S S Jeffrey
Affiliation: Stanford University
- Cancer biomarker profiling with microRNAsStefanie S Jeffrey
Nat Biotechnol 26:400-1. 2008
- TP53 mutation status and gene expression profiles are powerful prognostic markers of breast cancerAnita Langerød
Department of Genetics, Institute for Cancer Research, Rikshospitalet Radiumhospitalet Medical Center, Oslo, Norway N 0310
Breast Cancer Res 9:R30. 2007....
- RNA extraction from ten year old formalin-fixed paraffin-embedded breast cancer samples: a comparison of column purification and magnetic bead-based technologiesAlfredo Ribeiro-Silva
Department of Surgery, Stanford University School of Medicine, MSLS Bldg Room P214 1201 Welch Road, Stanford, CA 94305 5494, USA
BMC Mol Biol 8:118. 2007....
- A molecular 'signature' of primary breast cancer cultures; patterns resembling tumor tissueShanaz H Dairkee
California Pacific Medical Center, San Francisco, CA 94115 1932, USA
BMC Genomics 5:47. 2004..To identify the spectrum of malignant attributes maintained outside the host environment, we have compared global gene expression in primary breast tumors and matched short-term epithelial cultures...
- Discovery and validation of breast cancer subtypesAmy V Kapp
Department of Statistics, Stanford University, Stanford, CA, USA
BMC Genomics 7:231. 2006..The most recent study presented evidence for the existence of five different subtypes: normal breast-like, basal, luminal A, luminal B, and ERBB2+...
- New models and online calculator for predicting non-sentinel lymph node status in sentinel lymph node positive breast cancer patientsHolbrook E Kohrt
Department of Surgery, Stanford University School of Medicine, Stanford, CA, USA
BMC Cancer 8:66. 2008..Our goal was to develop new models to quantify the risk of NSLN metastasis in SLN-positive patients and to compare predictive capabilities to another widely used model...
- The diagnosis and management of pre-invasive breast disease: promise of new technologies in understanding pre-invasive breast lesionsStefanie S Jeffrey
Stanford University School of Medicine, Stanford, California, USA
Breast Cancer Res 5:320-8. 2003..It is expected that molecular technologies will identify breast tissue at risk for the development of unfavorable subtypes of invasive breast cancer and reveal strategies for targeted chemoprevention or eradication...
- Genomics-based prognosis and therapeutic prediction in breast cancerStefanie S Jeffrey
Department of Surgery, Stanford University School of Medicine, Stanford, California, 94305 5494, USA
J Natl Compr Canc Netw 3:291-300. 2005..We believe that the characterization and discernment of different systems among breast cancers is crucial for understanding drug sensitivity and resistance mechanisms and for guiding therapy...
- Expression array technology in the diagnosis and treatment of breast cancerStefanie S Jeffrey
Department of Surgery, Stanford University School of Medicine, Stanford, CA 94305, USA
Mol Interv 2:101-9. 2002..Thus, microarray analysis may translate basic research data into more confident diagnoses, specifically designed treatment regimens geared to each patient's needs, and better clinical prognoses...
- Controversies in sentinel lymph node biopsy for breast cancerS S Jeffrey
Division of Surgical Oncology, Stanford University School of Medicine, California, USA
Cancer Biother Radiopharm 15:223-33. 2000..This paper will address some of the controversial areas of sentinel lymph node biopsy and offer an option for physicians who want to develop a sentinel lymph node program in their hospital...
- Radiofrequency ablation of breast cancer: first report of an emerging technologyS S Jeffrey
Department of Surgery, Stanford University School of Medicine, Calif, USA
Arch Surg 134:1064-8. 1999..Radiofrequency (RF) energy applied to breast cancers will result in cancer cell death...
- Freehand iMRI-guided large-gauge core needle biopsy: a new minimally invasive technique for diagnosis of enhancing breast lesionsB L Daniel
Department of Radiology, Stanford University, Stanford, California 94305, USA
J Magn Reson Imaging 13:896-902. 2001..J. Magn. Reson. Imaging 2001;13:896-902...
- Predictors of reexcision findings and recurrence after breast conservationMelanie C Smitt
Department of Radiation Oncology, Stanford University, Stanford, CA, USA
Int J Radiat Oncol Biol Phys 57:979-85. 2003..To identify predictors of reexcision findings and local recurrence in the setting of breast-conserving therapy with radiation...
- Microarray analysis reveals a major direct role of DNA copy number alteration in the transcriptional program of human breast tumorsJonathan R Pollack
Departments of Pathology, Genetics, Surgery, Health Research and Policy, and Biochemistry, and Howard Hughes Medical Institute, Stanford University School of Medicine, Stanford, CA 94305, USA
Proc Natl Acad Sci U S A 99:12963-8. 2002..These findings provide evidence that widespread DNA copy number alteration can lead directly to global deregulation of gene expression, which may contribute to the development or progression of cancer...
- Cell trapping in activated micropores for functional analysisAmirAli H Talasaz
Electr Eng Dept, Stanford Univ, CA 94305, USA
Conf Proc IEEE Eng Med Biol Soc 1:1838-41. 2006..In the process, single cells are precisely positioned and captured in activated micropores. To show the performance of the proposed device, cultured yeast cells and human epithelial circulating tumor cells are successfully captured...
- The evolution of accelerated, partial breast irradiation as a potential treatment option for women with newly diagnosed breast cancer considering breast conservationFrederick M Dirbas
Division of General Surgery, Department of Surgery, Stanford University School of Medicine, Stanford, CA 94305, USA
Cancer Biother Radiopharm 19:673-705. 2004....
- Focal amplification and oncogene dependency of GAB2 in breast cancerM Bocanegra
Department of Pathology, Stanford University, Stanford, CA 94305 5176, USA
Oncogene 29:774-9. 2010..Our studies implicate focal amplification of GAB2 in breast carcinogenesis, and underscore an oncogenic role of scaffolding adapter proteins, and a potential new point of therapeutic intervention...
- Transcriptomic signatures in breast cancerJianjiang Fu
Stanford University Medical Center, Stanford, CA 94305 5494, USA
Mol Biosyst 3:466-72. 2007..Newer bioinformatic approaches are being developed to assist with the analysis of this important data...
- Disease-specific genomic analysis: identifying the signature of pathologic biologyMonica Nicolau
Department of Surgery, Stanford University School of Medicine, Stanford University, Stanford, CA, USA
Bioinformatics 23:957-65. 2007..We also identify new markers distinguishing ductal and lobular breast cancers. Although our examples focus on microarrays, DSGA generalizes to any high dimensional genomic/proteomic data...
- Different gene expression patterns in invasive lobular and ductal carcinomas of the breastHongjuan Zhao
Department of Surgery, Stanford University School of Medicine, Stanford, California 94305, USA
Mol Biol Cell 15:2523-36. 2004..The remaining ILCs closely resemble IDCs in their transcription patterns. Further studies are needed to explore the differences between ILC molecular subtypes and to determine whether they require different therapeutic strategies...
- Management of breast cancer after Hodgkin's diseaseS L Wolden
Departments of Radiation Oncology, Medicine, and Surgery, Stanford University Medical Center, Stanford, CA, USA
J Clin Oncol 18:765-72. 2000..To evaluate the incidence, detection, pathology, management, and prognosis of breast cancer occurring after Hodgkin's disease...
- Breast cancer: variables affecting sentinel lymph node visualization at preoperative lymphoscintigraphyR L Birdwell
Department of Radiology, Stanford University Medical Center, 300 Pasteur Dr, H 1307, Stanford, CA 94305 5105, USA
Radiology 220:47-53. 2001....
- Rates of reexcision for breast cancer after magnetic resonance imaging-guided bracket wire localizationAnne Marie Wallace
Department of Surgery, Stanford University School of Medicine, Stanford, CA, USA
J Am Coll Surg 200:527-37. 2005..Reexcision was often because of DCIS and was the only pathology found at reexcision, perhaps because MRI is more sensitive for detecting invasive carcinoma than DCIS...
- Estrogen receptor-negative invasive breast cancer: imaging features of tumors with and without human epidermal growth factor receptor type 2 overexpressionYingbing Wang
Department of Surgery, Stanford University School of Medicine, Stanford, CA 94305 5494, USA
Radiology 246:367-75. 2008....
- Magnetic resonance imaging of suspicious breast masses seen on one mammographic viewRegina S Offodile
Department of Surgery, Stanford University School of Medicine, CA, USA
Breast J 10:416-22. 2004..Breast MRI has the advantage of imaging the entire breast and is particularly useful for these lesions. In this series, MRI prevented delay in breast cancer diagnosis...
- Locally advanced breast cancer: is surgery necessary?A M Favret
Department of Medicine, Stanford University Medical Center, Stanford, California 94305 5115, USA
Breast J 7:131-7. 2001..5%. These data indicate that the routine inclusion of breast surgery in a combined modality treatment program for LABC does not appear necessary for the majority of patients who experience a response to induction chemotherapy...
- MRI-guided needle localization of suspicious breast lesions: results of a freehand techniqueM A A J van den Bosch
Department of Radiology, Stanford University Medical Center, Stanford, CA 94305-5105, USA
Eur Radiol 16:1811-7. 2006..7%) lesions were missed by surgical biopsy. MRI-guided freehand needle localization is accurate and allows localization of lesions anterior in the breast, the axillary region, and near the chest wall...
- Lysyl oxidase is essential for hypoxia-induced metastasisJanine T Erler
Department of Radiation Oncology, Stanford University School of Medicine, Stanford, California 94305, USA
Nature 440:1222-6. 2006..Furthermore, LOX may be required to create a niche permissive for metastatic growth. Our findings indicate that LOX is essential for hypoxia-induced metastasis and is a good therapeutic target for preventing and treating metastases...
- Isolating highly enriched populations of circulating epithelial cells and other rare cells from blood using a magnetic sweeper deviceAmirAli H Talasaz
Department of Electrical Engineering, Stanford University, Stanford, CA 94305, USA
Proc Natl Acad Sci U S A 106:3970-5. 2009..In contrast, we could not find any circulating epithelial cells in samples from 5 healthy donors. The isolated CEpCs are all stored individually for further molecular analysis...
- Distribution of persistent, lipid-soluble chemicals in breast and abdominal adipose tissues: lessons learned from a breast cancer studyMyrto Petreas
Hazardous Materials Laboratory, California Department of Toxic Substances Control, Berkeley, CA, USA
Cancer Epidemiol Biomarkers Prev 13:416-24. 2004....
- A streamlined platform for high-content functional proteomics of primary human specimensNadim Jessani
The Skaggs Institute for Chemical Biology and Department of Cell Biology, The Scripps Research Institute, 10550 N. Torrey Pines Rd, La Jolla, California 92037, USA
Nat Methods 2:691-7. 2005....
- DNA copy number alterations and expression of relevant genes in triple-negative breast cancerWonshik Han
Department of Surgery, Seoul National University College of Medicine, Chongno Gu, Seoul 110 744, Korea
Genes Chromosomes Cancer 47:490-9. 2008..This article contains Supplementary Material available at http://www.interscience.wiley.com/jpages/1045-2257/suppmat...
- MR imaging features of infiltrating lobular carcinoma of the breast: histopathologic correlationAliya Qayyum
Department of Radiology, University of California San Francisco, San Francisco, CA 94143-0628, USA
AJR Am J Roentgenol 178:1227-32. 2002..The appearance of multiple lesions or of enhancing fibroglandular breast elements on MR imaging is suggestive of infiltrating lobular carcinoma...
- Radiation-induced effects on gene expression: an in vivo study on breast cancerAslaug Helland
Department of Genetics, Institute for Cancer Research, Rikshospitalet Radiumhospitalet Medical Center, Oslo, Norway
Radiother Oncol 80:230-5. 2006..The purpose of this study was to investigate the molecular basis underlying response to radiotherapy in breast cancer tissue...
- MRI features of mucosa-associated lymphoid tissue lymphoma in the breastLeandro A Espinosa
Department of Radiology, University of Michigan, Ann Arbor, MI, USA
AJR Am J Roentgenol 185:199-202. 2005
- Adipose levels of dioxins and risk of breast cancerPeggy Reynolds
California Department of Health Services, Environmental Health Investigations Branch, 1515 Clay Street, Suite 1700, Oakland, CA 94612, USA
Cancer Causes Control 16:525-35. 2005..Our objective was to evaluate the breast cancer risk associated with body burden levels of polychlorinated dibenzo-p-dioxins (PCDDs) and polychlorinated dibenzofurans (PCDFs)...