Andrew I Su

Summary

Affiliation: The Scripps Research Institute
Country: USA

Publications

  1. pmc Games with a scientific purpose
    Benjamin M Good
    Department of Molecular and Experimental Medicine, The Scripps Research Institute, La Jolla, CA 92037, USA
    Genome Biol 12:135. 2011
  2. pmc A task-based approach for Gene Ontology evaluation
    Erik L Clarke
    The Scripps Research Institute, La Jolla, CA, USA
    J Biomed Semantics 4:S4. 2013
  3. pmc Linking genes to diseases with a SNPedia-Gene Wiki mashup
    Benjamin M Good
    The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, CA, 92037, USA
    J Biomed Semantics 3:S6. 2012
  4. pmc Building a biomedical semantic network in Wikipedia with Semantic Wiki Links
    Benjamin M Good
    The Scripps Research Institute, La Jolla, CA 92037, USA
    Database (Oxford) 2012:bar060. 2012
  5. pmc Dizeez: an online game for human gene-disease annotation
    Salvatore Loguercio
    Department of Molecular and Experimental Medicine, The Scripps Research Institute, La Jolla, California, United States of America
    PLoS ONE 8:e71171. 2013
  6. pmc BioGPS and MyGene.info: organizing online, gene-centric information
    Chunlei Wu
    Department of Molecular and Experimental Medicine, The Scripps Research Institute, La Jolla, CA 92037, USA
    Nucleic Acids Res 41:D561-5. 2013
  7. pmc Mining the Gene Wiki for functional genomic knowledge
    Benjamin M Good
    Department of Molecular and Experimental Medicine, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, CA 92037, USA
    BMC Genomics 12:603. 2011
  8. pmc Crowdsourcing for bioinformatics
    Benjamin M Good
    Department of Molecular and Experimental Medicine, The Scripps Research Institute, La Jolla, CA 92037, USA
    Bioinformatics 29:1925-33. 2013
  9. pmc Deep sequencing of the murine igh repertoire reveals complex regulation of nonrandom v gene rearrangement frequencies
    Nancy M Choi
    Department of Immunology and Microbial Science, The Scripps Research Institute, La Jolla, CA 92037
    J Immunol 191:2393-402. 2013
  10. pmc Stress-independent activation of XBP1s and/or ATF6 reveals three functionally diverse ER proteostasis environments
    Matthew D Shoulders
    Department of Chemistry, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, CA 92037, USA
    Cell Rep 3:1279-92. 2013

Collaborators

Detail Information

Publications11

  1. pmc Games with a scientific purpose
    Benjamin M Good
    Department of Molecular and Experimental Medicine, The Scripps Research Institute, La Jolla, CA 92037, USA
    Genome Biol 12:135. 2011
    ..The protein folding game Foldit shows that games are an effective way to recruit, engage and organize ordinary citizens to help solve difficult scientific problems...
  2. pmc A task-based approach for Gene Ontology evaluation
    Erik L Clarke
    The Scripps Research Institute, La Jolla, CA, USA
    J Biomed Semantics 4:S4. 2013
    ..This task-based approach yields quantitative assessments grounded in experimental data and anchored tightly to the primary use of the annotations...
  3. pmc Linking genes to diseases with a SNPedia-Gene Wiki mashup
    Benjamin M Good
    The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, CA, 92037, USA
    J Biomed Semantics 3:S6. 2012
    ..Here we show how advances in wiki technology and natural language processing can be used to automatically assemble 'meta-wikis' that present integrated views over the data collaboratively created in multiple source wikis...
  4. pmc Building a biomedical semantic network in Wikipedia with Semantic Wiki Links
    Benjamin M Good
    The Scripps Research Institute, La Jolla, CA 92037, USA
    Database (Oxford) 2012:bar060. 2012
    ..DATABASE URL: http://en.wikipedia.org/wiki/Portal:Gene_Wiki...
  5. pmc Dizeez: an online game for human gene-disease annotation
    Salvatore Loguercio
    Department of Molecular and Experimental Medicine, The Scripps Research Institute, La Jolla, California, United States of America
    PLoS ONE 8:e71171. 2013
    ..These early results provide a basic proof of principle that online games can be successfully applied to the challenge of gene annotation. Dizeez is available at http://genegames.org. ..
  6. pmc BioGPS and MyGene.info: organizing online, gene-centric information
    Chunlei Wu
    Department of Molecular and Experimental Medicine, The Scripps Research Institute, La Jolla, CA 92037, USA
    Nucleic Acids Res 41:D561-5. 2013
    ..Finally, we describe MyGene.info (http://mygene.info) and related web services that provide programmatic access to BioGPS...
  7. pmc Mining the Gene Wiki for functional genomic knowledge
    Benjamin M Good
    Department of Molecular and Experimental Medicine, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, CA 92037, USA
    BMC Genomics 12:603. 2011
    ..We specifically explore the generation of structured annotations using the Gene Ontology and the Human Disease Ontology...
  8. pmc Crowdsourcing for bioinformatics
    Benjamin M Good
    Department of Molecular and Experimental Medicine, The Scripps Research Institute, La Jolla, CA 92037, USA
    Bioinformatics 29:1925-33. 2013
    ..Recently, the bioinformatics community has begun to apply crowdsourcing in a variety of contexts, yet few resources are available that describe how these human-powered systems work and how to use them effectively in scientific domains...
  9. pmc Deep sequencing of the murine igh repertoire reveals complex regulation of nonrandom v gene rearrangement frequencies
    Nancy M Choi
    Department of Immunology and Microbial Science, The Scripps Research Institute, La Jolla, CA 92037
    J Immunol 191:2393-402. 2013
    ..Thus, the Igh locus has evolved a complex system for the regulation of V(D)J rearrangement that is different for each of the four domains that comprise this locus. ..
  10. pmc Stress-independent activation of XBP1s and/or ATF6 reveals three functionally diverse ER proteostasis environments
    Matthew D Shoulders
    Department of Chemistry, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, CA 92037, USA
    Cell Rep 3:1279-92. 2013
    ....
  11. pmc The Gene Wiki in 2011: community intelligence applied to human gene annotation
    Benjamin M Good
    Department of Molecular and Experimental Medicine, The Scripps Research Institute, La Jolla, CA 92037, USA
    Nucleic Acids Res 40:D1255-61. 2012
    ..All articles in the Gene Wiki can be freely accessed and edited at Wikipedia, and additional links and information can be found at the project's Wikipedia portal page: http://en.wikipedia.org/wiki/Portal:Gene_Wiki...