooper
    Department of Biology and Center for Developmental Biology, Box 351800, University of Washington, Seattle, WA 98195, USA
    Dev Dyn 232:359-68. 2005
    ..We discuss a variety of immediate and potential applications of BODIPY TR methyl ester dye as a vital visualization counterstain for GFP in transgenic zebrafish embryos...
  4. ncbi Structural components and morphogenetic mechanics of the zebrafish yolk extension, a developmental module
    Valerie Christine Virta
    Department of Biology, University of Washington, Seattle, Washington 98195, USA
    J Exp Zool B Mol Dev Evol 316:76-92. 2011
    ..These findings constitute an initial assessment of the morphogenetic mechanics underlying formation of the YE developmental module in zebrafish...
  5. ncbi Sustained Bmp signaling is essential for cloaca development in zebrafish
    Ujwal J Pyati
    University of Washington Department of Biochemistry, Seattle, 98195 7350, USA
    Development 133:2275-84. 2006
    ..Furthermore, our data suggest that alterations in Bmp signaling are one possible cause of anorectal malformations during human embryogenesis...
  6. ncbi Ontogeny and phylogeny of the yolk extension in embryonic cypriniform fishes
    Valerie Christine Virta
    Department of Biology, University of Washington, Seattle, Washington 98195, USA
    J Exp Zool B Mol Dev Evol 312:196-223. 2009
    ..Thus, it appears that yolk extension ontogenesis is a novel evolutionary, developmental module that has been incorporated into the phylotypic period of certain teleostean lineages...
  7. ncbi Structural components and morphogenetic mechanics of the zebrafish yolk extension, a developmental module
    Valerie Christine Virta
    Department of Biology, University of Washington, Seattle, Washington
    J Exp Zool B Mol Dev Evol 316:76-92. 2011
    ..These findings constitute an initial assessment of the morphogenetic mechanics underlying formation of the YE developmental module in zebrafish. J. Exp. Zool. (Mol. Dev. Evol.) 316:76-92, 2011. © 2010 Wiley-Liss, Inc...
  8. ncbi The Zebrafish DVD Exchange Project: a bioinformatics initiative
    Mark S Cooper
    Department of Biology and Center for Developmental Biology, University of Washington, Seattle, Washington 98195, USA
    Methods Cell Biol 77:439-57. 2004
    ..As a proactive research community, we need to create new data transfer methodologies (e.g., the Zebrafish DVD Exchange Project) to stay ahead of our bioinformatics needs...
  9. ncbi Imaging brain development and organogenesis in zebrafish using immobilized embryonic explants
    Tobias Langenberg
    Max Planck Institute for Molecular Cell Biology and Genetics, and Department of Genetics, University of Dresden, Dresden, Germany
    Dev Dyn 228:464-74. 2003
    ..These procedures can be used to study the cellular mechanics of organogenesis in "deyolked" embryos, as well as in tissues explanted from green fluorescent protein transgenic animals...
  10. ncbi Cellular and genetic mechanisms of convergence and extension
    Lilianna Solnica-Krezel
    Department of Biological Sciences, Vanderbilt University, Nashville, Tennessee, USA
    Results Probl Cell Differ 40:136-65. 2002