Anthony D Aragon

Summary

Affiliation: University of New Mexico
Country: USA

Publications

  1. pmc Genomic analysis of stationary-phase and exit in Saccharomyces cerevisiae: gene expression and identification of novel essential genes
    M Juanita Martinez
    Department of Biology, University of New Mexico, Albuquerque, NM 87131, USA
    Mol Biol Cell 15:5295-305. 2004
  2. pmc Release of extraction-resistant mRNA in stationary phase Saccharomyces cerevisiae produces a massive increase in transcript abundance in response to stress
    Anthony D Aragon
    Department of Biology, University of New Mexico, Albuquerque, NM 87131, USA
    Genome Biol 7:R9. 2006
  3. pmc Characterization of differentiated quiescent and nonquiescent cells in yeast stationary-phase cultures
    Anthony D Aragon
    Department of Biology, University of New Mexico, Albuquerque, NM 87131, USA
    Mol Biol Cell 19:1271-80. 2008
  4. pmc Hyperspectral microarray scanning: impact on the accuracy and reliability of gene expression data
    Jerilyn A Timlin
    Sandia National Laboratories, Albuquerque, NM 87185, USA
    BMC Genomics 6:72. 2005
  5. ncbi An automated, pressure-driven sampling device for harvesting from liquid cultures for genomic and biochemical analyses
    Anthony D Aragon
    Department of Biology, University of New Mexico, Albuquerque, NM 87131, USA
    J Microbiol Methods 65:357-60. 2006
  6. ncbi A hidden-state Markov model for cell population deconvolution
    Sushmita Roy
    Department of Computer Science, University of New Mexico, Albuquerque, NM 87131, USA
    J Comput Biol 13:1749-74. 2006
  7. pmc Differential transcriptomic responses of Biomphalaria glabrata (Gastropoda, Mollusca) to bacteria and metazoan parasites, Schistosoma mansoni and Echinostoma paraensei (Digenea, Platyhelminthes)
    Coen M Adema
    Center for Evolutionary and Theoretical Immunology, Biology MSC03 2020, 1 University of New Mexico, Albuquerque, NM 87131, USA
    Mol Immunol 47:849-60. 2010
  8. pmc Microarray based analysis of temperature and oxidative stress induced messenger RNA in Schistosoma mansoni
    Anthony D Aragon
    Department of Biology, 216 Castetter Hall, University of New Mexico, Albuquerque, NM 87131, USA
    Mol Biochem Parasitol 162:134-41. 2008
  9. pmc Genomic analysis of Saccharomyces cerevisiae isolates that grow optimally with glucose as the sole carbon source
    Anthony D Aragon
    UNM Department of Molecular Genetics and Microbiology, University of New Mexico, Albuquerque, NM 87131, USA
    Electrophoresis 33:3514-20. 2012
  10. pmc Isolation of quiescent and nonquiescent cells from yeast stationary-phase cultures
    Chris Allen
    Department of Biology, Health Sciences Center, University of New Mexico, Albuquerque, NM 87131, USA
    J Cell Biol 174:89-100. 2006

Collaborators

Detail Information

Publications12

  1. pmc Genomic analysis of stationary-phase and exit in Saccharomyces cerevisiae: gene expression and identification of novel essential genes
    M Juanita Martinez
    Department of Biology, University of New Mexico, Albuquerque, NM 87131, USA
    Mol Biol Cell 15:5295-305. 2004
    ....
  2. pmc Release of extraction-resistant mRNA in stationary phase Saccharomyces cerevisiae produces a massive increase in transcript abundance in response to stress
    Anthony D Aragon
    Department of Biology, University of New Mexico, Albuquerque, NM 87131, USA
    Genome Biol 7:R9. 2006
    ..We asked whether cells in stationary phase cultures respond to additional stress at the level of transcript abundance...
  3. pmc Characterization of differentiated quiescent and nonquiescent cells in yeast stationary-phase cultures
    Anthony D Aragon
    Department of Biology, University of New Mexico, Albuquerque, NM 87131, USA
    Mol Biol Cell 19:1271-80. 2008
    ..These studies are relevant to chronological aging, cell cycle, and genome evolution, and they provide insight into complex responses that even simple organisms have to starvation...
  4. pmc Hyperspectral microarray scanning: impact on the accuracy and reliability of gene expression data
    Jerilyn A Timlin
    Sandia National Laboratories, Albuquerque, NM 87185, USA
    BMC Genomics 6:72. 2005
    ....
  5. ncbi An automated, pressure-driven sampling device for harvesting from liquid cultures for genomic and biochemical analyses
    Anthony D Aragon
    Department of Biology, University of New Mexico, Albuquerque, NM 87131, USA
    J Microbiol Methods 65:357-60. 2006
    ..Correlation between biological replicate time courses measured by microarrays was extremely high. The sampler enables sampling at intervals within the range of many important biological processes...
  6. ncbi A hidden-state Markov model for cell population deconvolution
    Sushmita Roy
    Department of Computer Science, University of New Mexico, Albuquerque, NM 87131, USA
    J Comput Biol 13:1749-74. 2006
    ....
  7. pmc Differential transcriptomic responses of Biomphalaria glabrata (Gastropoda, Mollusca) to bacteria and metazoan parasites, Schistosoma mansoni and Echinostoma paraensei (Digenea, Platyhelminthes)
    Coen M Adema
    Center for Evolutionary and Theoretical Immunology, Biology MSC03 2020, 1 University of New Mexico, Albuquerque, NM 87131, USA
    Mol Immunol 47:849-60. 2010
    ..Clearly, the immune defenses of B. glabrata distinguish and respond differently to various immune challenges...
  8. pmc Microarray based analysis of temperature and oxidative stress induced messenger RNA in Schistosoma mansoni
    Anthony D Aragon
    Department of Biology, 216 Castetter Hall, University of New Mexico, Albuquerque, NM 87131, USA
    Mol Biochem Parasitol 162:134-41. 2008
    ..Seventy-two elements were common to both stressors and could potentially be exploited in the development of novel anti-schistosomal therapeutics...
  9. pmc Genomic analysis of Saccharomyces cerevisiae isolates that grow optimally with glucose as the sole carbon source
    Anthony D Aragon
    UNM Department of Molecular Genetics and Microbiology, University of New Mexico, Albuquerque, NM 87131, USA
    Electrophoresis 33:3514-20. 2012
    ..Namely, the decreased ethanol production suggest that the underlying metabolism switched from fermentation to respiration during the selection for optimal growth on glucose...
  10. pmc Isolation of quiescent and nonquiescent cells from yeast stationary-phase cultures
    Chris Allen
    Department of Biology, Health Sciences Center, University of New Mexico, Albuquerque, NM 87131, USA
    J Cell Biol 174:89-100. 2006
    ..The ability to isolate both quiescent and nonquiescent yeast cells from SP cultures provides a novel, tractable experimental system for studies of quiescence, chronological and replicative aging, apoptosis, and the cell cycle...
  11. pmc Towards an understanding of the mechanism of action of praziquantel
    Anthony D Aragon
    Center for Evolutionary and Theoretical Immunology, Department of Biology, University of New Mexico, Albuquerque, NM 87131, USA
    Mol Biochem Parasitol 164:57-65. 2009
    ..mansoni PR-1. Annotation of genes differentially regulated by PZQ exposure suggests that schistosomes may undergo a transcriptomic response similar to that observed during oxidative stress...
  12. pmc Identification and removal of contaminating fluorescence from commercial and in-house printed DNA microarrays
    M Juanita Martinez
    Department of Biology, University of New Mexico, Albuquerque, NM 87131, USA
    Nucleic Acids Res 31:e18. 2003
    ....