Stefano Volinia

Summary

Affiliation: The Ohio State University
Country: USA

Publications

  1. pmc Prognostic microRNA/mRNA signature from the integrated analysis of patients with invasive breast cancer
    Stefano Volinia
    Department of Morphology, Surgery and Experimental Medicine, University of Ferrara, 44121 Ferrara, Italy
    Proc Natl Acad Sci U S A 110:7413-7. 2013
  2. pmc Breast cancer signatures for invasiveness and prognosis defined by deep sequencing of microRNA
    Stefano Volinia
    Data Mining for Analysis of Biosystems, Department of Morphology and Embryology, and Medical Oncology, Universita degli Studi, 44100 Ferrara, Italy
    Proc Natl Acad Sci U S A 109:3024-9. 2012
  3. pmc MicroRNA expression profiling of male breast cancer
    Matteo Fassan
    Department of Urology, Thomas Jefferson University Kimmel Cancer Center, 1112 College Building, 1025 Walnut Street, PA 19107, USA
    Breast Cancer Res 11:R58. 2009
  4. pmc Compatible solutes from hyperthermophiles improve the quality of DNA microarrays
    Nicoletta Mascellani
    Dipartimento di Morfologia ed Embriologia and DAMA, Data Mining for Analysis of DNA Microarrays, Telethon Facility, Universita degli Studi di Ferrara, Ferrara, Italy
    BMC Biotechnol 7:82. 2007
  5. pmc Reprogramming of miRNA networks in cancer and leukemia
    Stefano Volinia
    Data Mining for Analysis of Microarrays, Department of Morphology and Embryology, Universita degli Studi, Ferrara 44100, Italy
    Genome Res 20:589-99. 2010
  6. doi request reprint Prion proteins (PRNP and PRND) are over-expressed in osteosarcoma
    Vincenzo Sollazzo
    Orthopaedic Clinic, University of Ferrara, Ferrara, Italy
    J Orthop Res 30:1004-12. 2012
  7. doi request reprint Next generation analysis of breast cancer genomes for precision medicine
    Maurizio Previati
    LTTA, Dept of Morphology, Surgery and Experimental Medicine, Human Anatomy Branch, University of Ferrara, Italy
    Cancer Lett 339:1-7. 2013
  8. doi request reprint GAMES identifies and annotates mutations in next-generation sequencing projects
    Maria Elena Sana
    DAMA, Data Mining for Analysis of DNA, Department of Morphology and Embryology and TecnoPolo for Life Sciences, University of Ferrara, Ferrara, Italy
    Bioinformatics 27:9-13. 2011
  9. doi request reprint MicroRNA expression signatures in solid malignancies
    Marco Galasso
    Dipartimento di Morfologia ed Embriologia and LTTA, University of Ferrara, Ferrara, Italy
    Cancer J 18:238-43. 2012
  10. pmc Genome wide identification of recessive cancer genes by combinatorial mutation analysis
    Stefano Volinia
    Data Mining for Analysis of Microarrays, Universita degli Studi, Ferrara, Italy
    PLoS ONE 3:e3380. 2008

Collaborators

Detail Information

Publications13

  1. pmc Prognostic microRNA/mRNA signature from the integrated analysis of patients with invasive breast cancer
    Stefano Volinia
    Department of Morphology, Surgery and Experimental Medicine, University of Ferrara, 44121 Ferrara, Italy
    Proc Natl Acad Sci U S A 110:7413-7. 2013
    ....
  2. pmc Breast cancer signatures for invasiveness and prognosis defined by deep sequencing of microRNA
    Stefano Volinia
    Data Mining for Analysis of Biosystems, Department of Morphology and Embryology, and Medical Oncology, Universita degli Studi, 44100 Ferrara, Italy
    Proc Natl Acad Sci U S A 109:3024-9. 2012
    ..Additionally, we detected differential splicing isoforms with special features, including a truncated EGFR lacking the kinase domain and overexpressed only in ductal carcinoma in situ...
  3. pmc MicroRNA expression profiling of male breast cancer
    Matteo Fassan
    Department of Urology, Thomas Jefferson University Kimmel Cancer Center, 1112 College Building, 1025 Walnut Street, PA 19107, USA
    Breast Cancer Res 11:R58. 2009
    ....
  4. pmc Compatible solutes from hyperthermophiles improve the quality of DNA microarrays
    Nicoletta Mascellani
    Dipartimento di Morfologia ed Embriologia and DAMA, Data Mining for Analysis of DNA Microarrays, Telethon Facility, Universita degli Studi di Ferrara, Ferrara, Italy
    BMC Biotechnol 7:82. 2007
    ..Compatible solutes show stabilization effects towards biological macromolecules, including DNA...
  5. pmc Reprogramming of miRNA networks in cancer and leukemia
    Stefano Volinia
    Data Mining for Analysis of Microarrays, Department of Morphology and Embryology, Universita degli Studi, Ferrara 44100, Italy
    Genome Res 20:589-99. 2010
    ..Finally, we experimentally validated the miRNA network with acute lymphocytic leukemia originated in Mir155 transgenic mice. Most of miRNAs deregulated in these transgenic mice were located close to hsa-miR-155 in the cancer network...
  6. doi request reprint Prion proteins (PRNP and PRND) are over-expressed in osteosarcoma
    Vincenzo Sollazzo
    Orthopaedic Clinic, University of Ferrara, Ferrara, Italy
    J Orthop Res 30:1004-12. 2012
    ..Since Prion proteins seem to be related to osteosarcoma development, their inhibition could represent a new approach to the molecular treatment of osteosarcoma...
  7. doi request reprint Next generation analysis of breast cancer genomes for precision medicine
    Maurizio Previati
    LTTA, Dept of Morphology, Surgery and Experimental Medicine, Human Anatomy Branch, University of Ferrara, Italy
    Cancer Lett 339:1-7. 2013
    ..This review is focused on the most recent advances in the field of cancer genomics and epigenomics, including DNA alterations and driver gene mutations, gene fusions, DNA methylation and miRNA expression...
  8. doi request reprint GAMES identifies and annotates mutations in next-generation sequencing projects
    Maria Elena Sana
    DAMA, Data Mining for Analysis of DNA, Department of Morphology and Embryology and TecnoPolo for Life Sciences, University of Ferrara, Ferrara, Italy
    Bioinformatics 27:9-13. 2011
    ..However, the limitations of these applications include output which is insufficiently annotated and of difficult functional comprehension to end users...
  9. doi request reprint MicroRNA expression signatures in solid malignancies
    Marco Galasso
    Dipartimento di Morfologia ed Embriologia and LTTA, University of Ferrara, Ferrara, Italy
    Cancer J 18:238-43. 2012
    ..We provide a review highlighting recent progress on the understanding of the cellular function of human microRNAs and their expression in solid tumors...
  10. pmc Genome wide identification of recessive cancer genes by combinatorial mutation analysis
    Stefano Volinia
    Data Mining for Analysis of Microarrays, Universita degli Studi, Ferrara, Italy
    PLoS ONE 3:e3380. 2008
    ..5% genes. The functions significantly affected by cancer mutations are exactly overlapping those of known cancer genes, with the critical exception for the absence of tyrosine kinases, as expected for a recessive gene-set...
  11. pmc Identification of microRNA activity by Targets' Reverse EXpression
    Stefano Volinia
    DAMA, Data Mining for Analysis of Microarrays, Department of Morphology and Embryology, University of Ferrara, Italy
    Bioinformatics 26:91-7. 2010
    ..Prominent interest in miRNAs strongly motivates the need for increasing the options available to detect their cellular activity...
  12. ncbi request reprint Molecular classification of nodal metastasis in primary larynx squamous cell carcinoma
    Francesco Carinci
    Department of Maxillofacial Surgery, University of Ferrara, Ferrara, Italy
    Transl Res 150:233-45. 2007
    ..This large-scale gene expression analysis in LSCC provides information on changes in genomic activity associated with lymphonodal metastasis and identifies molecules that might prove useful as novel therapeutic targets...
  13. pmc Non-coding RNAs: a key to future personalized molecular therapy?
    Marco Galasso
    Data Mining for Analysis of Microarrays, Department of Morphology and Embryology, Universita degli Studi di Ferrara, 44100 Ferrara, Italy
    Genome Med 2:12. 2010
    ..Here we review recent progress on our understanding of the biological functions of human ncRNAs and their clinical potential...