Richard W Hyman

Summary

Affiliation: Stanford University
Country: USA

Publications

  1. pmc Molecular probe technology detects bacteria without culture
    Richard W Hyman
    Departments of Biochemistry, Stanford University, Stanford, CA, USA
    BMC Microbiol 12:29. 2012
  2. pmc A direct comparison of the KB™ Basecaller and phred for identifying the bases from DNA sequencing using chain termination chemistry
    Richard W Hyman
    Stanford Genome Technology Centre, 855 S, California St, Palo Alto, CA 94304, USA
    BMC Res Notes 3:257. 2010
  3. pmc Microbes on the human vaginal epithelium
    Richard W Hyman
    Stanford Genome Technology Center and Departments of Biochemistry, Genetics, and Obstetrics and Gynecology, Stanford University, 855 California Avenue, Palo Alto, CA 94304, USA
    Proc Natl Acad Sci U S A 102:7952-7. 2005
  4. pmc Multiplex identification of microbes
    Richard W Hyman
    Department of Biochemistry, Stanford Genome Technology Center, Stanford University Medical School, 855 California Avenue, Palo Alto, California 94304, USA
    Appl Environ Microbiol 76:3904-10. 2010
  5. pmc Diversity of the vaginal microbiome correlates with preterm birth
    Richard W Hyman
    1Stanford Genome Technology Center, Stanford University, Palo Alto, CA, USA
    Reprod Sci 21:32-40. 2014
  6. ncbi request reprint Targeted and highly multiplexed detection of microorganisms by employing an ensemble of molecular probes
    Weihong Xu
    Stanford Genome Technology Center, Palo Alto, California, USA
    Appl Environ Microbiol 80:4153-61. 2014
  7. pmc The dynamics of the vaginal microbiome during infertility therapy with in vitro fertilization-embryo transfer
    Richard W Hyman
    Department of Biochemistry, Stanford University, Stanford, CA, USA
    J Assist Reprod Genet 29:105-15. 2012
  8. ncbi request reprint Sequence of Plasmodium falciparum chromosome 12
    Richard W Hyman
    Stanford Genome Technology Center, 855 California Avenue, Palo Alto, California 94304, USA
    Nature 419:534-7. 2002
  9. pmc Genome sequence of the human malaria parasite Plasmodium falciparum
    Malcolm J Gardner
    The Institute for Genomic Research, 9712 Medical Center Drive, Rockville, Maryland 20850, USA
    Nature 419:498-511. 2002
  10. pmc The genome of the basidiomycetous yeast and human pathogen Cryptococcus neoformans
    Brendan J Loftus
    Institute for Genomic Research, 9712 Medical Center Drive, Rockville, MD 20850, USA
    Science 307:1321-4. 2005

Detail Information

Publications10

  1. pmc Molecular probe technology detects bacteria without culture
    Richard W Hyman
    Departments of Biochemistry, Stanford University, Stanford, CA, USA
    BMC Microbiol 12:29. 2012
    ..In this communication, we report the first results of employing our molecular probes to detect bacteria in clinical samples...
  2. pmc A direct comparison of the KB™ Basecaller and phred for identifying the bases from DNA sequencing using chain termination chemistry
    Richard W Hyman
    Stanford Genome Technology Centre, 855 S, California St, Palo Alto, CA 94304, USA
    BMC Res Notes 3:257. 2010
    ..Relatively recently, the software KB™ Basecaller has replaced phred for identifying the bases from raw sequence data in DNA sequencing employing dideoxy chemistry. We have measured quantitatively the consequences of that change...
  3. pmc Microbes on the human vaginal epithelium
    Richard W Hyman
    Stanford Genome Technology Center and Departments of Biochemistry, Genetics, and Obstetrics and Gynecology, Stanford University, 855 California Avenue, Palo Alto, CA 94304, USA
    Proc Natl Acad Sci U S A 102:7952-7. 2005
    ..Eight subjects presented complex mixtures of Lactobacillus and other microbes. The remaining eight subjects had no Lactobacillus. Instead, Bifidobacterium, Gardnerella, Prevotella, Pseudomonas, or Streptococcus predominated...
  4. pmc Multiplex identification of microbes
    Richard W Hyman
    Department of Biochemistry, Stanford Genome Technology Center, Stanford University Medical School, 855 California Avenue, Palo Alto, California 94304, USA
    Appl Environ Microbiol 76:3904-10. 2010
    ..While these particular molecular probes are aimed at our interest in the microbes in the human vagina, this molecular probe method could be employed to identify the microbes in any ecological niche...
  5. pmc Diversity of the vaginal microbiome correlates with preterm birth
    Richard W Hyman
    1Stanford Genome Technology Center, Stanford University, Palo Alto, CA, USA
    Reprod Sci 21:32-40. 2014
    ..We conclude that uncultured vaginal bacteria play an important role in PTB and race/ethnicity and sampling location are important determinants of the vaginal microbiome. ..
  6. ncbi request reprint Targeted and highly multiplexed detection of microorganisms by employing an ensemble of molecular probes
    Weihong Xu
    Stanford Genome Technology Center, Palo Alto, California, USA
    Appl Environ Microbiol 80:4153-61. 2014
    ..In addition, we employed molecular probes to identify the bacteria from vaginal swabs and demonstrate how a deliberate selection of molecular probes can identify less abundant bacteria even in the presence of much more abundant species. ..
  7. pmc The dynamics of the vaginal microbiome during infertility therapy with in vitro fertilization-embryo transfer
    Richard W Hyman
    Department of Biochemistry, Stanford University, Stanford, CA, USA
    J Assist Reprod Genet 29:105-15. 2012
    ..To determine the vaginal microbiome in women undergoing IVF-ET and investigate correlations with clinical outcomes...
  8. ncbi request reprint Sequence of Plasmodium falciparum chromosome 12
    Richard W Hyman
    Stanford Genome Technology Center, 855 California Avenue, Palo Alto, California 94304, USA
    Nature 419:534-7. 2002
    ..We discuss the methodology that yielded a finished and fully contiguous sequence for chromosome 12. The biological implications of the sequence data are more thoroughly discussed in an accompanying Article (ref. 3)...
  9. pmc Genome sequence of the human malaria parasite Plasmodium falciparum
    Malcolm J Gardner
    The Institute for Genomic Research, 9712 Medical Center Drive, Rockville, Maryland 20850, USA
    Nature 419:498-511. 2002
    ..The genome sequence provides the foundation for future studies of this organism, and is being exploited in the search for new drugs and vaccines to fight malaria...
  10. pmc The genome of the basidiomycetous yeast and human pathogen Cryptococcus neoformans
    Brendan J Loftus
    Institute for Genomic Research, 9712 Medical Center Drive, Rockville, MD 20850, USA
    Science 307:1321-4. 2005
    ..neoformans encodes unique genes that may contribute to its unusual virulence properties, and comparison of two phenotypically distinct strains reveals variation in gene content in addition to sequence polymorphisms between the genomes...