Arthur R Grossman

Summary

Affiliation: Stanford University
Country: USA

Publications

  1. pmc Phylogenomic analysis of the Chlamydomonas genome unmasks proteins potentially involved in photosynthetic function and regulation
    Arthur R Grossman
    Department of Plant Biology, Carnegie Institution for Science, 260 Panama Street, Stanford, CA 94305, USA
    Photosynth Res 106:3-17. 2010
  2. ncbi request reprint Chlamydomonas reinhardtii in the landscape of pigments
    Arthur R Grossman
    The Carnegie Institution of Washington, Department of Plant Biology, Stanford, California 94305, USA
    Annu Rev Genet 38:119-73. 2004
  3. pmc Paths toward algal genomics
    Arthur R Grossman
    The Carnegie Institution, Department of Plant Biology, Stanford, California 94305, USA
    Plant Physiol 137:410-27. 2005
  4. ncbi request reprint Multiple facets of anoxic metabolism and hydrogen production in the unicellular green alga Chlamydomonas reinhardtii
    Arthur R Grossman
    Department of Plant Biology, Carnegie Institution for Science, Stanford, CA 94305, USA
    New Phytol 190:279-88. 2011
  5. ncbi request reprint Novel metabolism in Chlamydomonas through the lens of genomics
    Arthur R Grossman
    Department of Plant Biology, The Carnegie Institution, 260 Panama Street, Stanford, California 94305, USA
    Curr Opin Plant Biol 10:190-8. 2007
  6. ncbi request reprint In the grip of algal genomics
    Arthur R Grossman
    The Carnegie Institution, Department of Plant Biology, 260 Panama Street, Stanford, CA 94305, USA
    Adv Exp Med Biol 616:54-76. 2007
  7. doi request reprint Regulation of nif gene expression and the energetics of N2 fixation over the diel cycle in a hot spring microbial mat
    Anne Soisig Steunou
    Department of Plant Biology, The Carnegie Institution, Stanford University, Stanford, CA, USA
    ISME J 2:364-78. 2008
  8. pmc Altered fermentative metabolism in Chlamydomonas reinhardtii mutants lacking pyruvate formate lyase and both pyruvate formate lyase and alcohol dehydrogenase
    Claudia Catalanotti
    Department of Plant Biology, Carnegie Institution for Science, Stanford, California 94305, USA
    Plant Cell 24:692-707. 2012
  9. pmc Novel thylakoid membrane GreenCut protein CPLD38 impacts accumulation of the cytochrome b6f complex and associated regulatory processes
    Mark L Heinnickel
    Department of Plant Biology, Carnegie Institute for Science, Stanford, California 94305, USA
    J Biol Chem 288:7024-36. 2013
  10. pmc Genome-based approaches to understanding phosphorus deprivation responses and PSR1 control in Chlamydomonas reinhardtii
    Jeffrey L Moseley
    Carnegie Institution, Department of Plant Biology, 260 Panama Street, Stanford, California 94305, USA
    Eukaryot Cell 5:26-44. 2006

Detail Information

Publications55

  1. pmc Phylogenomic analysis of the Chlamydomonas genome unmasks proteins potentially involved in photosynthetic function and regulation
    Arthur R Grossman
    Department of Plant Biology, Carnegie Institution for Science, 260 Panama Street, Stanford, CA 94305, USA
    Photosynth Res 106:3-17. 2010
    ....
  2. ncbi request reprint Chlamydomonas reinhardtii in the landscape of pigments
    Arthur R Grossman
    The Carnegie Institution of Washington, Department of Plant Biology, Stanford, California 94305, USA
    Annu Rev Genet 38:119-73. 2004
    ..These areas of research have become especially attractive for intensive development with the application of potent molecular and genomic tools currently being applied to studies of C. reinhardtii...
  3. pmc Paths toward algal genomics
    Arthur R Grossman
    The Carnegie Institution, Department of Plant Biology, Stanford, California 94305, USA
    Plant Physiol 137:410-27. 2005
  4. ncbi request reprint Multiple facets of anoxic metabolism and hydrogen production in the unicellular green alga Chlamydomonas reinhardtii
    Arthur R Grossman
    Department of Plant Biology, Carnegie Institution for Science, Stanford, CA 94305, USA
    New Phytol 190:279-88. 2011
    ....
  5. ncbi request reprint Novel metabolism in Chlamydomonas through the lens of genomics
    Arthur R Grossman
    Department of Plant Biology, The Carnegie Institution, 260 Panama Street, Stanford, California 94305, USA
    Curr Opin Plant Biol 10:190-8. 2007
    ....
  6. ncbi request reprint In the grip of algal genomics
    Arthur R Grossman
    The Carnegie Institution, Department of Plant Biology, 260 Panama Street, Stanford, CA 94305, USA
    Adv Exp Med Biol 616:54-76. 2007
    ....
  7. doi request reprint Regulation of nif gene expression and the energetics of N2 fixation over the diel cycle in a hot spring microbial mat
    Anne Soisig Steunou
    Department of Plant Biology, The Carnegie Institution, Stanford University, Stanford, CA, USA
    ISME J 2:364-78. 2008
    ..These results are discussed with respect to the energetics and regulation of N2 fixation in hot spring mats and factors that can markedly influence the extent of N2 fixation over the diel cycle...
  8. pmc Altered fermentative metabolism in Chlamydomonas reinhardtii mutants lacking pyruvate formate lyase and both pyruvate formate lyase and alcohol dehydrogenase
    Claudia Catalanotti
    Department of Plant Biology, Carnegie Institution for Science, Stanford, California 94305, USA
    Plant Cell 24:692-707. 2012
    ....
  9. pmc Novel thylakoid membrane GreenCut protein CPLD38 impacts accumulation of the cytochrome b6f complex and associated regulatory processes
    Mark L Heinnickel
    Department of Plant Biology, Carnegie Institute for Science, Stanford, California 94305, USA
    J Biol Chem 288:7024-36. 2013
    ..Together, these findings support the hypothesis that CPLD38 impacts the stability of the cytochrome b6f complex and possibly plays a role in balancing redox inputs to the quinone pool from photosynthesis and chlororespiration...
  10. pmc Genome-based approaches to understanding phosphorus deprivation responses and PSR1 control in Chlamydomonas reinhardtii
    Jeffrey L Moseley
    Carnegie Institution, Department of Plant Biology, 260 Panama Street, Stanford, California 94305, USA
    Eukaryot Cell 5:26-44. 2006
    ....
  11. pmc A mutant in the ADH1 gene of Chlamydomonas reinhardtii elicits metabolic restructuring during anaerobiosis
    Leonardo Magneschi
    Department of Plant Biology, Carnegie Institution for Science, Stanford, California 94305, USA
    Plant Physiol 158:1293-305. 2012
    ....
  12. ncbi request reprint Anaerobic acclimation in Chlamydomonas reinhardtii: anoxic gene expression, hydrogenase induction, and metabolic pathways
    Florence Mus
    Department of Plant Biology, Carnegie Institution, Stanford, California 94305, USA
    J Biol Chem 282:25475-86. 2007
    ....
  13. pmc Phosphorus deprivation responses and phosphonate utilization in a thermophilic Synechococcus sp. from microbial mats
    Melissa M Adams
    Carnegie Institution for Science, Department of Plant Biology, Stanford University, Stanford, CA 94305, USA
    J Bacteriol 190:8171-84. 2008
    ..Once acclimated, the cells grew rapidly in fresh medium with methylphosphonate as the only source of phosphorus. The possible implications of these results are discussed with respect to the ecophysiology of the microbial mats...
  14. pmc Genetic interactions between regulators of Chlamydomonas phosphorus and sulfur deprivation responses
    Jeffrey L Moseley
    Department of Plant Biology, Carnegie Institution for Science, Stanford, California 94305, USA
    Genetics 181:889-905. 2009
    ..Overall, the work strongly suggests integration of the different circuits that control nutrient-deprivation responses in Chlamydomonas...
  15. pmc Tiered regulation of sulfur deprivation responses in Chlamydomonas reinhardtii and identification of an associated regulatory factor
    Munevver Aksoy
    Department of Plant Biology, Carnegie Institution for Science, Stanford, California 94305, USA
    Plant Physiol 162:195-211. 2013
    ..Analysis of the ars73a strain has helped us generate a model that incorporates a number of complexities associated with S deprivation responses in C. reinhardtii...
  16. ncbi request reprint Phototropin involvement in the expression of genes encoding chlorophyll and carotenoid biosynthesis enzymes and LHC apoproteins in Chlamydomonas reinhardtii
    Chung Soon Im
    Department of Plant Biology, Carnegie Institution, Stanford, CA 94306, USA
    Plant J 48:1-16. 2006
    ....
  17. pmc Identification and regulation of plasma membrane sulfate transporters in Chlamydomonas
    Wirulda Pootakham
    Department of Biology, Stanford University, Stanford, California 94305 5020, USA
    Plant Physiol 153:1653-68. 2010
    ..Finally, mutants identified for each of the S-deprivation-responsive transporters were used to establish their critical role in the transport of SO(4)(2-) into S-deprived cells...
  18. pmc Binding of cysteine synthase to the STAS domain of sulfate transporter and its regulatory consequences
    Nakako Shibagaki
    Department of Plant Biology, The Carnegie Institution for Science, Stanford, California 94305, USA
    J Biol Chem 285:25094-102. 2010
    ..These observations suggest a regulatory model in which interactions between SULTR1;2 and OASTL coordinate internalization of SO(4)(2-) with the energetic/metabolic state of plant root cells...
  19. ncbi request reprint Generation of an oligonucleotide array for analysis of gene expression in Chlamydomonas reinhardtii
    Stephan Eberhard
    Department of Plant Biology, The Carnegie Institution, 260 Panama Street, Stanford, CA, 94305, USA
    Curr Genet 49:106-24. 2006
    ....
  20. ncbi request reprint Population level functional diversity in a microbial community revealed by comparative genomic and metagenomic analyses
    Devaki Bhaya
    Department of Plant Biology, Carnegie Institution, Stanford, CA 94305, USA
    ISME J 1:703-13. 2007
    ....
  21. doi request reprint A novel two domain-fusion protein in cyanobacteria with similarity to the CAB/ELIP/HLIP superfamily: evolutionary implications and regulation
    Oliver Kilian
    Department of Plant Biology, The Carnegie Institution, Stanford, CA 94305, USA
    Mol Plant 1:155-66. 2008
    ..This additional TMH is very similar to a conserved hypothetical, single membrane-spanning polypeptide present in most cyanobacteria. The evolutionary significance of these results is discussed...
  22. doi request reprint Direct extraction of photosynthetic electrons from single algal cells by nanoprobing system
    WonHyoung Ryu
    Department of Mechanical Engineering, Stanford University, Stanford, California 94305, USA
    Nano Lett 10:1137-43. 2010
    ..This result may represent an initial step in generating "high efficiency" bioelectricity by directly harvesting high energy photosynthetic electrons...
  23. pmc Responses of a thermophilic Synechococcus isolate from the microbial mat of Octopus Spring to light
    Oliver Kilian
    Department of Plant Biology, Carnegie Institution, Stanford, CA 94305, USA
    Appl Environ Microbiol 73:4268-78. 2007
    ..The results are discussed in the context of how Synechococcus OS-B' may cope with high light irradiances in the high-temperature environment of the microbial mat...
  24. pmc A major light-harvesting polypeptide of photosystem II functions in thermal dissipation
    Dafna Elrad
    Department of Biological Sciences, Stanford University, Stanford, CA 94305, USA
    Plant Cell 14:1801-16. 2002
    ..Both physiological and molecular characterization of the npq5 mutant suggest that most thermal dissipation within LHCII of Chlamydomonas is dependent on the peripherally associated trimeric LHC polypeptides...
  25. pmc RNA-seq analysis of sulfur-deprived Chlamydomonas cells reveals aspects of acclimation critical for cell survival
    David Gonzalez-Ballester
    Department of Plant Biology, Carnegie Institution for Science, Stanford, California 94305, USA
    Plant Cell 22:2058-84. 2010
    ....
  26. pmc EST assembly supported by a draft genome sequence: an analysis of the Chlamydomonas reinhardtii transcriptome
    Monica Jain
    The Carnegie Institution, Department of Plant Biology, Stanford, CA 94305, USA
    Nucleic Acids Res 35:2074-83. 2007
    ..Our protocol, although developed for and tailored to the C. reinhardtii dataset, can be exploited by any eukaryotic genome project for which both a draft genome sequence and ESTs are available...
  27. pmc The LPB1 gene is important for acclimation of Chlamydomonas reinhardtii to phosphorus and sulfur deprivation
    Chiung Wen Chang
    Department of Plant Biology, Carnegie Institution of Washington, Stanford, California 94305, USA
    Plant Physiol 138:319-29. 2005
    ....
  28. ncbi request reprint Insights into the acclimation of Chlamydomonas reinhardtii to sulfur deprivation
    Steve V Pollock
    Department of Plant Biology, The Carnegie Institution, 260 Panama Street, Stanford, CA 94305, USA
    Photosynth Res 86:475-89. 2005
    ..reinhardtii. A speculative model, incorporating the activities of established regulatory elements with putative novel components of the signal transduction pathway(s) is discussed...
  29. ncbi request reprint The role of the STAS domain in the function and biogenesis of a sulfate transporter as probed by random mutagenesis
    Nakako Shibagaki
    Department of Plant Biology, The Carnegie Institution, Stanford, California 94305, USA
    J Biol Chem 281:22964-73. 2006
    ..These results suggest that the STAS domain is critical for both the activity and biosynthesis/stability of the transporter, and that STAS sub-domains correlate with these specific functions...
  30. pmc The central role of a SNRK2 kinase in sulfur deprivation responses
    David Gonzalez-Ballester
    Department of Plant Biology, Carnegie Institution, Stanford, CA 94305, USA
    Plant Physiol 147:216-27. 2008
    ..1 in the signaling cascade critical for eliciting S deprivation responses in Chlamydomonas. The phylogenetic relationships and structures of the eight members of the SNRK2 family in Chlamydomonas are discussed...
  31. pmc Role of polyphosphate in thermophilic Synechococcus sp. from microbial mats
    María R Gómez-García
    Carnegie Institution for Science, Department of Plant Biology, Stanford University, Stanford, California, USA
    J Bacteriol 195:3309-19. 2013
    ..We hypothesize that the opposing activities of these two enzymes allow cells to store and utilize poly P to optimize growth over a diel cycle. ..
  32. pmc Insights into the survival of Chlamydomonas reinhardtii during sulfur starvation based on microarray analysis of gene expression
    Zhaoduo Zhang
    Department of Plant Biology, The Carnegie Institute, 260 Panama St, Stanford, CA 94305, USA
    Eukaryot Cell 3:1331-48. 2004
    ..These results suggest various strategies used by photosynthetic organisms during acclimation to nutrient-limited growth...
  33. pmc Alternative pathways for phosphonate metabolism in thermophilic cyanobacteria from microbial mats
    María R Gómez-García
    Department of Plant Biology, Carnegie Institution for Science, Stanford, CA 94305, USA
    ISME J 5:141-9. 2011
    ....
  34. pmc A novel analytical method for in vivo phosphate tracking
    Hong Gu
    Carnegie Institution, Department of Plant Biology, 260 Panama Street, Stanford, CA 94305, USA
    FEBS Lett 580:5885-93. 2006
    ..FLIPPi sensors are suitable for real-time monitoring of P(i) metabolism in living cells, providing a new tool for fluxomics, analysis of pathophysiology or changes of P(i) during cell migration...
  35. pmc Reverse genetics in Chlamydomonas: a platform for isolating insertional mutants
    David Gonzalez-Ballester
    Department of Plant Biology, The Carnegie Institution for Science, Stanford, CA 94305, USA
    Plant Methods 7:24. 2011
    ....
  36. ncbi request reprint The GreenCut: re-evaluation of physiological role of previously studied proteins and potential novel protein functions
    Mark L Heinnickel
    Department of Plant Biology, Carnegie Institute for Science, 260 Panama St, Stanford, CA, USA
    Photosynth Res 116:427-36. 2013
    ..For example, our work on the CPLD38 protein has demonstrated that it has an essential role in photosynthetic function and the stability of the cytochrome b 6 f complex. ..
  37. ncbi request reprint Identification and regulation of high light-induced genes in Chlamydomonas reinhardtii
    Chung Soon Im
    Department of Plant Biology, The Carnegie Institution of Washington, 260 Panama Street, Stanford, CA 94305, USA
    Plant J 30:301-13. 2002
    ..In contrast, there was little effect of DCMU or lesions that block photosynthetic electron transport on the activity of genes that were specifically controlled by high light...
  38. pmc Chlamydomonas reinhardtii at the crossroads of genomics
    Arthur R Grossman
    The Carnegie Institution of Washington, Department of Plant Biology, Stanford, California 94305 Biology Department, Duke University, Durham, North Carolina 27708, USA
    Eukaryot Cell 2:1137-50. 2003
  39. pmc Consequences of a deletion in dspA on transcript accumulation in Synechocystis sp. strain PCC6803
    Chao Jung Tu
    Department of Plant Biology, The Carnegie Institution of Washington, 260 Panama St, Stanford, CA 94305, USA
    J Bacteriol 186:3889-902. 2004
    ..g., high-light exposure) even when maintained at near-optimal growth conditions for wild-type cells. This is discussed with respect to the importance of DspA for regulating the responses of the cell to environmental cues...
  40. pmc Fermentation metabolism and its evolution in algae
    Claudia Catalanotti
    Department of Plant Biology, Carnegie Institution for Science Stanford, CA, USA
    Front Plant Sci 4:150. 2013
    ..In this review, we focus on fermentation metabolism in Chlamydomonas and other protists, with only a brief discussion of plant fermentation when relevant, since it is thoroughly discussed in other articles in this volume...
  41. ncbi request reprint Coral bleaching independent of photosynthetic activity
    Dimitri Tolleter
    Department of Plant Biology, Carnegie Institution for Science, Stanford, CA 94305, USA
    Curr Biol 23:1782-6. 2013
    ..Elucidation of this pathway should help to clarify bleaching mechanisms under the more usual conditions of heat stress in the light...
  42. pmc Trafficking of protein into the recently established photosynthetic organelles of Paulinella chromatophora
    Eva C M Nowack
    Department of Plant Biology, Carnegie Institution for Science, Stanford, CA 94305, USA
    Proc Natl Acad Sci U S A 109:5340-5. 2012
    ..chromatophora as an exceptional model in which to study early events in organellogenesis, and suggests that protein import into bacterial endosymbionts might be a phenomenon much more widespread than currently assumed...
  43. pmc In situ analysis of nitrogen fixation and metabolic switching in unicellular thermophilic cyanobacteria inhabiting hot spring microbial mats
    Anne Soisig Steunou
    Department of Plant Biology, The Carnegie Institution, 260 Panama Street, Stanford, CA 94305, USA
    Proc Natl Acad Sci U S A 103:2398-403. 2006
    ..In a broader context, our data suggest that there are critical regulatory switches in situ that are linked to the diel cycle and that these switches alter many metabolic processes within the microbial mat...
  44. ncbi request reprint Probing the function of STAS domains of the Arabidopsis sulfate transporters
    Nakako Shibagaki
    Department of Plant Biology, The Carnegie Institution of Washington, Stanford, California 94305, USA
    J Biol Chem 279:30791-9. 2004
    ....
  45. pmc Multiple light inputs control phototaxis in Synechocystis sp. strain PCC6803
    Wing On Ng
    Department of Plant Biology, Carnegie Institution of Washington, Stanford, California 94305, USA
    J Bacteriol 185:1599-607. 2003
    ..These results suggest that while positive phototaxis is controlled by the red light photoreceptor TaxD1, negative phototaxis in Synechocystis sp. strain PCC6803 is mediated by one or more (as yet) unidentified blue light photoreceptors...
  46. doi request reprint Open micro-fluidic system for atomic force microscopy-guided in situ electrochemical probing of a single cell
    WonHyoung Ryu
    Department of Mechanical Engineering, Stanford University, Stanford, CA 94305, USA
    Lab Chip 8:1460-7. 2008
    ..The OMFC was further studied using simulation packages for optimal design conditions. This system was successfully used to measure light-dependent oxidation currents of a few pico-amperes from the green alga Chlamydomonas reinhardtii...
  47. pmc nblS, a gene involved in controlling photosynthesis-related gene expression during high light and nutrient stress in Synechococcus elongatus PCC 7942
    Lorraine G van Waasbergen
    Department of Biology, University of Texas at Arlington, Arlington, Texas 76019, USA
    J Bacteriol 184:2481-90. 2002
    ..Thus, the NblS protein is involved in the control of a number of processes critical for altering the photosynthetic apparatus in response to both HL and nutrient stress conditions...
  48. pmc AplA, a member of a new class of phycobiliproteins lacking a traditional role in photosynthetic light harvesting
    Beronda L Montgomery
    Department of Biology, Indiana University, 1001 E Third St, Bloomington, IN 47405, USA
    J Bacteriol 186:7420-8. 2004
    ..Thus, Apl proteins are a new class of photoreceptors with a different cellular location and structure than any previously described members of the phycobiliprotein superfamily...
  49. ncbi request reprint Elimination of high-light-inducible polypeptides related to eukaryotic chlorophyll a/b-binding proteins results in aberrant photoacclimation in Synechocystis PCC6803
    Michel Havaux
    CEA Cadarache, DSV, DEVM, laboratoire d écophysiologie de la photosynthèse, UMR 163 CNRS CEA, Univ Méditerranée CEA 1000, F 13108 Saint Paul lez Durance, France
    Biochim Biophys Acta 1557:21-33. 2003
    ..The data are consistent with the idea that HLIPs are involved, through a direct or indirect means, in nonphotochemical dissipation of absorbed light energy...
  50. pmc Genome-based examination of chlorophyll and carotenoid biosynthesis in Chlamydomonas reinhardtii
    Martin Lohr
    Institut für Allgemeine Botanik Johannes Gutenberg Universität, 55099 Mainz, Germany
    Plant Physiol 138:490-515. 2005
    ..This work is directing us toward the exploration of the role of specific photoreceptors in the biosynthesis of pigments and the coordination of pigment biosynthesis with the synthesis of proteins of the photosynthetic apparatus...
  51. ncbi request reprint RcaE is a complementary chromatic adaptation photoreceptor required for green and red light responsiveness
    Kazuki Terauchi
    Department of Biology, Indiana University, Bloomington, IN 47405, USA
    Mol Microbiol 51:567-77. 2004
    ....
  52. pmc The Chlamydomonas genome reveals the evolution of key animal and plant functions
    Sabeeha S Merchant
    Department of Chemistry and Biochemistry, University of California at Los Angeles, Los Angeles, CA 90095, USA
    Science 318:245-50. 2007
    ....
  53. pmc Chlamydomonas reinhardtii genome project. A guide to the generation and use of the cDNA information
    Jeff Shrager
    Biology Department, Duke University, Durham, North Carolina 27708, USA
    Plant Physiol 131:401-8. 2003
    ..We also discuss preliminary results in which the different cDNA libraries are used to identify genes that are potentially differentially expressed...
  54. ncbi request reprint In vivo characterization of diatom multipartite plastid targeting signals
    Kirk E Apt
    Martek Biosciences Corp, 6480 Dobbin Rd, Columbia, MD 21045, USA
    J Cell Sci 115:4061-9. 2002
    ..Our data strongly support the hypothesis of a multi-step plastid targeting process in chromophytic algae and raises questions about the continuity of the ER and CER and the function of the latter in polypeptide trafficking...
  55. pmc Control of photosynthetic and high-light-responsive genes by the histidine kinase DspA: negative and positive regulation and interactions between signal transduction pathways
    Hui Yi Hsiao
    Department of Applied Science, University of Arkansas at Little Rock, Little Rock, AR 72204, USA
    J Bacteriol 186:3882-8. 2004
    ..Burnap, B. L. Postier, and A. R. Grossman, J. Bacteriol. 186:3889-3902, 2004), suggest that DspA acts as a global regulator that helps coordinate cellular metabolism with growth limitations imposed by environmental conditions...