G A Babbitt

Summary

Affiliation: Rochester Institute of Technology
Country: USA

Publications

  1. pmc Synonymous codon bias and functional constraint on GC3-related DNA backbone dynamics in the prokaryotic nucleoid
    Gregory A Babbitt
    Thomas H Gosnell School of Life Sciences, Rochester Institute of Technology, Rochester NY, USA 14623
    Nucleic Acids Res 42:10915-26. 2014
  2. pmc Functional conservation of nucleosome formation selectively biases presumably neutral molecular variation in yeast genomes
    Gregory A Babbitt
    School of Biological and Medical Sciences, Rochester Institute of Technology
    Genome Biol Evol 3:15-22. 2011
  3. pmc Codons support the maintenance of intrinsic DNA polymer flexibility over evolutionary timescales
    G A Babbitt
    TH Gosnell School of Life Sciences, Rochester Institute of Technology, Rochester, NY, USA
    Genome Biol Evol 4:954-65. 2012
  4. ncbi request reprint The molecular evolution of nucleosome positioning through sequence-dependent deformation of the DNA polymer
    G A Babbitt
    School of Biological and Medical Sciences, Rochester Institute of Technology, Rochester, NY, USA
    J Biomol Struct Dyn 27:765-80. 2010
  5. doi request reprint Relaxed selection against accidental binding of transcription factors with conserved chromatin contexts
    G A Babbitt
    School of Biological and Medical Sciences, Rochester Institute of Technology, USA
    Gene 466:43-8. 2010

Collaborators

Detail Information

Publications6

  1. pmc Synonymous codon bias and functional constraint on GC3-related DNA backbone dynamics in the prokaryotic nucleoid
    Gregory A Babbitt
    Thomas H Gosnell School of Life Sciences, Rochester Institute of Technology, Rochester NY, USA 14623
    Nucleic Acids Res 42:10915-26. 2014
    ..We propose that synonymous sites may have evolved as an 'accessory' during an early expansion of a primordial genetic code, allowing for multiplexed protein coding and structural dynamic information within the same molecular context. ..
  2. pmc Functional conservation of nucleosome formation selectively biases presumably neutral molecular variation in yeast genomes
    Gregory A Babbitt
    School of Biological and Medical Sciences, Rochester Institute of Technology
    Genome Biol Evol 3:15-22. 2011
    ....
  3. pmc Codons support the maintenance of intrinsic DNA polymer flexibility over evolutionary timescales
    G A Babbitt
    TH Gosnell School of Life Sciences, Rochester Institute of Technology, Rochester, NY, USA
    Genome Biol Evol 4:954-65. 2012
    ....
  4. ncbi request reprint The molecular evolution of nucleosome positioning through sequence-dependent deformation of the DNA polymer
    G A Babbitt
    School of Biological and Medical Sciences, Rochester Institute of Technology, Rochester, NY, USA
    J Biomol Struct Dyn 27:765-80. 2010
    ....
  5. doi request reprint Relaxed selection against accidental binding of transcription factors with conserved chromatin contexts
    G A Babbitt
    School of Biological and Medical Sciences, Rochester Institute of Technology, USA
    Gene 466:43-8. 2010
    ..These results indicate a role of chromatin context dependency in relaxing selection against spurious binding in nearly half of all TF binding motifs throughout the yeast genome...