Research Topics
Genomes and GenesSpecies | Zhi Yong WangSummaryAffiliation: Stanford University Country: USA Publications
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Detail Information
Publications
Circadian rhythms of ethylene emission in ArabidopsisSimon C Thain
Unit Plant Hormone Signaling and Bio Imaging, Department of Molecular Genetics, University of Ghent, Belgium
Plant Physiol 136:3751-61. 2004..Mutants with altered ethylene production or signaling also retained normal rhythmicity of leaf movement. We conclude that circadian rhythms of ethylene production are not critical for rhythmic growth...- The brassinosteroid signal transduction pathwayZhi Yong Wang
Department of Plant Biology, Carnegie Institution, Stanford, CA 94305, USA
Cell Res 16:427-34. 2006..The BR signaling pathway has become a paradigm for both receptor kinase signaling in plants and steroid signaling by cell surface receptors in general... 
Brassinosteroid signal transduction--choices of signals and receptorsZhi Yong Wang
Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA 94305, USA
Trends Plant Sci 9:91-6. 2004..Recent studies demonstrated that tomato BRI1 (tBRI1) perceives both BR and the peptide hormone systemin, raising new questions about the molecular mechanism and evolution of receptor-ligand specificity...- BZR1 is a transcriptional repressor with dual roles in brassinosteroid homeostasis and growth responsesJun Xian He
Department of Plant Biology, Carnegie Institution, Stanford, CA 94305, USA
Science 307:1634-8. 2005.... - Integration of brassinosteroid signal transduction with the transcription network for plant growth regulation in ArabidopsisYu Sun
Department of Plant Biology, Carnegie Institution for Science, Stanford, CA 94305, USA
Dev Cell 19:765-77. 2010..Our results provide a genomic map of steroid hormone actions in plants that reveals a regulatory network that integrates hormonal and light-signaling pathways for plant growth regulation... - An essential role for 14-3-3 proteins in brassinosteroid signal transduction in ArabidopsisSrinivas S Gampala
Department of Plant Biology, Carnegie Institution, Stanford, CA 94305, USA
Dev Cell 13:177-89. 2007..This study demonstrates that multiple mechanisms are required for BR regulation of gene expression and plant growth... - The GSK3-like kinase BIN2 phosphorylates and destabilizes BZR1, a positive regulator of the brassinosteroid signaling pathway in ArabidopsisJun Xian He
Department of Plant Biology, Carnegie Institution of Washington, Stanford, CA 94305, USA
Proc Natl Acad Sci U S A 99:10185-90. 2002..These results strongly suggest that BIN2 phosphorylates BZR1 and targets it for degradation and that BR signaling causes BZR1 dephosphorylation and accumulation by inhibiting BIN2 activity... - Brassinosteroid signal transduction from cell-surface receptor kinases to nuclear transcription factorsTae Wuk Kim
Department of Plant Biology, Carnegie Institution for Science, Stanford, CA 94305, USA
Nat Cell Biol 11:1254-60. 2009..This study establishes a fully connected BR signalling pathway and provides new insights into the mechanism of GSK3 regulation... 
Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responsesEunkyoo Oh
Department of Plant Biology, Carnegie Institution for Science, Stanford, California 94305, USA
Nat Cell Biol 14:802-9. 2012..These results show that the BZR1-PIF4 interaction controls a core transcription network, enabling plant growth co-regulation by the steroid and environmental signals...- A proteomics study of brassinosteroid response in ArabidopsisZhiping Deng
Department of Plant Biology, Carnegie Institution of Washington, Stanford, California 94305, USA
Mol Cell Proteomics 6:2058-71. 2007..This study provides novel insights into the molecular networks that link BR signaling to specific cellular and physiological responses... - Genome-wide identification of transcription factor-binding sites in plants using chromatin immunoprecipitation followed by microarray (ChIP-chip) or sequencing (ChIP-seq)Jia Ying Zhu
Department of Plant Biology, Carnegie Institution for Science, Stanford, CA, USA
Methods Mol Biol 876:173-88. 2012..We have used these protocols to successfully identify direct target genes of the BZR1 TF of the brassinosteroid signaling pathway in both Arabidopsis and rice... - Proteomics studies of brassinosteroid signal transduction using prefractionation and two-dimensional DIGEWenqiang Tang
Department of Plant Biology, Carnegie Institution of Washington, Stanford, California 94305, USA
Mol Cell Proteomics 7:728-38. 2008..Our study demonstrates that prefractionation coupled with 2-D DIGE is a powerful approach for studying signal transduction... - Brassinosteroid regulates stomatal development by GSK3-mediated inhibition of a MAPK pathwayTae Wuk Kim
Department of Plant Biology, Carnegie Institution for Science, Stanford, California 94305 4150, USA
Nature 482:419-22. 2012.... - The CDG1 kinase mediates brassinosteroid signal transduction from BRI1 receptor kinase to BSU1 phosphatase and GSK3-like kinase BIN2Tae Wuk Kim
Department of Plant Biology, Carnegie Institution for Science, Stanford, CA 94305, USA
Mol Cell 43:561-71. 2011..This study thus demonstrates a complete phosphorylation/dephosphorylation cascade linking a steroid-activated receptor kinase to a GSK3-like kinase in plants... - Chemical genetic dissection of brassinosteroid-ethylene interactionJoshua M Gendron
Department of Biological Sciences, Stanford University, Stanford, CA 94305, USA
Mol Plant 1:368-79. 2008..The BRP-related compounds can be useful tools for manipulating plant growth and studying hormone interactions... - Brassinosteroid, gibberellin and phytochrome impinge on a common transcription module in ArabidopsisMing Yi Bai
Department of Plant Biology, Carnegie Institution for Science, Stanford, California 94305, USA
Nat Cell Biol 14:810-7. 2012..The results demonstrate that GA releases DELLA-mediated inhibition of BZR1, and that the DELLA-BZR1-PIF4 interaction defines a core transcription module that mediates coordinated growth regulation by GA, BR and light signals... - Multiple mechanisms modulate brassinosteroid signalingJoshua M Gendron
Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA 94305, USA
Curr Opin Plant Biol 10:436-41. 2007..In addition, BRI1 signaling from the endosomes and BR-independent functions of BAK1 have been observed. However, a major gap still exists in the current BR signaling pathway between the receptor complex and downstream signaling events... - Brassinosteroid signal transduction from receptor kinases to transcription factorsTae Wuk Kim
Department of Plant Biology, Carnegie Institution for Science, Stanford, California 94305, USA
Annu Rev Plant Biol 61:681-704. 2010..Thus, the BR signaling pathway provides a paradigm for understanding receptor kinase-mediated signal transduction as well as tools for the genetic improvement of the productivity of crop plants... - Quantitative analysis of protein phosphorylation using two-dimensional difference gel electrophoresisZhiping Deng
Department of Plant Biology, Carnegie Institution for Science, Stanford, CA, USA
Methods Mol Biol 876:47-66. 2012..For IP-DIGE, proteins of interest can be immunopurified and then analyzed by 2-D DIGE to confirm changes of posttranslational modifications that alter the charge or size of the proteins... - Brassinosteroid signaling network and regulation of photomorphogenesisZhi Yong Wang
Department of Plant Biology, Carnegie Institution for Science, Stanford, California 94305, USA
Annu Rev Genet 46:701-24. 2012..The molecular connections in the BR signaling network demonstrate a robust steroid signaling system that has evolved in plants to orchestrate signal transduction, genome expression, metabolism, defense, and development... - Brassinosteroids regulate organ boundary formation in the shoot apical meristem of ArabidopsisJoshua M Gendron
Department of Plant Biology, Carnegie Institution for Science, Stanford, CA 94305, USA
Proc Natl Acad Sci U S A 109:21152-7. 2012..Activation of BR signaling represses CUC gene expression and causes organ fusion phenotypes. This study uncovers a role for BR in the spatiotemporal control of organ boundary formation and morphogenesis in the SAM... - Prefoldin 6 is required for normal microtubule dynamics and organization in ArabidopsisYing Gu
Department of Plant Biology, Carnegie Institution for Science, 260 Panama Street, Stanford, CA 94305, USA
Proc Natl Acad Sci U S A 105:18064-9. 2008..These results support the concept that the function of microtubules is critically dependent on the absolute amount of tubulins... - BSKs mediate signal transduction from the receptor kinase BRI1 in ArabidopsisWenqiang Tang
Department of Plant Biology, Carnegie Institution of Washington, Stanford, CA 94305, USA
Science 321:557-60. 2008..These results demonstrate that BSKs are the substrates of BRI1 kinase that activate downstream BR signal transduction... - Brassinosteroid action in flowering plants: a Darwinian perspectiveUlrich Kutschera
Department of Plant Biology, Carnegie Institution for Science, Stanford, California 94305, USA
J Exp Bot 63:3511-22. 2012.... - Identification of O-linked β-D-N-acetylglucosamine-modified proteins from ArabidopsisShou Ling Xu
Department of Plant Biology, Carnegie Institution for Science, Stanford, CA, USA
Methods Mol Biol 876:33-45. 2012..Here we describe the use of lectin affinity chromatography combined with electron transfer dissociation mass spectrometry to enrich and to detect O-GlcNAc modified peptides from Arabidopsis... - Functions of OsBZR1 and 14-3-3 proteins in brassinosteroid signaling in riceMing Yi Bai
Key Laboratory of Photosynthesis and Environmental Molecular Biology, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China
Proc Natl Acad Sci U S A 104:13839-44. 2007..These results demonstrate a conserved function of OsBZR1 and an important role of 14-3-3 proteins in brassinosteroid signal transduction in rice... - Constitutive expression of CIR1 (RVE2) affects several circadian-regulated processes and seed germination in ArabidopsisXiangbo Zhang
National Laboratory for Protein Engineering and Plant Genetic Engineering, Peking Yale Joint Research Center for Plant Molecular Genetics and AgroBiotechnology, College of Life Sciences, Peking University, Beijing 100871, China
Plant J 51:512-25. 2007..These results suggest that CIR1 is possibly part of a regulatory feedback loop that controls a subset of the circadian outputs and modulates the central oscillator... - Circadian rhythms confer a higher level of fitness to Arabidopsis plantsRachel M Green
Department of Molecular, Cell and Developmental Biology, P.O. Box 160606, University of California-Los Angeles, Los Angeles, CA 90095-1606, USA
Plant Physiol 129:576-84. 2002..In addition, we demonstrate that two other circadian rhythm mutants, LHY-ox and elf3, have low-viability phenotypes. Our findings demonstrate the adaptive advantage of circadian rhythms in Arabidopsis...