Andrei S Rodin

Summary

Affiliation: Texas Medical Center
Country: USA

Publications

  1. pmc Mining genetic epidemiology data with Bayesian networks I: Bayesian networks and example application (plasma apoE levels)
    Andrei S Rodin
    Human Genetics Center, School of Public Health, University of Texas Health Science Center Houston, TX 77030, USA
    Bioinformatics 21:3273-8. 2005
  2. ncbi request reprint Translation of both complementary strands might govern early evolution of the genetic code
    Andrei S Rodin
    School of Public Health, University of Texas, Houston, TX 77030, USA
    In Silico Biol 7:309-18. 2007
  3. pmc One ancestor for two codes viewed from the perspective of two complementary modes of tRNA aminoacylation
    Andrei S Rodin
    Collegium Budapest, Institute for Advanced Study, Budapest, Hungary
    Biol Direct 4:4. 2009
  4. pmc Use of wrapper algorithms coupled with a random forests classifier for variable selection in large-scale genomic association studies
    Andrei S Rodin
    Human Genetics Center, School of Public Health, University of Texas Health Science Center, Houston, Texas, USA
    J Comput Biol 16:1705-18. 2009
  5. pmc On primordial sense-antisense coding
    Andrei S Rodin
    Human Genetics Center, School of Public Health, University of Texas, Houston, TX 77225, USA
    J Mol Evol 69:555-67. 2009
  6. pmc Systems biology data analysis methodology in pharmacogenomics
    Andrei S Rodin
    Human Genetics Center, School of Public Health, University of Texas Health Science Center, Houston, TX 77030, USA
    Pharmacogenomics 12:1349-60. 2011
  7. ncbi request reprint Defining relationships between the known members of the cytochrome P450 3A subfamily, including five putative chimpanzee members
    Eric T Williams
    Department of Biochemistry and Molecular Biology, Medical School, University of Texas at Houston, Houston, TX 77030, USA
    Mol Phylogenet Evol 33:300-8. 2004
  8. ncbi request reprint Partitioning of aminoacyl-tRNA synthetases in two classes could have been encoded in a strand-symmetric RNA world
    Sergei N Rodin
    Theoretical Biology Department, Beckman Research Institute of the City of Hope, Duarte, California 91010 3000, USA
    DNA Cell Biol 25:617-26. 2006
  9. ncbi request reprint Repositioning-dependent fate of duplicate genes
    Sergei N Rodin
    Theoretical Biology Department, Beckman Research Institute of the City of Hope, Duarte, CA 91010, USA
    DNA Cell Biol 24:529-42. 2005
  10. ncbi request reprint Origin of the genetic code: first aminoacyl-tRNA synthetases could replace isofunctional ribozymes when only the second base of codons was established
    Sergei N Rodin
    Theoretical Biology Department, Beckman Research Institute of the City of Hope, Duarte, California 91010 3000, USA
    DNA Cell Biol 25:365-75. 2006

Detail Information

Publications10

  1. pmc Mining genetic epidemiology data with Bayesian networks I: Bayesian networks and example application (plasma apoE levels)
    Andrei S Rodin
    Human Genetics Center, School of Public Health, University of Texas Health Science Center Houston, TX 77030, USA
    Bioinformatics 21:3273-8. 2005
    ..In this paper, we introduce the method of Belief (Bayesian) networks to the domain of genotype-to-phenotype analyses and provide an example application...
  2. ncbi request reprint Translation of both complementary strands might govern early evolution of the genetic code
    Andrei S Rodin
    School of Public Health, University of Texas, Houston, TX 77030, USA
    In Silico Biol 7:309-18. 2007
    ....
  3. pmc One ancestor for two codes viewed from the perspective of two complementary modes of tRNA aminoacylation
    Andrei S Rodin
    Collegium Budapest, Institute for Advanced Study, Budapest, Hungary
    Biol Direct 4:4. 2009
    ..Accordingly, in this communication we focus on the acceptor stem...
  4. pmc Use of wrapper algorithms coupled with a random forests classifier for variable selection in large-scale genomic association studies
    Andrei S Rodin
    Human Genetics Center, School of Public Health, University of Texas Health Science Center, Houston, Texas, USA
    J Comput Biol 16:1705-18. 2009
    ....
  5. pmc On primordial sense-antisense coding
    Andrei S Rodin
    Human Genetics Center, School of Public Health, University of Texas, Houston, TX 77225, USA
    J Mol Evol 69:555-67. 2009
    ..Mol Biol Evol 26:445-450, 2009), this could indeed be a "Rosetta stone" gene (Carter and Duax, Mol Cell 10:705-708, 2002) (eroded somewhat, though) for the SAS origin of the two aaRS classes...
  6. pmc Systems biology data analysis methodology in pharmacogenomics
    Andrei S Rodin
    Human Genetics Center, School of Public Health, University of Texas Health Science Center, Houston, TX 77030, USA
    Pharmacogenomics 12:1349-60. 2011
    ....
  7. ncbi request reprint Defining relationships between the known members of the cytochrome P450 3A subfamily, including five putative chimpanzee members
    Eric T Williams
    Department of Biochemistry and Molecular Biology, Medical School, University of Texas at Houston, Houston, TX 77030, USA
    Mol Phylogenet Evol 33:300-8. 2004
    ..e., mouse and rat), but is less useful between species of different orders (i.e., primate and rodent) or classes (i.e., mammal and avian)...
  8. ncbi request reprint Partitioning of aminoacyl-tRNA synthetases in two classes could have been encoded in a strand-symmetric RNA world
    Sergei N Rodin
    Theoretical Biology Department, Beckman Research Institute of the City of Hope, Duarte, California 91010 3000, USA
    DNA Cell Biol 25:617-26. 2006
    ..The principle of evolutionary continuity suggests that their protein successors also arose on complementary strands. Our analyses support this hypothesis...
  9. ncbi request reprint Repositioning-dependent fate of duplicate genes
    Sergei N Rodin
    Theoretical Biology Department, Beckman Research Institute of the City of Hope, Duarte, CA 91010, USA
    DNA Cell Biol 24:529-42. 2005
    ..Accordingly, we propose a new CpG-focused measure of selection that is insensitive to translocation-caused biases in mutagenesis...
  10. ncbi request reprint Origin of the genetic code: first aminoacyl-tRNA synthetases could replace isofunctional ribozymes when only the second base of codons was established
    Sergei N Rodin
    Theoretical Biology Department, Beckman Research Institute of the City of Hope, Duarte, California 91010 3000, USA
    DNA Cell Biol 25:365-75. 2006
    ....