Patricia Klein

Summary

Affiliation: Texas A and M University
Country: USA

Publications

  1. pmc Genetic structure and linkage disequilibrium in a diverse, representative collection of the C4 model plant, Sorghum bicolor
    Yi Hong Wang
    Department of Biology, University of Louisiana at Lafayette, Louisiana 70504, USA
    G3 (Bethesda) 3:783-93. 2013
  2. ncbi request reprint Sequence-based alignment of sorghum chromosome 3 and rice chromosome 1 reveals extensive conservation of gene order and one major chromosomal rearrangement
    Patricia E Klein
    Institute for Plant Genomics and Biotechnology, Texas A and M University, College Station, TX 77843, USA
    Plant J 34:605-21. 2003
  3. pmc Functional annotation of the transcriptome of Sorghum bicolor in response to osmotic stress and abscisic acid
    Diana V Dugas
    Department of Horticulture, Texas A and M University, College Station, TX 77843, USA
    BMC Genomics 12:514. 2011
  4. pmc A BAC pooling strategy combined with PCR-based screenings in a large, highly repetitive genome enables integration of the maize genetic and physical maps
    Young Sun Yim
    Division of Plant Sciences, University of Missouri, 1 31 Agriculture, Columbia, MO, USA
    BMC Genomics 8:47. 2007
  5. pmc Integration of hybridization-based markers (overgos) into physical maps for comparative and evolutionary explorations in the genus Oryza and in Sorghum
    Barbara L Hass-Jacobus
    Department of Agronomy, Purdue University, West Lafayette, Indiana 47907, USA
    BMC Genomics 7:199. 2006
  6. ncbi request reprint Sorghum stay-green QTL individually reduce post-flowering drought-induced leaf senescence
    Karen Harris
    Department of Biochemistry and Biophysics, Texas A and M University, College Station, Texas 77843, USA
    J Exp Bot 58:327-38. 2007
  7. pmc Extensive variation in the density and distribution of DNA polymorphism in sorghum genomes
    Joseph Evans
    Department of Biochemistry and Biophysics, Texas A and M University, College Station, Texas, United States of America
    PLoS ONE 8:e79192. 2013

Collaborators

  • Hari D Upadhyaya
  • Sayed Mohammad Ebrahim Sahraeian
  • Doreen Ware
  • P K Subudhi
  • Joseph Evans
  • Yi Hong Wang
  • Robert R Klein
  • Diana V Dugas
  • John Mullet
  • Young Sun Yim
  • Karen Harris
  • Barbara L Hass-Jacobus
  • Brock Weers
  • Ryan F McCormick
  • Sara N Olson
  • Josie Hilley
  • William Rooney
  • Daryl Morishige
  • A Millie Burrell
  • Marcela K Monaco
  • Andrew Olsen
  • Sunita Kumari
  • Pamela Close
  • Edward H Coe
  • Hector Sanchez-Villeda
  • Andrew Borrell
  • John E Mullet
  • David Jordan
  • Henry Nguyen
  • Patricia Moak
  • Darrell Rosenow
  • Robert Klein
  • Zheiwei Fang
  • Theresa A Musket
  • Mary L Schaeffer
  • Jack M Gardiner
  • Michael D McMullen
  • Georgia L Davis
  • Fariborz Rakhshan
  • Jer Young Lin
  • Joshua Stein
  • Navdeep Gill
  • Dave Kudrna
  • Brian Abernathy
  • Jose Luis Goicoechea
  • Hye Ran Kim
  • Bin Zhou
  • Jason G Walling
  • Bonnie Hurwitz
  • Rod A Wing
  • Jetty Siva S Ammiraju
  • Scott A Jackson
  • Rick Westerman
  • Montona Futrell-Griggs
  • Abhijit Sanyal
  • Mei Zhong Luo
  • Phillip San Miguel

Detail Information

Publications7

  1. pmc Genetic structure and linkage disequilibrium in a diverse, representative collection of the C4 model plant, Sorghum bicolor
    Yi Hong Wang
    Department of Biology, University of Louisiana at Lafayette, Louisiana 70504, USA
    G3 (Bethesda) 3:783-93. 2013
    ..5-35.5 kb were detected on chromosomes 1, 2, 9, and 10. We examined the genes encoded within each block to provide a first look at candidates such as homologs of GS3 and FT that may indicate a selective sweep during sorghum domestication...
  2. ncbi request reprint Sequence-based alignment of sorghum chromosome 3 and rice chromosome 1 reveals extensive conservation of gene order and one major chromosomal rearrangement
    Patricia E Klein
    Institute for Plant Genomics and Biotechnology, Texas A and M University, College Station, TX 77843, USA
    Plant J 34:605-21. 2003
    ....
  3. pmc Functional annotation of the transcriptome of Sorghum bicolor in response to osmotic stress and abscisic acid
    Diana V Dugas
    Department of Horticulture, Texas A and M University, College Station, TX 77843, USA
    BMC Genomics 12:514. 2011
    ....
  4. pmc A BAC pooling strategy combined with PCR-based screenings in a large, highly repetitive genome enables integration of the maize genetic and physical maps
    Young Sun Yim
    Division of Plant Sciences, University of Missouri, 1 31 Agriculture, Columbia, MO, USA
    BMC Genomics 8:47. 2007
    ..Finally, they validate assemblies based solely on BAC fingerprints. We employed a six-dimensional BAC pooling strategy in combination with a high-throughput PCR-based screening method to anchor the maize genetic and physical maps...
  5. pmc Integration of hybridization-based markers (overgos) into physical maps for comparative and evolutionary explorations in the genus Oryza and in Sorghum
    Barbara L Hass-Jacobus
    Department of Agronomy, Purdue University, West Lafayette, Indiana 47907, USA
    BMC Genomics 7:199. 2006
    ..Similar studies were undertaken in Sorghum bicolor, a species which diverged from cultivated rice 40-50 million years ago...
  6. ncbi request reprint Sorghum stay-green QTL individually reduce post-flowering drought-induced leaf senescence
    Karen Harris
    Department of Biochemistry and Biophysics, Texas A and M University, College Station, Texas 77843, USA
    J Exp Bot 58:327-38. 2007
    ..The RTx7000 NILs created in this study provide the starting point for in-depth analysis of stay-green physiology, interaction among stay-green QTL and map-based cloning of the genes that underlie this trait...
  7. pmc Extensive variation in the density and distribution of DNA polymorphism in sorghum genomes
    Joseph Evans
    Department of Biochemistry and Biophysics, Texas A and M University, College Station, Texas, United States of America
    PLoS ONE 8:e79192. 2013
    ..Overall, sorghum chromosomes contain distal euchromatic regions characterized by extensive, localized variation in DNA polymorphism density, and large pericentromeric regions of low gene density, diversity, and recombination. ..