T Raudsepp

Summary

Affiliation: Texas A and M University
Country: USA

Publications

  1. pmc Stallion sperm transcriptome comprises functionally coherent coding and regulatory RNAs as revealed by microarray analysis and RNA-seq
    Pranab J Das
    Department of Veterinary Integrative Biosciences, Texas A and M University, College Station, Texas, United States of America
    PLoS ONE 8:e56535. 2013
  2. pmc Genome-wide association study implicates testis-sperm specific FKBP6 as a susceptibility locus for impaired acrosome reaction in stallions
    Terje Raudsepp
    Department of Veterinary Integrative Biosciences, Texas A and M University, College Station, Texas, USA
    PLoS Genet 8:e1003139. 2012
  3. doi The pseudoautosomal region and sex chromosome aneuploidies in domestic species
    T Raudsepp
    Department of Veterinary Integrative Biosciences, College of Veterinary Medicine and Biomedical Sciences, Texas A and M University, College Station, Texas 77843, USA
    Sex Dev 6:72-83. 2012
  4. pmc A high resolution RH map of the bovine major histocompatibility complex
    Candice L Brinkmeyer-Langford
    Department of Veterinary Integrative Biosciences, College of Veterinary Medicine, Texas A and M University, College Station, Texas 77843 4458, USA
    BMC Genomics 10:182. 2009
  5. pmc A 4,103 marker integrated physical and comparative map of the horse genome
    T Raudsepp
    Department of Veterinary Integrative Biosciences, Texas A and M University, College Station, TX 77843, USA
    Cytogenet Genome Res 122:28-36. 2008
  6. doi Molecular heterogeneity of XY sex reversal in horses
    T Raudsepp
    Department of Veterinary Integrative Biosciences, College of Veterinary Medicine, Texas A and M University, College Station, TX 77843 4458, USA
    Anim Genet 41:41-52. 2010
  7. ncbi The horse pseudoautosomal region (PAR): characterization and comparison with the human, chimp and mouse PARs
    T Raudsepp
    Department of Veterinary Integrative Biosciences, College of Veterinary Medicine and Biomedical Sciences, Texas A and M University, College Station, TX 77843 4458, USA
    Cytogenet Genome Res 121:102-9. 2008
  8. ncbi Thirty-five new equine microsatellite loci assigned to genetic linkage and radiation hybrid maps
    J R Mickelson
    Department of Veterinary Biosciences, College of Veterinary Medicine, University of Minnesota, 295 AS VM, 1988 Fitch Ave, St Paul, MN 55108, USA
    Anim Genet 35:481-4. 2004
  9. ncbi Sixty-seven new equine microsatellite loci assigned to the equine radiation hybrid map
    M L Wagner
    Department of Veterinary Biosciences, College of Veterinary Medicine, University of Minnesota, 295 AS VM, 1988 Fitch Ave, St Paul, MN 55108, USA
    Anim Genet 35:484-6. 2004
  10. ncbi Radiation hybrid mapping of 63 previously unreported equine microsatellite loci
    M L Wagner
    Department of Veterinary Pathobiology, College of Veterinary Medicine, University of Minnesota, 1988 Fitch Ave, St Paul, MN 55108, USA
    Anim Genet 35:159-62. 2004

Collaborators

Detail Information

Publications34

  1. pmc Stallion sperm transcriptome comprises functionally coherent coding and regulatory RNAs as revealed by microarray analysis and RNA-seq
    Pranab J Das
    Department of Veterinary Integrative Biosciences, Texas A and M University, College Station, Texas, United States of America
    PLoS ONE 8:e56535. 2013
    ..The findings suggest that the rich repertoire of coding and non-coding RNAs in stallion sperm is not a random remnant from spermatogenesis in testes but a selectively retained and functionally coherent collection of RNAs...
  2. pmc Genome-wide association study implicates testis-sperm specific FKBP6 as a susceptibility locus for impaired acrosome reaction in stallions
    Terje Raudsepp
    Department of Veterinary Integrative Biosciences, Texas A and M University, College Station, Texas, USA
    PLoS Genet 8:e1003139. 2012
    ..Successful use of sperm as a source of DNA and RNA propagates non-invasive sample procurement for fertility genomics in animals and humans...
  3. doi The pseudoautosomal region and sex chromosome aneuploidies in domestic species
    T Raudsepp
    Department of Veterinary Integrative Biosciences, College of Veterinary Medicine and Biomedical Sciences, Texas A and M University, College Station, Texas 77843, USA
    Sex Dev 6:72-83. 2012
    ..Recent evidence about the likely involvement of PAR genes in placenta formation, early embryonic development and genomic imprinting are presented...
  4. pmc A high resolution RH map of the bovine major histocompatibility complex
    Candice L Brinkmeyer-Langford
    Department of Veterinary Integrative Biosciences, College of Veterinary Medicine, Texas A and M University, College Station, Texas 77843 4458, USA
    BMC Genomics 10:182. 2009
    ..0 assembly and spanning the IIa-III-I and IIb regions of the bovine MHC were mapped on a 12,000rad bovine radiation hybrid (RH) panel to evaluate the different assemblies of the bovine genome sequence...
  5. pmc A 4,103 marker integrated physical and comparative map of the horse genome
    T Raudsepp
    Department of Veterinary Integrative Biosciences, Texas A and M University, College Station, TX 77843, USA
    Cytogenet Genome Res 122:28-36. 2008
    ..It will also serve as a tool to identify genes governing health, disease and performance traits in horses and assist us in understanding the evolution of the equine genome in relation to other species...
  6. doi Molecular heterogeneity of XY sex reversal in horses
    T Raudsepp
    Department of Veterinary Integrative Biosciences, College of Veterinary Medicine, Texas A and M University, College Station, TX 77843 4458, USA
    Anim Genet 41:41-52. 2010
    ..Finally, in contrast to the Y-linked SRY-negative form of equine XY sex reversal, the molecular causes of SRY-positive XY mares (5 cases) remain as yet undefined...
  7. ncbi The horse pseudoautosomal region (PAR): characterization and comparison with the human, chimp and mouse PARs
    T Raudsepp
    Department of Veterinary Integrative Biosciences, College of Veterinary Medicine and Biomedical Sciences, Texas A and M University, College Station, TX 77843 4458, USA
    Cytogenet Genome Res 121:102-9. 2008
    ..Although striking differences like those observed between human and mouse may be rare, variations similar to those seen between horse and human may be prevalent among mammals...
  8. ncbi Thirty-five new equine microsatellite loci assigned to genetic linkage and radiation hybrid maps
    J R Mickelson
    Department of Veterinary Biosciences, College of Veterinary Medicine, University of Minnesota, 295 AS VM, 1988 Fitch Ave, St Paul, MN 55108, USA
    Anim Genet 35:481-4. 2004
  9. ncbi Sixty-seven new equine microsatellite loci assigned to the equine radiation hybrid map
    M L Wagner
    Department of Veterinary Biosciences, College of Veterinary Medicine, University of Minnesota, 295 AS VM, 1988 Fitch Ave, St Paul, MN 55108, USA
    Anim Genet 35:484-6. 2004
  10. ncbi Radiation hybrid mapping of 63 previously unreported equine microsatellite loci
    M L Wagner
    Department of Veterinary Pathobiology, College of Veterinary Medicine, University of Minnesota, 1988 Fitch Ave, St Paul, MN 55108, USA
    Anim Genet 35:159-62. 2004
  11. ncbi A 1.3-Mb interval map of equine homologs of HSA2
    M L Wagner
    Department of Veterinary Biosciences, College of Veterinary Medicine, University of Minnesota, St Paul, MN 55108, USA
    Cytogenet Genome Res 112:227-34. 2006
    ..3 Mb. Comparative maps of ECA6p, ECA15, and ECA18 with human, chimpanzee, dog, mouse, rat, and chicken genomes reveal blocks of conserved synteny across mammals and vertebrates...
  12. doi A BAC contig map over the proximal approximately 3.3 Mb region of horse chromosome 21
    C Brinkmeyer-Langford
    Department of Veterinary Integrative Biomedical Sciences, College of Veterinary Medicine, Texas A and M University, College Station, TX, USA
    Cytogenet Genome Res 120:164-72. 2008
    ....
  13. ncbi Correspondence of human chromosomes 9, 12, 15, 16, 19 and 20 with donkey chromosomes refines homology between horse and donkey karyotypes
    T Raudsepp
    Department of Veterinary Anatomy and Public Health, College of Veterinary Medicine, Texas A and M University, College Station 77843, USA
    Chromosome Res 9:623-9. 2001
    ..Overall, the findings mark the beginning of an ordered study of comparative organization of genomes/karyotypes of the equids, that can shed light on karyotype evolution and ancestral chromosomal condition in the Perissodactyls...
  14. doi Comparative organization and gene expression profiles of the porcine pseudoautosomal region
    P J Das
    Department of Veterinary Integrative Biosciences, College of Veterinary Medicine and Biomedical Sciences, Texas A and M University, College Station, TX 77843 4458, USA
    Cytogenet Genome Res 141:26-36. 2013
    ..The findings advance the knowledge about the comparative organization of the PAR in mammals and suggest that the region might have important functions in early development in pigs. ..
  15. doi Cytogenetic and molecular characterization of Y isochromosome in a 63XO/64Xi(Yq) mosaic karyotype of an intersex horse
    P J Das
    Department of Veterinary Integrative Biosciences, College of Veterinary Medicine and Biomedical Sciences, Texas A and M University, College Station, Texas 77843, USA
    Sex Dev 6:117-27. 2012
    ..Genetic and phenotypic implications of Y isochromosome formation in other mammals are discussed in the light of the diversity of Y chromosome organization between species...
  16. doi The horse genome
    B P Chowdhary
    Department of Veterinary Integrative Biosciences, College of Veterinary Medicine and Biomedical Sciences, Texas A and M University, College Station, Tex 77843 4458, USA
    Genome Dyn 2:97-110. 2006
    ..The motivation and support of the ultimate benefactors - the equine industry - from this huge endeavor will however be pivotal...
  17. ncbi Comparative FISH mapping of 32 loci reveals new homologous regions between donkey and horse karyotypes
    T Raudsepp
    Department of Veterinary Anatomy and Public Health, College of Veterinary Medicine, Texas A and M University, College Station 77843, USA
    Cytogenet Cell Genet 94:180-5. 2001
    ....
  18. doi Characterization of the bovine pseudoautosomal region and comparison with sheep, goat, and other mammalian pseudoautosomal regions
    P J Das
    Department of Veterinary Integrative Biosciences, College of Veterinary Medicine and Biomedical Sciences, Texas A and M University, College Station, TX 77843 4458, USA
    Cytogenet Genome Res 126:139-47. 2009
    ..The gene map of the cattle PAR adds to our knowledge about the comparative organization and evolution of the eutherian PAR and aids the sequencing, sequence assembly, and annotation of the terminal region of BTAXq...
  19. ncbi An ordered BAC contig map of the equine major histocompatibility complex
    A L Gustafson
    Department of Veterinary Anatomy and Public Health, College of Veterinary Medicine, Texas A and M University, College Station, TX 77843 4458, USA
    Cytogenet Genome Res 102:189-95. 2003
    ..These data indicate that the equine MHC is a single gene-dense region similar in structure and organization to the human MHC and is not disrupted as in ruminants and pigs...
  20. ncbi Radiation hybrid mapping of 75 previously unreported equine microsatellite loci
    M L Wagner
    Department of Veterinary Pathobiology, College of Veterinary Medicine, University of Minnesota, MN, USA
    Anim Genet 35:68-71. 2004
  21. ncbi Comparative mapping in equids: the asine X chromosome is rearranged compared to horse and Hartmann's mountain zebra
    T Raudsepp
    Department of Veterinary Anatomy and Public Health, Texas A and M University, College Station, TX, USA
    Cytogenet Genome Res 96:206-9. 2002
    ..The study adds two new markers to horse, 11 to donkey and 12 to Hartmann's zebra gene maps, thus contributing to the expansion of comparative maps in the equids...
  22. ncbi Chromosome painting in farm, pet and wild animal species
    B P Chowdhary
    Department of Veterinary Anatomy and Public Health, College of Veterinary Medicine, Texas A and M University, College Station, TX 77843 4458, USA
    Methods Cell Sci 23:37-55. 2001
    ..Importance of comparative painting in setting the stage for rapid development of gene maps in a number of economically important species is elaborated...
  23. ncbi Cytogenetic analysis of California condor (Gymnogyps californianus) chromosomes: comparison with chicken (Gallus gallus) macrochromosomes
    T Raudsepp
    Department of Veterinary Anatomy and Public Health, Texas A and M University, College Station 77843, USA
    Cytogenet Genome Res 98:54-60. 2002
    ..These findings significantly advance the effort to study the chondrodystrophy that is responsible for over ten percent mortality in the condor...
  24. ncbi Assignment of six genes to bovine chromosomes 5 and 16 by fluorescence in situ hybridization, radiation hybrid mapping and genetic linkage analysis
    G R Hansen
    Department of Animal Science, Texas A and M University, College Station, TX, USA
    Cytogenet Genome Res 116:194-7. 2007
    ..4 cM from BM6026 and 19.1 cM from BL23 on the genetic linkage map. MYF5 (62.6 cR), WNT10B (319.5 cR), WIF1 (500.8 cR) and MMP19 (701.2 cR) were also integrated into the 5000(Rad) radiation hybrid map...
  25. ncbi Isolation, characterization and FISH assignments of horse BAC clones containing type I and II markers
    D Mariat
    INRA Centre de Recherche de Jouy, , , Jouy-en-Josas, France
    Cytogenet Cell Genet 92:144-8. 2001
    ..The success of the approach in the production of integrative anchor loci and their potential use in localization and analysis of traits of interest by the candidate gene and positional cloning approach, are discussed...
  26. ncbi Genetic mapping of GBE1 and its association with glycogen storage disease IV in American Quarter horses
    T L Ward
    Department of Veterinary Pathobiology, University of Minnesota, St Paul, MN 55108, USA
    Cytogenet Genome Res 102:201-6. 2003
    ..This data provides strong molecular genetic support for the candidacy of the GBE1 locus in equine GSD IV...
  27. ncbi Chromosomal assignments for the equine AMPK family genes
    P K Dranchak
    Department of Veterinary Biomedical Sciences, University of Minnesota, 1988 Fitch Ave, St Paul, 55108, USA
    Anim Genet 37:293-4. 2006
  28. ncbi Construction of a medium-density horse gene map
    M Perrocheau
    Département de Génétique Animale, Laboratoire de Génétique Biochimique et de Cytogénétique, Centre de Recherches de Jouy, INRA, 78350, Jouy en Josas, France
    Anim Genet 37:145-55. 2006
    ..An enhanced resolution of conserved and rearranged chromosomal segments presented in this study provides clarification of chromosome evolution history...
  29. ncbi FISH mapping of the IGF2 gene in horse and donkey-detection of homoeology with HSA11
    T Raudsepp
    Department of Animal Breeding and Genetics, Swedish University of Agricultural Sciences, Box 7023, S 750 07 Uppsala, Sweden
    Mamm Genome 8:569-72. 1997
    ..Comparison of the hitherto known physical locations of IGF2 in different species, viz. human, cattle, sheep, horse, and donkey, shows that this gene tends to maintain a terminal location on the chromosome arm...
  30. ncbi SNP detection and radiation hybrid mapping in horses of nine candidate genes for temperament
    Y Momozawa
    Laboratory of Veterinary Ethology, The University of Tokyo, Tokyo 113 8657, Japan
    Anim Genet 38:81-3. 2007
  31. ncbi Linkage and comparative mapping of the locus controlling susceptibility towards E. COLI F4ab/ac diarrhoea in pigs
    C B Jørgensen
    Department of Animal Science and Animal Health, The Royal Veterinary and Agricultural University, Frederiksberg, Denmark
    Cytogenet Genome Res 102:157-62. 2003
    ..Two candidate regions on human chromosome 3 have been identified that are likely to harbour the human homologue of the gene responsible for susceptibility towards E. COLI F4ab/ac diarrhoea in pigs...
  32. ncbi Sequence, detection of polymorphisms and radiation hybrid mapping of the equine catechol-o-methyltransferase gene
    Y Momozawa
    Laboratory of Veterinary Ethology, The University of Tokyo, Tokyo 113 8657, Japan
    Anim Genet 36:190. 2005
  33. ncbi Chromosomal distribution, localization and expression of the human endogenous retrovirus ERV9
    A C Svensson
    Uppsala Genetic Center, Swedish University of Agricultural Sciences, Uppsala, Sweden
    Cytogenet Cell Genet 92:89-96. 2001
    ..However, the level of expression varied in the same tissues among different individuals indicating that ERV9 mRNA expression probably is inducible in certain tissues or at various cell stages...
  34. ncbi Structure and chromosomal assignment of the sterol 12alpha-hydroxylase gene (CYP8B1) in human and mouse: eukaryotic cytochrome P-450 gene devoid of introns
    M Gafvels
    Division of Clinical Chemistry, Karolinska Institute at Huddinge University Hospital, Huddinge, S 141 86, Sweden
    Genomics 56:184-96. 1999
    ..This is the first mammalian cytochrome P-450 gene reported to lack introns. The importance of this structural feature for evolution and gene regulation is discussed...