R M Adkins

Summary

Affiliation: University of Tennessee
Country: USA

Publications

  1. pmc Genome-wide analysis of the RpoN regulon in Geobacter sulfurreducens
    Ching Leang
    Department of Microbiology, University of Massachusetts, Amherst, MA 01003, USA
    BMC Genomics 10:331. 2009
  2. pmc Computation of haplotypes on SNPs subsets: advantage of the "global method"
    Cedric Coulonges
    Equipe Genomique, Bioinformatique et Pathologies du Systeme Immunitaire, INSERM U736, 15 rue de l Ecole de Medecine, 75006 Paris, France
    BMC Genet 7:50. 2006
  3. pmc Comparison of the accuracy of methods of computational haplotype inference using a large empirical dataset
    Ronald M Adkins
    Children s Foundation Research Center and Center of Genomics and Bioinformatics, University of Tennessee, Memphis, TN, USA
    BMC Genet 5:22. 2004
  4. pmc Association of maternally inherited GNAS alleles with African-American male birth weight
    Ronald M Adkins
    Department of Pediatrics, University of Tennessee Health Science Center, Memphis, TN 38103, USA
    Int J Pediatr Obes 5:177-84. 2010
  5. ncbi request reprint Site -2548 of the leptin gene is associated with gender-specific trends in newborn size and cord leptin levels
    Ronald M Adkins
    Children s Foundation Research Center and Center of Genomics and Bioinformatics, University of Tennessee Health Science Center, Memphis, TN 38122, USA
    Int J Pediatr Obes 2:130-7. 2007
  6. ncbi request reprint Association between small for gestational age and paternally inherited 5' insulin haplotypes
    R M Adkins
    Department of Pediatrics, University of Tennessee Health Science Center, Memphis, TN 38103, USA
    Int J Obes (Lond) 32:372-80. 2008
  7. ncbi request reprint Association between paternally inherited haplotypes upstream of the insulin gene and umbilical cord IGF-II levels
    Ronald M Adkins
    Department of Pediatrics, University of Tennessee Health Science Center, Memphis, Tennessee 38103, USA
    Pediatr Res 62:451-5. 2007
  8. ncbi request reprint Computational prediction of RpoS and RpoD regulatory sites in Geobacter sulfurreducens using sequence and gene expression information
    Bin Yan
    Department of Preventive Medicine, University of Tennessee Health Science Center, Memphis, TN, 38163, USA
    Gene 384:73-95. 2006
  9. doi request reprint GSEL version 2, an online genome-wide query system of operon organization and regulatory sequence elements of Geobacter sulfurreducens
    Yanhua Qu
    Department of Preventive Medicine, The University of Tennessee Health Science Center, Memphis, Tennessee 38163, USA
    OMICS 13:439-49. 2009
  10. doi request reprint Diversity of promoter elements in a Geobacter sulfurreducens mutant adapted to disruption in electron transfer
    Julia Krushkal
    Department of Preventive Medicine, University of Tennessee Health Science Center, 66 N Pauline Ste 633, Memphis, TN 38163, USA
    Funct Integr Genomics 9:15-25. 2009

Collaborators

Detail Information

Publications13

  1. pmc Genome-wide analysis of the RpoN regulon in Geobacter sulfurreducens
    Ching Leang
    Department of Microbiology, University of Massachusetts, Amherst, MA 01003, USA
    BMC Genomics 10:331. 2009
    ....
  2. pmc Computation of haplotypes on SNPs subsets: advantage of the "global method"
    Cedric Coulonges
    Equipe Genomique, Bioinformatique et Pathologies du Systeme Immunitaire, INSERM U736, 15 rue de l Ecole de Medecine, 75006 Paris, France
    BMC Genet 7:50. 2006
    ..In the present work, we describe an alternative approach, called the "global method", which takes into account all the SNPs known in the region and compare the efficacy of the two "direct" and "global" methods...
  3. pmc Comparison of the accuracy of methods of computational haplotype inference using a large empirical dataset
    Ronald M Adkins
    Children s Foundation Research Center and Center of Genomics and Bioinformatics, University of Tennessee, Memphis, TN, USA
    BMC Genet 5:22. 2004
    ....
  4. pmc Association of maternally inherited GNAS alleles with African-American male birth weight
    Ronald M Adkins
    Department of Pediatrics, University of Tennessee Health Science Center, Memphis, TN 38103, USA
    Int J Pediatr Obes 5:177-84. 2010
    ..We performed a survey of single nucleotide polymorphisms (SNPs) in 14 candidate genes to identify associations with birth weight variation...
  5. ncbi request reprint Site -2548 of the leptin gene is associated with gender-specific trends in newborn size and cord leptin levels
    Ronald M Adkins
    Children s Foundation Research Center and Center of Genomics and Bioinformatics, University of Tennessee Health Science Center, Memphis, TN 38122, USA
    Int J Pediatr Obes 2:130-7. 2007
    ..We examined the relationships among leptin gene polymorphisms, size for gestational age, umbilical cord leptin, and gender...
  6. ncbi request reprint Association between small for gestational age and paternally inherited 5' insulin haplotypes
    R M Adkins
    Department of Pediatrics, University of Tennessee Health Science Center, Memphis, TN 38103, USA
    Int J Obes (Lond) 32:372-80. 2008
    ..To test the association between small for gestational age and polymorphisms in the insulin gene in newborns and their mothers, as well as the effect of the parental transmission of haplotypes...
  7. ncbi request reprint Association between paternally inherited haplotypes upstream of the insulin gene and umbilical cord IGF-II levels
    Ronald M Adkins
    Department of Pediatrics, University of Tennessee Health Science Center, Memphis, Tennessee 38103, USA
    Pediatr Res 62:451-5. 2007
    ..Analyses of haplotypes inferred from these two SNPs demonstrate a significant relationship between paternally transmitted haplotypes and newborn IGF-II levels, but no association with maternally transmitted haplotypes...
  8. ncbi request reprint Computational prediction of RpoS and RpoD regulatory sites in Geobacter sulfurreducens using sequence and gene expression information
    Bin Yan
    Department of Preventive Medicine, University of Tennessee Health Science Center, Memphis, TN, 38163, USA
    Gene 384:73-95. 2006
    ....
  9. doi request reprint GSEL version 2, an online genome-wide query system of operon organization and regulatory sequence elements of Geobacter sulfurreducens
    Yanhua Qu
    Department of Preventive Medicine, The University of Tennessee Health Science Center, Memphis, Tennessee 38163, USA
    OMICS 13:439-49. 2009
    ..sulfurreducens, aiding in investigation of mechanisms that regulate its ability to generate electric power, bioremediate environmental waste, and adapt to environmental changes...
  10. doi request reprint Diversity of promoter elements in a Geobacter sulfurreducens mutant adapted to disruption in electron transfer
    Julia Krushkal
    Department of Preventive Medicine, University of Tennessee Health Science Center, 66 N Pauline Ste 633, Memphis, TN 38163, USA
    Funct Integr Genomics 9:15-25. 2009
    ....
  11. ncbi request reprint Genome-wide expression profiling in Geobacter sulfurreducens: identification of Fur and RpoS transcription regulatory sites in a relGsu mutant
    Julia Krushkal
    Department of Preventive Medicine, University of Tennessee Health Science Center, 66 N Pauline, Memphis, TN 38163, USA
    Funct Integr Genomics 7:229-55. 2007
    ..These findings suggest that Fur- and RpoS-dependent gene expression in G. sulfurreducens is affected by Rel(Gsu)-mediated signaling...
  12. doi request reprint Genome-wide survey for PilR recognition sites of the metal-reducing prokaryote Geobacter sulfurreducens
    Julia Krushkal
    Department of Preventive Medicine, University of Tennessee Health Science Center, Memphis, TN 38163, USA
    Gene 469:31-44. 2010
    ..sulfurreducens PilR in regulation of production and assembly of pili and flagella...

Research Grants4

  1. Maternal-Fetal Conflict: The Effect of Imprinted Genes on Fetal Growth
    Ronald Adkins; Fiscal Year: 2007
    ..For example, dietary interventions that alter the accessibility of methyl donors have shown promise in mouse models. ..
  2. Genomics and Epigenomics of Fetal Growth Regulation
    Ronald Adkins; Fiscal Year: 2009
    ..Statistical analyses will be performed to test the three hypotheses. Note: The only change from the original abstract is a change from 1,000 to 800 mothernewborn pairs. ..
  3. Maternal-Fetal Conflict: The Effect of Imprinted Genes on Fetal Growth
    Ronald Adkins; Fiscal Year: 2009
    ..Dietary survey instruments during pregnancy and just afterwards will be used to determine the maternal intake of nutrients vital to DNA methylation. Statistical analyses will be performed to test the three hypotheses. ..