Arthur Brady

Summary

Affiliation: University of Maryland
Country: USA

Publications

  1. pmc Fault tolerance in protein interaction networks: stable bipartite subgraphs and redundant pathways
    Arthur Brady
    Center for Bioinformatics and Computational Biology, University of Maryland, College Park, MD, USA
    PLoS ONE 4:e5364. 2009
  2. pmc Phymm and PhymmBL: metagenomic phylogenetic classification with interpolated Markov models
    Arthur Brady
    Center for Bioinformatics and Computational Biology, University of Maryland, College Park, Maryland, USA
    Nat Methods 6:673-6. 2009
  3. pmc MetaRef: a pan-genomic database for comparative and community microbial genomics
    Katherine Huang
    Genome Sequencing and Analysis Program, Broad Institute of MIT and Harvard, 7 Cambridge Center, Cambridge, MA 02142, USA, Institute for Genome Sciences, University of Maryland School of Medicine, 801 W Baltimore St, Baltimore, MD 21201, USA, Biostatistics Department, Harvard School of Public Health, 655 Huntington Avenue, Boston, MA 02115, USA and Centre for Integrative Biology, University of Trento, Via Sommarive 14, 38123 Povo Trento, Italy
    Nucleic Acids Res 42:D617-24. 2014

Collaborators

Detail Information

Publications3

  1. pmc Fault tolerance in protein interaction networks: stable bipartite subgraphs and redundant pathways
    Arthur Brady
    Center for Bioinformatics and Computational Biology, University of Maryland, College Park, MD, USA
    PLoS ONE 4:e5364. 2009
    ..We uncover some interesting biological examples of previously unknown putative redundant pathways in such areas as vesicle-mediated transport and DNA repair...
  2. pmc Phymm and PhymmBL: metagenomic phylogenetic classification with interpolated Markov models
    Arthur Brady
    Center for Bioinformatics and Computational Biology, University of Maryland, College Park, Maryland, USA
    Nat Methods 6:673-6. 2009
    ..We also describe how combining Phymm with sequence alignment algorithms improves accuracy...
  3. pmc MetaRef: a pan-genomic database for comparative and community microbial genomics
    Katherine Huang
    Genome Sequencing and Analysis Program, Broad Institute of MIT and Harvard, 7 Cambridge Center, Cambridge, MA 02142, USA, Institute for Genome Sciences, University of Maryland School of Medicine, 801 W Baltimore St, Baltimore, MD 21201, USA, Biostatistics Department, Harvard School of Public Health, 655 Huntington Avenue, Boston, MA 02115, USA and Centre for Integrative Biology, University of Trento, Via Sommarive 14, 38123 Povo Trento, Italy
    Nucleic Acids Res 42:D617-24. 2014
    ..MetaRef provides all information both as an online browsable resource and as downloadable sequences and tabular data files that can be used for subsequent offline studies. ..