R Keith Slotkin

Summary

Affiliation: The Ohio State University
Country: USA

Publications

  1. pmc Gene expression and stress response mediated by the epigenetic regulation of a transposable element small RNA
    Andrea D McCue
    Department of Molecular Genetics, The Ohio State University, Columbus, Ohio, USA
    PLoS Genet 8:e1002474. 2012
  2. pmc Genome-wide identification of genes regulated in trans by transposable element small interfering RNAs
    Andrea D McCue
    Department of Molecular Genetics and Center for RNA Biology The Ohio State University Columbus, OH, USA
    RNA Biol 10:1379-95. 2013
  3. pmc FACS-based purification of Arabidopsis microspores, sperm cells and vegetative nuclei
    Filipe Borges
    Instituto Gulbenkian de Ciencia, Rua da Quinta Grande 6, 2780 156, Oeiras, Portugal
    Plant Methods 8:44. 2012
  4. ncbi request reprint The epigenetic control of the Athila family of retrotransposons in Arabidopsis
    R Keith Slotkin
    Department of Plant Cellular and Molecular Biology, Ohio State University, USA
    Epigenetics 5:483-90. 2010
  5. doi request reprint Transposable element small RNAs as regulators of gene expression
    Andrea D McCue
    Department of Molecular Genetics and Center for RNA Biology, The Ohio State University, Columbus, OH 43210, USA
    Trends Genet 28:616-23. 2012
  6. pmc The initiation of epigenetic silencing of active transposable elements is triggered by RDR6 and 21-22 nucleotide small interfering RNAs
    Saivageethi Nuthikattu
    Department of Molecular Genetics, The Ohio State University, Columbus, Ohio 43210, USA
    Plant Physiol 162:116-31. 2013
  7. doi request reprint Developmental relaxation of transposable element silencing in plants: functional or byproduct?
    German Martinez
    The Department of Molecular Genetics and The Center for RNA Biology, The Ohio State University, Columbus, OH, USA
    Curr Opin Plant Biol 15:496-502. 2012
  8. doi request reprint Cytoplasmic connection of sperm cells to the pollen vegetative cell nucleus: potential roles of the male germ unit revisited
    Andrea D McCue
    Department of Molecular Genetics, The Ohio State University, Columbus, OH 43210, USA
    J Exp Bot 62:1621-31. 2011
  9. doi request reprint Analysis of retrotransposon activity in plants
    Christopher DeFraia
    Department of Molecular Genetics, The Ohio State University, Columbus, OH, USA
    Methods Mol Biol 1112:195-210. 2014

Collaborators

  • Andrea D McCue
  • Saivageethi Nuthikattu
  • Christopher DeFraia
  • Filipe Borges
  • German Martinez
  • Kaushik Panda
  • Erica N Thomas
  • Dalen Fultz
  • Rui Gardner
  • Sarah H Reeder
  • Robert A Martienssen
  • Leonor C Boavida
  • Jorg D Becker
  • Joseph P Calarco
  • Telma Lopes
  • Mauro Cresti
  • José A Feijó

Detail Information

Publications9

  1. pmc Gene expression and stress response mediated by the epigenetic regulation of a transposable element small RNA
    Andrea D McCue
    Department of Molecular Genetics, The Ohio State University, Columbus, Ohio, USA
    PLoS Genet 8:e1002474. 2012
    ..In addition, the ability of this TE siRNA to regulate a gene's expression in trans blurs the lines between TE and gene-regulating small RNAs...
  2. pmc Genome-wide identification of genes regulated in trans by transposable element small interfering RNAs
    Andrea D McCue
    Department of Molecular Genetics and Center for RNA Biology The Ohio State University Columbus, OH, USA
    RNA Biol 10:1379-95. 2013
    ....
  3. pmc FACS-based purification of Arabidopsis microspores, sperm cells and vegetative nuclei
    Filipe Borges
    Instituto Gulbenkian de Ciencia, Rua da Quinta Grande 6, 2780 156, Oeiras, Portugal
    Plant Methods 8:44. 2012
    ..abstract:..
  4. ncbi request reprint The epigenetic control of the Athila family of retrotransposons in Arabidopsis
    R Keith Slotkin
    Department of Plant Cellular and Molecular Biology, Ohio State University, USA
    Epigenetics 5:483-90. 2010
    ..This review explores what studying one of the largest transposable element families in one of the smallest plant genomes can tell us about the epigenetic regulation of the genome...
  5. doi request reprint Transposable element small RNAs as regulators of gene expression
    Andrea D McCue
    Department of Molecular Genetics and Center for RNA Biology, The Ohio State University, Columbus, OH 43210, USA
    Trends Genet 28:616-23. 2012
    ..Based on these two examples, we suggest that other TE-derived small RNAs regulate additional genes and propose that, through small RNAs, the epigenetic status of TEs could widely influence the genic transcriptome...
  6. pmc The initiation of epigenetic silencing of active transposable elements is triggered by RDR6 and 21-22 nucleotide small interfering RNAs
    Saivageethi Nuthikattu
    Department of Molecular Genetics, The Ohio State University, Columbus, Ohio 43210, USA
    Plant Physiol 162:116-31. 2013
    ....
  7. doi request reprint Developmental relaxation of transposable element silencing in plants: functional or byproduct?
    German Martinez
    The Department of Molecular Genetics and The Center for RNA Biology, The Ohio State University, Columbus, OH, USA
    Curr Opin Plant Biol 15:496-502. 2012
    ..In this opinion article, we review the known DRTS events and speculate on the function, if any, of DRTS in plants...
  8. doi request reprint Cytoplasmic connection of sperm cells to the pollen vegetative cell nucleus: potential roles of the male germ unit revisited
    Andrea D McCue
    Department of Molecular Genetics, The Ohio State University, Columbus, OH 43210, USA
    J Exp Bot 62:1621-31. 2011
    ..This review focuses on the nature of the sperm cell cytoplasmic projection and the potential communicative function of the male germ unit...
  9. doi request reprint Analysis of retrotransposon activity in plants
    Christopher DeFraia
    Department of Molecular Genetics, The Ohio State University, Columbus, OH, USA
    Methods Mol Biol 1112:195-210. 2014
    ....