Khuloud Jaqaman

Summary

Affiliation: The Scripps Research Institute
Country: USA

Publications

  1. ncbi request reprint Phenotypic clustering of yeast mutants based on kinetochore microtubule dynamics
    K Jaqaman
    Department of Cell Biology, The Scripps Research Institute, La Jolla, CA 92037, USA
    Bioinformatics 23:1666-73. 2007
  2. pmc Robust single-particle tracking in live-cell time-lapse sequences
    Khuloud Jaqaman
    Department of Cell Biology, The Scripps Research Institute, 10550 N Torrey Pines Rd, La Jolla, California 92037, USA
    Nat Methods 5:695-702. 2008
  3. pmc S. cerevisiae chromosomes biorient via gradual resolution of syntely between S phase and anaphase
    Eugenio Marco
    Department of Cell Biology, Harvard Medical School, Boston, MA 02115, USA
    Cell 154:1127-39. 2013
  4. pmc Comparative autoregressive moving average analysis of kinetochore microtubule dynamics in yeast
    Khuloud Jaqaman
    Department of Cell Biology, The Scripps Research Institute, La Jolla, California
    Biophys J 91:2312-25. 2006
  5. pmc plusTipTracker: Quantitative image analysis software for the measurement of microtubule dynamics
    Kathryn T Applegate
    The Scripps Research Institute, La Jolla, CA 92037, USA
    J Struct Biol 176:168-84. 2011
  6. pmc Cargo and dynamin regulate clathrin-coated pit maturation
    Dinah Loerke
    Department of Cell Biology, The Scripps Research Institute, La Jolla, CA, USA
    PLoS Biol 7:e57. 2009
  7. ncbi request reprint Linking data to models: data regression
    Khuloud Jaqaman
    Department of Cell Biology, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, California 92037, USA
    Nat Rev Mol Cell Biol 7:813-9. 2006
  8. pmc Yeast kinetochore microtubule dynamics analyzed by high-resolution three-dimensional microscopy
    J F Dorn
    Laboratory for Computational Cell Biology, Department of Cell Biology, The Scripps Research Institute, La Jolla, CA 92037, USA
    Biophys J 89:2835-54. 2005
  9. ncbi request reprint New space warping method for the simulation of large-scale macromolecular conformational changes
    Khuloud Jaqaman
    Department of Chemistry, Indiana University, Bloomington, Indiana 47405, USA
    J Comput Chem 23:484-91. 2002

Collaborators

Detail Information

Publications9

  1. ncbi request reprint Phenotypic clustering of yeast mutants based on kinetochore microtubule dynamics
    K Jaqaman
    Department of Cell Biology, The Scripps Research Institute, La Jolla, CA 92037, USA
    Bioinformatics 23:1666-73. 2007
    ..Our goal is to identify groups of kinetochore proteins with similar effects on MT dynamics, revealing pathways through which kinetochore proteins transform chemical and mechanical input signals into cues of MT regulation...
  2. pmc Robust single-particle tracking in live-cell time-lapse sequences
    Khuloud Jaqaman
    Department of Cell Biology, The Scripps Research Institute, 10550 N Torrey Pines Rd, La Jolla, California 92037, USA
    Nat Methods 5:695-702. 2008
    ..Both applications indicate the requirement for robust and complete tracking of dense particle fields to dissect the mechanisms of receptor organization at the level of the plasma membrane...
  3. pmc S. cerevisiae chromosomes biorient via gradual resolution of syntely between S phase and anaphase
    Eugenio Marco
    Department of Cell Biology, Harvard Medical School, Boston, MA 02115, USA
    Cell 154:1127-39. 2013
    ..Our results offer a revised view of mitotic progression in S. cerevisiae that augments the relevance of mechanistic information obtained in this powerful genetic system for mammalian mitosis. ..
  4. pmc Comparative autoregressive moving average analysis of kinetochore microtubule dynamics in yeast
    Khuloud Jaqaman
    Department of Cell Biology, The Scripps Research Institute, La Jolla, California
    Biophys J 91:2312-25. 2006
    ....
  5. pmc plusTipTracker: Quantitative image analysis software for the measurement of microtubule dynamics
    Kathryn T Applegate
    The Scripps Research Institute, La Jolla, CA 92037, USA
    J Struct Biol 176:168-84. 2011
    ..To illustrate the enhanced performance of the new software we thus compare computer-assembled +TIP-marked trajectories to manually-traced MT trajectories from the same movie used in Matov et al. (2010)...
  6. pmc Cargo and dynamin regulate clathrin-coated pit maturation
    Dinah Loerke
    Department of Cell Biology, The Scripps Research Institute, La Jolla, CA, USA
    PLoS Biol 7:e57. 2009
    ..From these data, we infer the existence of an endocytic restriction or checkpoint, responsive to cargo and regulated by dynamin...
  7. ncbi request reprint Linking data to models: data regression
    Khuloud Jaqaman
    Department of Cell Biology, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, California 92037, USA
    Nat Rev Mol Cell Biol 7:813-9. 2006
    ....
  8. pmc Yeast kinetochore microtubule dynamics analyzed by high-resolution three-dimensional microscopy
    J F Dorn
    Laboratory for Computational Cell Biology, Department of Cell Biology, The Scripps Research Institute, La Jolla, CA 92037, USA
    Biophys J 89:2835-54. 2005
    ..Based on these findings, we propose high-resolution light microscopy of centromere dynamics in G1 yeast cells as a sensitive assay for the regulation of single k-MT dynamics...
  9. ncbi request reprint New space warping method for the simulation of large-scale macromolecular conformational changes
    Khuloud Jaqaman
    Department of Chemistry, Indiana University, Bloomington, Indiana 47405, USA
    J Comput Chem 23:484-91. 2002
    ..It is shown that the transformation of [Ala16]+ in vacuo from linear to globular is captured efficiently using the space warping method...