Sourav Chatterji

Summary

Affiliation: University of California
Country: USA

Publications

  1. pmc Reference based annotation with GeneMapper
    Sourav Chatterji
    Department of Computer Science, University of California at Berkeley, Berkeley, CA 94720, USA
    Genome Biol 7:R29. 2006
  2. ncbi request reprint Large multiple organism gene finding by collapsed Gibbs sampling
    Sourav Chatterji
    Department of Computer Science, University of California at Berkeley, Berkeley, CA 94720
    J Comput Biol 12:599-608. 2005
  3. pmc Prediction of Saccharomyces cerevisiae replication origins
    Adam M Breier
    Graduate Group in Biophysics, University of California Berkeley, Berkeley, CA 94720 3204, USA
    Genome Biol 5:R22. 2004
  4. ncbi request reprint Genome sequence of the Brown Norway rat yields insights into mammalian evolution
    Richard A Gibbs
    Human Genome Sequencing Center, Department of Molecular and Human Genetics, Baylor College of Medicine, MS BCM226, One Baylor Plaza, Houston, Texas 77030, USA lt http www hgsc bcm tmc edu
    Nature 428:493-521. 2004
  5. ncbi request reprint Evolution of genes and genomes on the Drosophila phylogeny
    Andrew G Clark
    Department of Molecular Biology and Genetics, Cornell University, Ithaca, New York 14853, USA
    Nature 450:203-18. 2007

Detail Information

Publications6

  1. pmc Reference based annotation with GeneMapper
    Sourav Chatterji
    Department of Computer Science, University of California at Berkeley, Berkeley, CA 94720, USA
    Genome Biol 7:R29. 2006
    ..GeneMapper uses a profile based approach for mapping genes into multiple species, improving upon the standard pairwise approach. GeneMapper is freely available for academic use...
  2. ncbi request reprint Large multiple organism gene finding by collapsed Gibbs sampling
    Sourav Chatterji
    Department of Computer Science, University of California at Berkeley, Berkeley, CA 94720
    J Comput Biol 12:599-608. 2005
    ..It can also be seamlessly integrated with Gibbs sampling motif detection methods...
  3. pmc Prediction of Saccharomyces cerevisiae replication origins
    Adam M Breier
    Graduate Group in Biophysics, University of California Berkeley, Berkeley, CA 94720 3204, USA
    Genome Biol 5:R22. 2004
    ..The yeast genome contains more than 10,000 ACS matches, but there are only a few hundred origins, and little flanking sequence similarity has been found. Thus, identification of origins by sequence alone has not been possible...
  4. ncbi request reprint Genome sequence of the Brown Norway rat yields insights into mammalian evolution
    Richard A Gibbs
    Human Genome Sequencing Center, Department of Molecular and Human Genetics, Baylor College of Medicine, MS BCM226, One Baylor Plaza, Houston, Texas 77030, USA lt http www hgsc bcm tmc edu
    Nature 428:493-521. 2004
    ....
  5. ncbi request reprint Evolution of genes and genomes on the Drosophila phylogeny
    Andrew G Clark
    Department of Molecular Biology and Genetics, Cornell University, Ithaca, New York 14853, USA
    Nature 450:203-18. 2007
    ..These may prove to underlie differences in the ecology and behaviour of these diverse species...