Qiang Cheng

Summary

Affiliation: Southern Illinois University
Country: USA

Publications

  1. doi request reprint Sparsity optimization method for multivariate feature screening for gene expression analysis
    Qiang Cheng
    Computer Science Department, Southern Illinois University, Carbondale, Illinois, USA
    J Comput Biol 16:1241-52. 2009
  2. doi request reprint A sparse learning machine for high-dimensional data with application to microarray gene analysis
    Qiang Cheng
    Computer Science Department, Southern Illinois University Carbondale, Carbondale, IL 62901, USA
    IEEE/ACM Trans Comput Biol Bioinform 7:636-46. 2010
  3. doi request reprint The Fisher-Markov selector: fast selecting maximally separable feature subset for multiclass classification with applications to high-dimensional data
    Qiang Cheng
    Department of Computer Science, Faner Hall, Mailcode 4511, Southern Illinois University Carbondale, 1000 Faner Drive, Carbondale, IL 62901, USA
    IEEE Trans Pattern Anal Mach Intell 33:1217-33. 2011
  4. pmc Novel regulatory small RNAs in Streptococcus pyogenes
    Rafael A Tesorero
    Department of Microbiology, Southern Illinois University, Carbondale, Illinois, United States of America
    PLoS ONE 8:e64021. 2013
  5. doi request reprint Real-time vector quantization and clustering based on ordinary differential equations
    Jie Cheng
    Department of Computer Science, University of Hawaii, Hilo, HI 96720, USA
    IEEE Trans Neural Netw 22:2143-8. 2011
  6. pmc A genome-wide analysis of RNA pseudoknots that stimulate efficient -1 ribosomal frameshifting or readthrough in animal viruses
    Xiaolan Huang
    Department of Computer Science, Southern Illinois University Carbondale, IL 62901, USA
    Biomed Res Int 2013:984028. 2013

Collaborators

  • Zhihua Du
  • Kyu Hong Cho
  • Ning Yu
  • Xiaolan Huang
  • Rafael A Tesorero
  • Jie Cheng
  • Juan P Svencionis
  • Jordan O Wright
  • Jeong Ho Kim
  • Mohammad R Sayeh
  • Mehdi R Zargham

Detail Information

Publications7

  1. doi request reprint Sparsity optimization method for multivariate feature screening for gene expression analysis
    Qiang Cheng
    Computer Science Department, Southern Illinois University, Carbondale, Illinois, USA
    J Comput Biol 16:1241-52. 2009
    ..The effectiveness of our method is confirmed by our experimental results. The computer programs will be publicly available...
  2. doi request reprint A sparse learning machine for high-dimensional data with application to microarray gene analysis
    Qiang Cheng
    Computer Science Department, Southern Illinois University Carbondale, Carbondale, IL 62901, USA
    IEEE/ACM Trans Comput Biol Bioinform 7:636-46. 2010
    ..We use conjugate gradient-based primal-dual interior-point techniques for large-scale problems. We apply our procedure to microarray gene analysis. The effectiveness of our method is confirmed by experimental results...
  3. doi request reprint The Fisher-Markov selector: fast selecting maximally separable feature subset for multiclass classification with applications to high-dimensional data
    Qiang Cheng
    Department of Computer Science, Faner Hall, Mailcode 4511, Southern Illinois University Carbondale, 1000 Faner Drive, Carbondale, IL 62901, USA
    IEEE Trans Pattern Anal Mach Intell 33:1217-33. 2011
    ....
  4. pmc Novel regulatory small RNAs in Streptococcus pyogenes
    Rafael A Tesorero
    Department of Microbiology, Southern Illinois University, Carbondale, Illinois, United States of America
    PLoS ONE 8:e64021. 2013
    ..Further, to screen target mRNAs of an sRNA, we employed differential RNA sequencing analysis. This study provides a significant resource for future study of small RNAs and their roles in physiology and pathogenesis of S. pyogenes...
  5. doi request reprint Real-time vector quantization and clustering based on ordinary differential equations
    Jie Cheng
    Department of Computer Science, University of Hawaii, Hilo, HI 96720, USA
    IEEE Trans Neural Netw 22:2143-8. 2011
    ..The proposed system is applied to two real-world problems, providing comparable results to the best reported findings. This validates the effectiveness of our proposed approach...
  6. pmc A genome-wide analysis of RNA pseudoknots that stimulate efficient -1 ribosomal frameshifting or readthrough in animal viruses
    Xiaolan Huang
    Department of Computer Science, Southern Illinois University Carbondale, IL 62901, USA
    Biomed Res Int 2013:984028. 2013
    ..A novel mechanism is proposed for possible involvement of the elaborated pseudoknots in the HIV1 PRF event. ..