Research Topics
| Jing WangSummaryAffiliation: State University of New York Country: USA Publications
| Collaborators
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Detail Information
Publications
Penalized weighted least-squares approach to sinogram noise reduction and image reconstruction for low-dose X-ray computed tomographyJing Wang
Department of Radiology, State University of New York, Stony Brook, NY 11794, USA
IEEE Trans Med Imaging 25:1272-83. 2006..The KL-PWLS implementation may have the advantage in terms of computation for high-resolution dynamic low-dose CT imaging...
Dynamic contrast-enhanced magnetic resonance images of the kidneyDongjiao Lv
Biomedical Engineering Department, Peking University
IEEE Eng Med Biol Mag 27:36-41. 2008- Multiscale penalized weighted least-squares sinogram restoration for low-dose X-ray computed tomographyJing Wang
Dept of Radiol, State Univ of New York, Stony Brook, NY 11794, USA
Conf Proc IEEE Eng Med Biol Soc 1:3282-5. 2006..The effectiveness of the proposed multiscale PWLS method is validated by an experimental study. The gain by multiscale approach over single-scale means is quantified by noise-resolution tradeoff measures... 
Multiscale penalized weighted least-squares sinogram restoration for low-dose x-ray computed tomographyJing Wang
Departments of Radiology and Physics and Astronomy, 4L 120 Health Sciences Center, State University of New York, Stony Brook, NY 11794, USA
IEEE Trans Biomed Eng 55:1022-31. 2008..The effectiveness of the proposed multiscale PWLS method is validated by both computer simulations and experimental studies. The gain by multiscale approach over single scale means is quantified by noise-resolution tradeoff measures...- An alternative solution to the nonuniform noise propagation problem in fan-beam FBP image reconstructionJing Wang
Department of Radiology, State University of New York at Stony Brook, Stony Brook, New York 11794, USA
Med Phys 32:3389-94. 2005..Both theoretically predicted and empirically determined results concur and demonstrate the effectiveness of the presented alternative solution... - An experimental study on the noise properties of x-ray CT sinogram data in Radon spaceJing Wang
Department of Radiology, State University of New York, Stony Brook, NY 11794, USA
Phys Med Biol 53:3327-41. 2008..It is our intention that the statistical test and particularly the relationship between the first and second statistical moments will improve low-dose CT image reconstruction for screening applications... - Effects of phase aberration and noise on extended high frame rate imagingJing Wang
Ultrasound Laboratory, Department of Bioengineering, The University of Toledo, Toledo, OH 43606, USA
Ultrason Imaging 29:105-21. 2007..However, images reconstructed with the extended HFR imaging method have an overall higher quality than those with the D&S method given the phase aberration and noise models studied... - Relief texture from specularitiesJing Wang
Department of Electrical and Computer Engineering, Rutgers University, Piscataway, NJ 08854, USA
IEEE Trans Pattern Anal Mach Intell 28:446-57. 2006..Furthermore, spatially varying reflectance is measured simultaneously, i.e., both texture color and texture shape are retrieved... - Interval mapping of quantitative trait loci with selective DNA pooling dataJing Wang
Department of Animal Science and Center for Integrated Animal Genomics, Iowa State University, Ames, Iowa 50011, USA
Genet Sel Evol 39:685-709. 2007..With small family sizes, however, the LS-pool method resulted in severely biased estimates of QTL location for distal QTL but this bias was reduced with the ML-pool... - Four-dimensional image registration for image-guided radiotherapyEduard Schreibmann
Department of Radiation Oncology, Stanford University School of Medicine, Stanford, CA 94305 5847, USA
Int J Radiat Oncol Biol Phys 71:578-86. 2008..To use the 4D data acquired under different conditions or using different modalities, an algorithm for registering 4D images must be in place. We developed an automated 4D-4D registration method to take advantage of 4D information... - Gaining confidence in biological interpretation of the microarray data: the functional consistence of the significant GO categoriesDa Yang
Department of Bioinformatics, Bio pharmaceutical Key Laboratory of Heilongjiang Province Incubator of State Key Laboratory, Harbin Medical University, Harbin 150086, China
Bioinformatics 24:265-71. 2008.... - A spike detection method in EEG based on improved morphological filterGuanghua Xu
State Key Laboratory for Manufacturing Systems Engineering, Xi an Jiaotong University, Xi an 710049, PR China
Comput Biol Med 37:1647-52. 2007..We demonstrate that the average detection rate of the improved morphological filter is much higher than that of the other two methods, and there is no false detection for normal EEG signals with the proposed method... - Dose reduction for kilovotage cone-beam computed tomography in radiation therapyJing Wang
Department of Radiation Oncology, Stanford University School of Medicine, Clinical Cancer Center, 875 Blake Wilbur Drive, Rm CC G204, Stanford, CA 94305 5847, USA
Phys Med Biol 53:2897-909. 2008..Noise in the reconstructed CBCT image acquired with a low mAs protocol was greatly suppressed after the proposed sinogram domain image processing, without noticeable sacrifice of the spatial resolution... - Edge-based scoring and searching method for identifying condition-responsive protein-protein interaction sub-networkZheng Guo
Department of Bioinformatics, Bio pharmaceutical Key Laboratory of Heilongjiang Province Incubator of State Key Laboratory, Harbin Medical University, Harbin 150086, China
Bioinformatics 23:2121-8. 2007..Thus, the identification of condition-responsive PPI sub-networks is of great importance for investigating how a living cell adapts to changing environments... - Effect of pore former on the properties of casted film prepared from blends of Eudragit NE 30 D and Eudragit L 30 D-55Xiangrong Zhang
Department of Pharmaceutics, Shenyang Pharmaceutical University, Shenyang, P R China
Chem Pharm Bull (Tokyo) 55:1261-3. 2007..8 than in pH 5.0 and the concentration of pore former have a significant influence on the permeability to water vapour... - How many human genes can be defined as housekeeping with current expression data?Jiang Zhu
Key Laboratory of Genome Sciences and Information, Beijing Institute of Genomics, Chinese Academy of Sciences, Beijing, China
BMC Genomics 9:172. 2008..Although many studies have aimed at large-scale and thorough categorization of human HK genes, a meaningful consensus has yet to be reached... - Motion artifacts of extended high frame rate imagingJing Wang
Ultrasound Laboratory, Department of Bioengineering, The University of Toledo, Toledo, OH 43606, USA
IEEE Trans Ultrason Ferroelectr Freq Control 54:1303-15. 2007.... - Higher rates of t(11;18) in Chinese patients with transformed type of MALT lymphoma suggest novel pathways for progression of the diseaseXiaoyan Ke
Department of Hematology and Lymphoma Research Center, Peking University Third Hospital, Peking University Health Science Center, Beijing, People s Republic of China
Leuk Lymphoma 48:2157-66. 2007.... - MRI and hybrid PET/CT for monitoring tumour metastasis in a metastatic breast cancer model in rabbitLing Wang
Department of Vascular and Endocrine Surgery, Xijing Hospital, Fourth Military Medical University, Xi an, Shaanxi Province, China
Nucl Med Commun 29:137-43. 2008..To study tumour growth and metastasis in a rabbit metastatic breast cancer (MBC) model and find the most sensitive screening modality in monitoring tumour metastasis... - Adenosine stimulates the basolateral 50 pS K channels in the thick ascending limb of the rat kidneyRuimin Gu
Dept of Pharmacology, Harbin Medical University, Harbin 150086, China
Am J Physiol Renal Physiol 293:F299-305. 2007..We conclude that adenosine activates the 50 pS K channel in the basolateral membrane of the TAL and the stimulatory effect is mainly mediated by a PKA-dependent pathway via the A2 adenosine receptor in the TAL... - Globally predicting protein functions based on co-expressed protein-protein interaction networks and ontology taxonomy similaritiesMingzhu Zhu
Department of Bioinformatics, Harbin Medical University, Harbin, 150086, China
Gene 391:113-9. 2007.... - Enrichment analysis in high-throughput genomics - accounting for dependency in the NULLDavid L Gold
Department of Statistics, Texas A and M University, 3134 TAMU, College Statio, TX 77843 3143, USA
Brief Bioinform 8:71-7. 2007..In applications with publicly available data sets, our test results are similar to the conventional approach which assumes independence. We argue that the independence assumption is not detrimental... - Real-time three-dimensional echocardiography for quantifying left ventricular massHong wen Fei
Department of Diagnostic Ultrasound, Union Hospital, Tongji Medical College of Huazhong University of Science and Technology, Wuhan 430022
Chin Med Sci J 19:230-2. 2004..To test the accuracy of real-time three-dimensional echocardiography (RT3DE) imaging system for evaluating left ventricular mass (LVM) in phantom and excised canine heart... - A draft sequence for the genome of the domesticated silkworm (Bombyx mori)Qingyou Xia
Southwest Agricultural University, Chongqing Beibei, 400716, China
Science 306:1937-40. 2004..Our estimated gene count is 18,510, which exceeds the 13,379 genes reported for Drosophila melanogaster. Comparative analyses to fruitfly, mosquito, spider, and butterfly reveal both similarities and differences in gene content... - Applications of beta-mixture models in bioinformaticsYuan Ji
Department of Biostatistics, The University of Texas M.D. Anderson Cancer Center, Houston, 77030, USA
Bioinformatics 21:2118-22. 2005..SUPPLEMENTARY INFORMATION: http://odin.mdacc.tmc.edu/~yuanj/highcorgeneanno.html... - Adsorption and conformation of carboxymethyl cellulose at solid-liquid interfaces using spectroscopic, AFM and allied techniquesJing Wang
NSF Industry/University Cooperative Research Center for Advanced Studies in Novel Surfactants, Columbia University, New York, NY 10027, USA
J Colloid Interface Sci 291:75-83. 2005..All of the above results suggest that the main driving forces for CMC adsorption on talc are a combination of electrostatic interaction and hydrogen bonding rather than hydrophobic force... - Biological validation of differentially expressed genes in chronic lymphocytic leukemia identified by applying multiple statistical methods to oligonucleotide microarraysLynne V Abruzzo
Department of Hematopathology, The University of Texas M.D. Anderson Cancer Center, Houston, Texas 77030, USA
J Mol Diagn 7:337-45. 2005..A comprehensive list of all differentially expressed genes can only be obtained by combining the results of multiple statistical tests... - Inter-gene correlation on oligonucleotide arrays: how much does normalization matter?David L Gold
Department of Biostatistics and Applied Mathematics, M D Anderson Cancer Center, The University of Texas, Houston, Texas 77030 4009, USA
Am J Pharmacogenomics 5:271-9. 2005..The sensitivity of array results to normalization is an open question. No clear standard for comparing or judging normalization methods has yet emerged, and the effects of normalization on gene-to-gene co-expression are unclear... - ReAS: Recovery of ancestral sequences for transposable elements from the unassembled reads of a whole genome shotgunRuiqiang Li
James D. Watson Institute of Genome Sciences of Zhejiang University, Hangzhou, China
PLoS Comput Biol 1:e43. 2005..Tested on the japonica rice genome, ReAS was able to reconstruct all of the high copy sequences in the Repbase repository of known TEs, and increase the effectiveness of RepeatMasker in identifying TEs from genome sequences... - Paraneoplastic pemphigus associated with Castleman tumor: a commonly reported subtype of paraneoplastic pemphigus in ChinaJing Wang
Department of Dermatology, Peking University First Hospital, Beijing, China
Arch Dermatol 141:1285-93. 2005..Early detection and removal of the Castleman tumor are crucial for the treatment of this tumor-associated autoimmune disease... - Self-actuated, thermo-responsive hydrogel valves for lab on a chipJing Wang
Department of Mechanical Engineering and Applied Mechanics, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA
Biomed Microdevices 7:313-22. 2005..The hydrogel-based flow control is electronically addressable, does not require any moving parts, introduces minimal dead volume, is leakage and contaminant free, and is biocompatible... - RefSeq refinements of UniGene-based gene matching improve the correlation of expression measurements between two microarray platformsYuan Ji
Department of Biostatistics and Applied Mathematics, The University of Texas M.D. Anderson Cancer Center, Houston, Texas 77030-4009, USA
Appl Bioinformatics 5:89-98. 2006..It is a sensible approach for matching probes across platforms.We conclude that UniGene alone is insufficient to match genes across platforms. Refined matching based on RefSeq significantly improves the quality of matches... - Extract echo signal in HFR imaging systemHu Peng
Department of Electronic Science and Technology, University of Science and Technology of China, Hefei 230026, China
Ultrasonics 44:e89-91. 2006..With the new method we have developed, many other imaging methods, such as Doppler blood flow and elastic imaging, can be easily combined with HFR method to give more information of the imaged objects... - Comprehensive global energy minimum modeling of the sarin-serine adductJing Wang
Computational Center for Molecular Structure and Interactions, Department of Chemistry, Jackson State University, Jackson, Mississippi 39217, USA
J Phys Chem B 109:1006-14. 2005.... - PQN and DQN: algorithms for expression microarraysWei Min Liu
Roche Molecular Systems, Inc, 4300 Hacienda Drive, Pleasanton, CA 94588, USA
J Theor Biol 243:273-8. 2006..We found the computation for AUC of ROC at affycomp.biostat.jhsph.edu can be improved... - Examination of depth-weighted optical signals during cardiac optical mapping: a simulation studyZhenghong Xu
The Key Laboratory of Biomedical Information Engineering of Education Ministry, The School of Life Science and Technology, Xi an Jiaotong University, Xi an 710049, PR China
Comput Biol Med 37:732-8. 2007..Our results indicate that depth-weighted optical signals may infer cardiac activation dynamics, such as the mode and the direction of the propagation, the spatial distribution of depolarization or repolarization... - High frame rate imaging system for limited diffraction array beam imaging with square-wave aperture weightingsJian yu Lu
Ultrasound Laboratory, Department of Bioengineering, The University of Toledo, Toledo, OH 43606, USA
IEEE Trans Ultrason Ferroelectr Freq Control 53:1796-812. 2006.... - BGI-RIS: an integrated information resource and comparative analysis workbench for rice genomicsWenming Zhao
Beijing Genomics Institute (BGI, Chinese Academy of Sciences (CAS, Beijing Airport Industrial Zone-B6, Beijing 101300, China
Nucleic Acids Res 32:D377-82. 2004..Designed as a basic platform, BGI-RIS presents the sequenced genomes and related information in systematic and graphical ways for the convenience of in-depth comparative studies (http://rise.genomics.org.cn/)...