Sourav Chatterji

Summary

Affiliation: University of California
Country: USA

Publications

  1. ncbi Reference based annotation with GeneMapper
    Sourav Chatterji
    Department of Computer Science, University of California at Berkeley, Berkeley, CA 94720, USA
    Genome Biol 7:R29. 2006
  2. ncbi Large multiple organism gene finding by collapsed Gibbs sampling
    Sourav Chatterji
    Department of Computer Science, University of California at Berkeley, Berkeley, CA 94720
    J Comput Biol 12:599-608. 2005
  3. ncbi Prediction of Saccharomyces cerevisiae replication origins
    Adam M Breier
    Graduate Group in Biophysics, University of California-Berkeley, Berkeley, CA 94720-3204, USA
    Genome Biol 5:R22. 2004
  4. ncbi Genome sequence of the Brown Norway rat yields insights into mammalian evolution
    Richard A Gibbs
    Human Genome Sequencing Center, Department of Molecular and Human Genetics, Baylor College of Medicine, MS BCM226, One Baylor Plaza, Houston, Texas 77030, USA <http://www.hgsc.bcm.tmc.edu
    Nature 428:493-521. 2004
  5. ncbi Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution
    Ladeana W Hillier
    Genome Sequencing Center, Washington University School of Medicine, Campus Box 8501, 4444 Forest Park Avenue, St Louis, Missouri 63108, USA
    Nature 432:695-716. 2004
  6. ncbi Evolution of genes and genomes on the Drosophila phylogeny
    Andrew G Clark
    Department of Molecular Biology and Genetics, Cornell University, Ithaca, New York 14853, USA
    Nature 450:203-18. 2007

Detail Information

Publications6

  1. ncbi Reference based annotation with GeneMapper
    Sourav Chatterji
    Department of Computer Science, University of California at Berkeley, Berkeley, CA 94720, USA
    Genome Biol 7:R29. 2006
    ..GeneMapper uses a profile based approach for mapping genes into multiple species, improving upon the standard pairwise approach. GeneMapper is freely available for academic use...
  2. ncbi Large multiple organism gene finding by collapsed Gibbs sampling
    Sourav Chatterji
    Department of Computer Science, University of California at Berkeley, Berkeley, CA 94720
    J Comput Biol 12:599-608. 2005
    ..It can also be seamlessly integrated with Gibbs sampling motif detection methods...
  3. ncbi Prediction of Saccharomyces cerevisiae replication origins
    Adam M Breier
    Graduate Group in Biophysics, University of California-Berkeley, Berkeley, CA 94720-3204, USA
    Genome Biol 5:R22. 2004
    ..Oriscan detected most origins in the genome, demonstrating previously unrecognized generality in yeast replication origins and significant discriminatory power in the algorithm...
  4. ncbi Genome sequence of the Brown Norway rat yields insights into mammalian evolution
    Richard A Gibbs
    Human Genome Sequencing Center, Department of Molecular and Human Genetics, Baylor College of Medicine, MS BCM226, One Baylor Plaza, Houston, Texas 77030, USA <http://www.hgsc.bcm.tmc.edu
    Nature 428:493-521. 2004
    ....
  5. ncbi Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution
    Ladeana W Hillier
    Genome Sequencing Center, Washington University School of Medicine, Campus Box 8501, 4444 Forest Park Avenue, St Louis, Missouri 63108, USA
    Nature 432:695-716. 2004
    ..The distinctive properties of avian microchromosomes, together with the inferred patterns of conserved synteny, provide additional insights into vertebrate chromosome architecture...
  6. ncbi Evolution of genes and genomes on the Drosophila phylogeny
    Andrew G Clark
    Department of Molecular Biology and Genetics, Cornell University, Ithaca, New York 14853, USA
    Nature 450:203-18. 2007
    ..These may prove to underlie differences in the ecology and behaviour of these diverse species...