James A Coffman

Summary

Affiliation: Stowers Institute for Medical Research
Country: USA

Publications

  1. pmc Sea urchin vault structure, composition, and differential localization during development
    Phoebe L Stewart
    Department of Molecular Physiology and Biophysics, Vanderbilt University Medical Center, Nashville, TN, USA
    BMC Dev Biol 5:3. 2005
  2. ncbi request reprint Oral-aboral axis specification in the sea urchin embryo. I. Axis entrainment by respiratory asymmetry
    J A Coffman
    Stowers Institute for Medical Research, 1000 East 50th Street, Kansas City, Missouri 64110, USA
    Dev Biol 230:18-28. 2001
  3. ncbi request reprint Oral-aboral axis specification in the sea urchin embryo II. Mitochondrial distribution and redox state contribute to establishing polarity in Strongylocentrotus purpuratus
    James A Coffman
    Stowers Institute for Medical Research, Kansas City, MO 64110, USA
    Dev Biol 273:160-71. 2004
  4. pmc Evaluation of developmental phenotypes produced by morpholino antisense targeting of a sea urchin Runx gene
    James A Coffman
    Stowers Institute for Medical Research, 1000 E, 50th Street, Kansas City, MO 64110, USA
    BMC Biol 2:6. 2004
  5. ncbi request reprint Cell cycle development
    James A Coffman
    Stowers Institute for Medical Research, 1000 East 50th Street, Kansas City, MO 64110, USA
    Dev Cell 6:321-7. 2004
  6. ncbi request reprint Runx transcription factors and the developmental balance between cell proliferation and differentiation
    James A Coffman
    Stowers Institute for Medical Research, 1000 E 50th Street, Kansas City, MO 64110, USA
    Cell Biol Int 27:315-24. 2003
  7. pmc CBFbeta is a facultative Runx partner in the sea urchin embryo
    Anthony J Robertson
    Stowers Institute for Medical Research, Kansas City, MO 64110, USA
    BMC Biol 4:4. 2006
  8. pmc Runx-dependent expression of PKC is critical for cell survival in the sea urchin embryo
    Carrie Dickey-Sims
    Stowers Institute for Medical Research, 1000 E, 50th Street, Kansas City, Missouri 64110, USA
    BMC Biol 3:18. 2005
  9. pmc The evolution of Runx genes I. A comparative study of sequences from phylogenetically diverse model organisms
    Jessica Rennert
    Stowers Institute for Medical Research, 1000 E, 50th Street, Kansas City, MO 64110, USA
    BMC Evol Biol 3:4. 2003
  10. ncbi request reprint The expression of SpRunt during sea urchin embryogenesis
    Anthony J Robertson
    Stowers Institute for Medical Research, 1000 East 50th Street, Kansas City, MO 64110, USA
    Mech Dev 117:327-30. 2002

Collaborators

Detail Information

Publications18

  1. pmc Sea urchin vault structure, composition, and differential localization during development
    Phoebe L Stewart
    Department of Molecular Physiology and Biophysics, Vanderbilt University Medical Center, Nashville, TN, USA
    BMC Dev Biol 5:3. 2005
    ..elegans, neither of which possesses vaults. Here we compare the structures of sea urchin and mammalian vaults and analyze the subcellular distribution of vaults during sea urchin embryogenesis...
  2. ncbi request reprint Oral-aboral axis specification in the sea urchin embryo. I. Axis entrainment by respiratory asymmetry
    J A Coffman
    Stowers Institute for Medical Research, 1000 East 50th Street, Kansas City, Missouri 64110, USA
    Dev Biol 230:18-28. 2001
    ..These findings are discussed with reference to earlier work on both oral-aboral axis specification and P3A2 and used to develop a testable model of the mechanism of oral-aboral axis specification in the sea urchin embryo...
  3. ncbi request reprint Oral-aboral axis specification in the sea urchin embryo II. Mitochondrial distribution and redox state contribute to establishing polarity in Strongylocentrotus purpuratus
    James A Coffman
    Stowers Institute for Medical Research, Kansas City, MO 64110, USA
    Dev Biol 273:160-71. 2004
    ....
  4. pmc Evaluation of developmental phenotypes produced by morpholino antisense targeting of a sea urchin Runx gene
    James A Coffman
    Stowers Institute for Medical Research, 1000 E, 50th Street, Kansas City, MO 64110, USA
    BMC Biol 2:6. 2004
    ..Here we extend the functional analysis of SpRunt, using morpholino antisense oligonucleotides (morpholinos) to interfere with SpRunt expression in the embryo...
  5. ncbi request reprint Cell cycle development
    James A Coffman
    Stowers Institute for Medical Research, 1000 East 50th Street, Kansas City, MO 64110, USA
    Dev Cell 6:321-7. 2004
    ..A clear indication from the meeting is that this research is changing the conventional wisdom on both cell cycle control and development...
  6. ncbi request reprint Runx transcription factors and the developmental balance between cell proliferation and differentiation
    James A Coffman
    Stowers Institute for Medical Research, 1000 E 50th Street, Kansas City, MO 64110, USA
    Cell Biol Int 27:315-24. 2003
    ....
  7. pmc CBFbeta is a facultative Runx partner in the sea urchin embryo
    Anthony J Robertson
    Stowers Institute for Medical Research, Kansas City, MO 64110, USA
    BMC Biol 4:4. 2006
    ..CBFbeta allosterically enhances Runx DNA binding but does not bind DNA itself. We report the initial characterization of SpCBFbeta, the heterodimeric partner of SpRunt-1 from the sea urchin Stronylocentrotus purpuratus...
  8. pmc Runx-dependent expression of PKC is critical for cell survival in the sea urchin embryo
    Carrie Dickey-Sims
    Stowers Institute for Medical Research, 1000 E, 50th Street, Kansas City, Missouri 64110, USA
    BMC Biol 3:18. 2005
    ..Previously we showed that embryos depleted of SpRunt-1 arrest development at early gastrula stage and underexpress the conventional protein kinase C SpPKC1...
  9. pmc The evolution of Runx genes I. A comparative study of sequences from phylogenetically diverse model organisms
    Jessica Rennert
    Stowers Institute for Medical Research, 1000 E, 50th Street, Kansas City, MO 64110, USA
    BMC Evol Biol 3:4. 2003
    ..Studies of Runx genes and proteins in model organisms indicate that they are key transcriptional regulators of animal development. However, little is known about Runx gene evolution...
  10. ncbi request reprint The expression of SpRunt during sea urchin embryogenesis
    Anthony J Robertson
    Stowers Institute for Medical Research, 1000 East 50th Street, Kansas City, MO 64110, USA
    Mech Dev 117:327-30. 2002
    ..These data suggest that SpRunt expression is enhanced in proliferating cells...
  11. ncbi request reprint Identification of sequence-specific DNA binding proteins
    James A Coffman
    Stowers Institute for Medical Research, Kansas City, Missouri 64110, USA
    Methods Cell Biol 74:653-75. 2004
  12. pmc Cis-regulatory control of the nodal gene, initiator of the sea urchin oral ectoderm gene network
    Jongmin Nam
    Division of Biology, California Institute of Technology, Pasadena, CA 91125, USA
    Dev Biol 306:860-9. 2007
    ....
  13. ncbi request reprint The sea urchin kinome: a first look
    Cynthia A Bradham
    DCMB Group, Duke University, Box 91000, Durham, NC 27708, USA
    Dev Biol 300:180-93. 2006
    ..These results support the strength of this nonchordate deuterostome as a pivotal developmental and evolutionary model organism...
  14. pmc The sea urchin stem-loop-binding protein: a maternally expressed protein that probably functions in expression of multiple classes of histone mRNA
    Anthony J Robertson
    Program in Molecular Biology and Biotechnology, University of North Carolina, Chapel Hill 27599, USA
    Nucleic Acids Res 32:811-8. 2004
    ..SuSLBP expressed by in vitro translation does not bind the stem-loop RNA, suggesting that suSLBP is modified to activate RNA binding in sea urchin embryos...
  15. ncbi request reprint Mitochondria, redox signaling and axis specification in metazoan embryos
    James A Coffman
    Mount Desert Island Biological Laboratory, Salisbury Cove, ME 04672, USA
    Dev Biol 308:266-80. 2007
    ....
  16. ncbi request reprint The genomic underpinnings of apoptosis in Strongylocentrotus purpuratus
    Anthony J Robertson
    Mount Desert Island Biological Laboratory, Salisbury Cove, ME 04672, USA
    Dev Biol 300:321-34. 2006
    ....
  17. ncbi request reprint The genomic repertoire for cell cycle control and DNA metabolism in S. purpuratus
    Antonio Fernandez-Guerra
    Observatoire Océanologique de Banyuls Laboratoire Arago, CNRS UMR7628 UPMC, 66650 Banyuls sur mer, France
    Dev Biol 300:238-51. 2006
    ..The set of genes uncovered in this analysis of the S. purpuratus genome should enhance future research on cell cycle control and developmental regulation in this model...
  18. pmc The genome of the sea urchin Strongylocentrotus purpuratus
    Erica Sodergren
    Science 314:941-52. 2006
    ..This echinoderm genome provides an evolutionary outgroup for the chordates and yields insights into the evolution of deuterostomes...