Peter Andolfatto

Summary

Affiliation: Princeton University
Country: USA

Publications

  1. pmc Controlling type-I error of the McDonald-Kreitman test in genomewide scans for selection on noncoding DNA
    Peter Andolfatto
    Department of Ecology and Evolutionary Biology, Princeton University, Princeton, New Jersey 08544, USA
    Genetics 180:1767-71. 2008
  2. pmc Effective population size and the efficacy of selection on the X chromosomes of two closely related Drosophila species
    Peter Andolfatto
    Department of Ecology and Evolutionary Biology and Lewis Sigler Institute for Integrative Genomics, Princeton University, USA
    Genome Biol Evol 3:114-28. 2011
  3. pmc Multiplexed shotgun genotyping for rapid and efficient genetic mapping
    Peter Andolfatto
    Department of Ecology and Evolutionary Biology, Princeton University, Princeton, NJ 08544, USA
    Genome Res 21:610-7. 2011
  4. pmc Reproductive isolation of hybrid populations driven by genetic incompatibilities
    Molly Schumer
    Department of Ecology and Evolutionary Biology, Princeton University, Princeton, New Jersey, United States of America
    PLoS Genet 11:e1005041. 2015
  5. pmc A second-generation assembly of the Drosophila simulans genome provides new insights into patterns of lineage-specific divergence
    Tina T Hu
    Department of Ecology and Evolutionary Biology and the Lewis Sigler Institute for Integrative Genomics, Princeton University, Princeton, New Jersey 08544, USA
    Genome Res 23:89-98. 2013
  6. doi request reprint How common is homoploid hybrid speciation?
    Molly Schumer
    Department of Ecology and Evolutionary Biology, Princeton University, Princeton, New Jersey, 08544
    Evolution 68:1553-60. 2014
  7. pmc An evaluation of the hybrid speciation hypothesis for Xiphophorus clemenciae based on whole genome sequences
    Molly Schumer
    Department of Ecology and Evolutionary Biology, Princeton University, Princeton, New Jersey 08544, USA
    Evolution 67:1155-68. 2013

Detail Information

Publications7

  1. pmc Controlling type-I error of the McDonald-Kreitman test in genomewide scans for selection on noncoding DNA
    Peter Andolfatto
    Department of Ecology and Evolutionary Biology, Princeton University, Princeton, New Jersey 08544, USA
    Genetics 180:1767-71. 2008
    ..I propose that establishing significance levels by coalescent simulation with recombination can improve the fidelity of the test in genomewide scans for selection on noncoding DNA...
  2. pmc Effective population size and the efficacy of selection on the X chromosomes of two closely related Drosophila species
    Peter Andolfatto
    Department of Ecology and Evolutionary Biology and Lewis Sigler Institute for Integrative Genomics, Princeton University, USA
    Genome Biol Evol 3:114-28. 2011
    ....
  3. pmc Multiplexed shotgun genotyping for rapid and efficient genetic mapping
    Peter Andolfatto
    Department of Ecology and Evolutionary Biology, Princeton University, Princeton, NJ 08544, USA
    Genome Res 21:610-7. 2011
    ..Our analysis suggests that higher levels of multiplexing and/or use of strains with lower levels of divergence are practicable...
  4. pmc Reproductive isolation of hybrid populations driven by genetic incompatibilities
    Molly Schumer
    Department of Ecology and Evolutionary Biology, Princeton University, Princeton, New Jersey, United States of America
    PLoS Genet 11:e1005041. 2015
    ..Intriguingly, several known hybrid species exhibit patterns of reproductive isolation consistent with the predictions of our model. ..
  5. pmc A second-generation assembly of the Drosophila simulans genome provides new insights into patterns of lineage-specific divergence
    Tina T Hu
    Department of Ecology and Evolutionary Biology and the Lewis Sigler Institute for Integrative Genomics, Princeton University, Princeton, New Jersey 08544, USA
    Genome Res 23:89-98. 2013
    ..Our results have more general implications for the interpretation of evolutionary analyses of genomes of different quality...
  6. doi request reprint How common is homoploid hybrid speciation?
    Molly Schumer
    Department of Ecology and Evolutionary Biology, Princeton University, Princeton, New Jersey, 08544
    Evolution 68:1553-60. 2014
    ..Based on an evaluation of the literature using this framework, we conclude that although hybridization appears to be common, evidence for an important role of hybridization in homoploid speciation is more circumscribed. ..
  7. pmc An evaluation of the hybrid speciation hypothesis for Xiphophorus clemenciae based on whole genome sequences
    Molly Schumer
    Department of Ecology and Evolutionary Biology, Princeton University, Princeton, New Jersey 08544, USA
    Evolution 67:1155-68. 2013
    ..The direction of gene flow between species is potentially consistent with a role for sexual selection in mediating hybridization...