Bin Chen

Summary

Affiliation: University of California
Country: USA

Publications

  1. pmc Fezl regulates the differentiation and axon targeting of layer 5 subcortical projection neurons in cerebral cortex
    Bin Chen
    Department of Biological Sciences, Stanford University, Stanford, CA 94305, USA
    Proc Natl Acad Sci U S A 102:17184-9. 2005
  2. pmc The Fezf2-Ctip2 genetic pathway regulates the fate choice of subcortical projection neurons in the developing cerebral cortex
    Bin Chen
    Department of Biological Sciences, Stanford University, Stanford, CA 94305, USA
    Proc Natl Acad Sci U S A 105:11382-7. 2008
  3. doi Distal-less regulates eyespot patterns and melanization in Bicyclus butterflies
    Antonia Monteiro
    Department of Biological Sciences, University at Buffalo, Buffalo, New York, USA
    J Exp Zool B Mol Dev Evol 320:321-31. 2013
  4. pmc The determination of projection neuron identity in the developing cerebral cortex
    Dino P Leone
    Department of Biology, Stanford University, Stanford, CA 94305, USA
    Curr Opin Neurobiol 18:28-35. 2008
  5. pmc In vivo electroporation of DNA into the wing epidermis of the butterfly, Bicyclus anynana
    Kyle Golden
    Department of Biological Sciences, University at Buffalo, Buffalo, NY 14260, USA
    J Insect Sci 7:1-8. 2007
  6. doi SERS spectroscopy and SERS imaging of Shewanella oneidensis using silver nanoparticles and nanowires
    Sandra Preciado-Flores
    Department of Chemistry and Biochemistry, University of California, Santa Cruz, CA 95060, USA
    Chem Commun (Camb) 47:4129-31. 2011
  7. pmc Relating genes to function: identifying enriched transcription factors using the ENCODE ChIP-Seq significance tool
    Raymond K Auerbach
    Division of Systems Medicine, Department of Pediatrics, Stanford University School of Medicine, 1265 Welch Road, Room X 163 MS 5415, Stanford, CA 94305, USA
    Bioinformatics 29:1922-4. 2013
  8. pmc The combined effect of two mutations that alter serially homologous color pattern elements on the fore and hindwings of a butterfly
    Antonia Monteiro
    Department of Biological Sciences, University at Buffalo, Buffalo, NY 14228, USA
    BMC Genet 8:22. 2007
  9. pmc Identification and characterization of PNRC splicing variants
    Yuanzhong Wang
    Department of Biochemistry and Molecular Biology, Third Military Medical University, Chonqing, 400038, PR China
    Gene 423:116-24. 2008
  10. ncbi p53-related apoptosis resistance and tumor suppression activity in UVB-induced premature senescent human skin fibroblasts
    Wenqi Chen
    Department of Dermatology, The First Affiliated Hospital of Nanjing Medical University, Nanjing, Jiangsu Province, PR China
    Int J Mol Med 21:645-53. 2008

Collaborators

  • Antonia Monteiro
  • Min Guo
  • Jeffrey C Oliver
  • Diane M Ramos
  • Paul M Brakefield
  • Alexis M Hattox
  • Hongbing Zhang
  • Yan Zhang
  • Guiyu Lou
  • Yuping Li
  • Dujin Zhou
  • Robert Chunhua Zhao
  • Bingzong Li
  • Mingxia Shi
  • Jing Li
  • Raymond K Auerbach
  • Sandra Preciado-Flores
  • Wenqi Chen
  • Dino P Leone
  • Yuanzhong Wang
  • Fang Cai
  • Jian Chen
  • Min Chen
  • Yanning Liu
  • Kyle Golden
  • Lei Chen
  • Zheng Bo He
  • Takumi Kayukawa
  • Raushan T Kurmasheva
  • Gabriela Sekerkova
  • Atul J Butte
  • Jin Z Zhang
  • Yat Li
  • Fang Qian
  • Chaoyang Jiang
  • Marcelino Barboza-Flores
  • Zuki Tanaka
  • Tuan Minh Tran
  • Damon A Wheeler
  • Susan K McConnell
  • Wenzhong Xiang
  • Yinsheng Wan
  • Zhigang Bi
  • Robert A Holt
  • Weiling Sun
  • Fei Wang
  • Xiuzu Song
  • Bo Yang
  • Weihong Song
  • Xiaoyong Wang
  • Elizabeth Alcamo
  • Shengchun Liu
  • Weihui Zhou
  • William G Honer
  • Jiping Xia
  • Yanhua Li
  • Odysseus Zis
  • Jian Kang
  • Karpagam Srinivasan
  • Shiuan Chen
  • Lianming Liao
  • Yuangzhon Wang
  • Qin Han
  • Xi Yan
  • Rongxia Liao
  • Nicola Giuliani
  • Zhao Sun
  • Veena Sagi
  • Weibo Gao
  • Nathan Markwarth
  • Hairong Jia
  • Yu Xian Xia
  • Guo Xiong Peng
  • Yue Qing Cao
  • Zhong Kang Wang
  • You ping Yin
  • Yukio Ishikawa
  • Charlotte A Peterson
  • Shoichiro Miyazaki
  • Kyo Itoyama
  • David M Parham
  • Rachel E McDonald
  • Craig A Cooney
  • Tetsuro Shinoda
  • Lili Zheng
  • James R Bartles
  • Patricia A Loomis
  • Enrico Mugnaini
  • Ron Eytan
  • Benjarat Changyaleket

Detail Information

Publications22

  1. pmc Fezl regulates the differentiation and axon targeting of layer 5 subcortical projection neurons in cerebral cortex
    Bin Chen
    Department of Biological Sciences, Stanford University, Stanford, CA 94305, USA
    Proc Natl Acad Sci U S A 102:17184-9. 2005
    ..These results suggest that Fezl regulates the differentiation of layer 5 subcortical projection neurons...
  2. pmc The Fezf2-Ctip2 genetic pathway regulates the fate choice of subcortical projection neurons in the developing cerebral cortex
    Bin Chen
    Department of Biological Sciences, Stanford University, Stanford, CA 94305, USA
    Proc Natl Acad Sci U S A 105:11382-7. 2008
    ....
  3. doi Distal-less regulates eyespot patterns and melanization in Bicyclus butterflies
    Antonia Monteiro
    Department of Biological Sciences, University at Buffalo, Buffalo, New York, USA
    J Exp Zool B Mol Dev Evol 320:321-31. 2013
    ..We conclude that Dll is a positive regulator of focal differentiation and eyespot signaling and that this gene is also a possible selector gene for scale melanization in butterflies...
  4. pmc The determination of projection neuron identity in the developing cerebral cortex
    Dino P Leone
    Department of Biology, Stanford University, Stanford, CA 94305, USA
    Curr Opin Neurobiol 18:28-35. 2008
    ..The molecular mechanisms by which Satb2 regulates gene expression involves long-term epigenetic changes in chromatin configuration, which may enable cell fate decisions to be maintained during development...
  5. pmc In vivo electroporation of DNA into the wing epidermis of the butterfly, Bicyclus anynana
    Kyle Golden
    Department of Biological Sciences, University at Buffalo, Buffalo, NY 14260, USA
    J Insect Sci 7:1-8. 2007
    ....
  6. doi SERS spectroscopy and SERS imaging of Shewanella oneidensis using silver nanoparticles and nanowires
    Sandra Preciado-Flores
    Department of Chemistry and Biochemistry, University of California, Santa Cruz, CA 95060, USA
    Chem Commun (Camb) 47:4129-31. 2011
    ..One important observation is the synergistically enhanced SERS signal when AgNPs and AgNWs are used in conjunction, due to constructively enhanced electromagnetic field...
  7. pmc Relating genes to function: identifying enriched transcription factors using the ENCODE ChIP-Seq significance tool
    Raymond K Auerbach
    Division of Systems Medicine, Department of Pediatrics, Stanford University School of Medicine, 1265 Welch Road, Room X 163 MS 5415, Stanford, CA 94305, USA
    Bioinformatics 29:1922-4. 2013
    ..We present the ENCODE ChIP-Seq Significance Tool, a flexible web application leveraging public ENCODE data to identify enriched transcription factors in a gene or transcript list for comparative analyses...
  8. pmc The combined effect of two mutations that alter serially homologous color pattern elements on the fore and hindwings of a butterfly
    Antonia Monteiro
    Department of Biological Sciences, University at Buffalo, Buffalo, NY 14228, USA
    BMC Genet 8:22. 2007
    ....
  9. pmc Identification and characterization of PNRC splicing variants
    Yuanzhong Wang
    Department of Biochemistry and Molecular Biology, Third Military Medical University, Chonqing, 400038, PR China
    Gene 423:116-24. 2008
    ..Our results suggest that PNRC exists as functionally distinct isoforms and alternative splicing serves as a regulatory mechanism of PNRC coactivator activity...
  10. ncbi p53-related apoptosis resistance and tumor suppression activity in UVB-induced premature senescent human skin fibroblasts
    Wenqi Chen
    Department of Dermatology, The First Affiliated Hospital of Nanjing Medical University, Nanjing, Jiangsu Province, PR China
    Int J Mol Med 21:645-53. 2008
    ..Collectively, our data suggest that UVB-induced SIPS plays an important role in p53-related apoptosis resistance and tumor suppression activity...
  11. ncbi Transcriptional regulation of the human PNRC promoter by NFY in HepG2 cells
    Yan Zhang
    Department of Biochemistry and Molecular Biology, Third Military Medical University, Chongqing 400038, China
    J Biochem 143:675-83. 2008
    ..These results indicate that the transcription factor NFY specifically binds to promoter region of PNRC and negatively regulates the transcription of the human PNRC gene...
  12. doi The expression of cyclins in neurons of rats after focal cerebral ischemia
    Bin Chen
    Department of Neurology, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan 430030, China
    J Huazhong Univ Sci Technolog Med Sci 28:60-4. 2008
    ..05). It was concluded that there was a differential sensitivity among neurons from different brain regions to ischemic injury. But all of them re-enter into cell cycle after MCAO...
  13. doi SP1 regulates a human SNAP-25 gene expression
    Fang Cai
    Department of Psychiatry, Brain Research Center, The University of British Columbia, Vancouver, British Columbia, Canada
    J Neurochem 105:512-23. 2008
    ..These results suggest that SP1 plays an important role in regulation of the human SNAP-25 gene expression...
  14. ncbi Analyses of the tumour suppressor ING1 expression and gene mutation in human basal cell carcinoma
    Bin Chen
    Department of Dermatology, The First Affiliated Hospital of Nanjing Medical University, Nanjing, Jiangsu, P R China
    Int J Oncol 22:927-31. 2003
    ..Our data indicate that overexpression and mutation of the ING1 gene are infrequent in human basal cell carcinoma...
  15. ncbi Upstream CpG island methylation of the PAX3 gene in human rhabdomyosarcomas
    Raushan T Kurmasheva
    Department of Biochemistry, University of Arkansas for Medical Sciences, Little Rock, Arkansas 72205, USA
    Pediatr Blood Cancer 44:328-37. 2005
    ..PAX3 is an important gene in muscle development and muscle-producing neoplasms such as rhabdomyosarcomas...
  16. pmc Expression of mRNA for the t-complex polypeptide-1, a subunit of chaperonin CCT, is upregulated in association with increased cold hardiness in Delia antiqua
    Takumi Kayukawa
    Laboratory of Applied Entomology, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo 113 8657, Japan
    Cell Stress Chaperones 10:204-10. 2005
    ..These findings suggest that the upregulation of DaTCP-1 expression is related to enhanced cold hardiness in D antiqua. The upregulation of CCT in response to low temperature in an organism other than the yeast is newly reported...
  17. ncbi Role of hunchback in segment patterning of Locusta migratoria manilensis revealed by parental RNAi
    Zheng Bo He
    Genetic Engineering Research Center, Chongqing University, Chongqing Engineering and Technology Center of Fungal Insecticide, Chongqing 400044, China
    Dev Growth Differ 48:439-45. 2006
    ..These findings suggest a more extensive role for L. migratoria manilensis hunchback in anterior patterning than those described in Drosophila...
  18. ncbi Functional analysis on the 5'-flanking region of human FXR gene in HepG2 cells
    Guiyu Lou
    Department of Biochemistry and Molecular Biology, Third Military Medical University, Chongqing 400038, China
    Gene 396:358-68. 2007
    ....
  19. ncbi Regulation of CXCR4 expression in human mesenchymal stem cells by cytokine treatment: role in homing efficiency in NOD/SCID mice
    Mingxia Shi
    Institute of Basic Medical Sciences and School of Basic Medicine, Center of Excellence in Tissue Engineering, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing 100005, China
    Haematologica 92:897-904. 2007
    ..Homing of MSC to bone marrow (BM) post-transplantation can occur, but does so with only poor efficiency. This study was designed to evaluate the role of the SDF-1/CXCR4 axis in the homing of Flk1+ MSC derived from human fetal BM...
  20. ncbi Elevated tumor necrosis factor-alpha suppresses TAZ expression and impairs osteogenic potential of Flk-1+ mesenchymal stem cells in patients with multiple myeloma
    Bingzong Li
    Institute of Basic Medical Sciences and School of Basic Medicine, Center of Excellence in Tissue Engineering, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, P R China
    Stem Cells Dev 16:921-30. 2007
    ..The repressed osteogenesis and TAZ expression were both partially restored by neutralization of TNF-alpha. Thus, the decreased osteogenic potential of MSCs of myeloma patients was in part due to TNF-alpha suppressed TAZ expression...
  21. ncbi Flk-1+ adipose-derived mesenchymal stem cells differentiate into skeletal muscle satellite cells and ameliorate muscular dystrophy in mdx mice
    Yanning Liu
    Institute of Basic Medical Sciences and School of Basic Medicine, Center of Excellence in Tissue Engineering, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, PR China
    Stem Cells Dev 16:695-706. 2007
    ..These cells also differentiated into endothelial cells, thereby possibly improving fiber regeneration as a result of the induced angiogenesis. Therefore, Flk-1(+) AD-MSC transplants may repair muscular dystrophy...
  22. pmc Novel espin actin-bundling proteins are localized to Purkinje cell dendritic spines and bind the Src homology 3 adapter protein insulin receptor substrate p53
    Gabriela Sekerkova
    Department of Cell and Molecular Biology, Feinberg School of Medicine and the Institute for Neuroscience, Northwestern University, Chicago, Illinois 60611, USA
    J Neurosci 23:1310-9. 2003
    ....