Nicole A R Walter

Summary

Affiliation: Oregon Health and Science University
Country: USA

Publications

  1. ncbi The potential significance of adaptive evolution and dimerization in chimpanzee intercellular cell adhesion molecules (ICAMs)
    Nicole A R Walter
    Evolutionary Genomics, Colorado Bioscience Park Center, 12635 East Montview Boulevard, Aurora, Colorado 80010, USA
    J Theor Biol 232:339-46. 2005
  2. ncbi High throughput sequencing in mice: a platform comparison identifies a preponderance of cryptic SNPs
    Nicole A R Walter
    Research and Development Service, Portland VA Medical Center, Portland, OR, USA
    BMC Genomics 10:379. 2009
  3. ncbi Mapping a barbiturate withdrawal locus to a 0.44 Mb interval and analysis of a novel null mutant identify a role for Kcnj9 (GIRK3) in withdrawal from pentobarbital, zolpidem, and ethanol
    Laura B Kozell
    Department of Behavioral Neuroscience, Veterans Affairs Medical Center and Oregon Health and Science University, Portland, Oregon 97239 3098, USA
    J Neurosci 29:11662-73. 2009
  4. ncbi Computational detection of alternative exon usage
    Ted G Laderas
    Oregon Clinical Research and Translational Institute, Oregon Health and Science University Portland, OR, USA
    Front Neurosci 5:69. 2011
  5. ncbi Genetic diversity and striatal gene networks: focus on the heterogeneous stock-collaborative cross (HS-CC) mouse
    Ovidiu D Iancu
    Department of Behavioral Neuroscience, Oregon Health and Science University, Portland, OR, USA
    BMC Genomics 11:585. 2010
  6. ncbi Evaluating gene expression in C57BL/6J and DBA/2J mouse striatum using RNA-Seq and microarrays
    Daniel Bottomly
    Oregon Clinical and Translational Research Institute, Oregon Health and Science University, Portland, Oregon, United States of America
    PLoS ONE 6:e17820. 2011
  7. ncbi Mpdz is a quantitative trait gene for drug withdrawal seizures
    Renee L Shirley
    Portland Alcohol Research Center and Department of Behavioral Neuroscience, Oregon Health and Science University, and the Department of Veterans Affairs Medical Center, 3181 SW Sam Jackson Park Road, mailcode L 470, Portland, Oregon 97239 3098, USA
    Nat Neurosci 7:699-700. 2004

Detail Information

Publications7

  1. ncbi The potential significance of adaptive evolution and dimerization in chimpanzee intercellular cell adhesion molecules (ICAMs)
    Nicole A R Walter
    Evolutionary Genomics, Colorado Bioscience Park Center, 12635 East Montview Boulevard, Aurora, Colorado 80010, USA
    J Theor Biol 232:339-46. 2005
    ....
  2. ncbi High throughput sequencing in mice: a platform comparison identifies a preponderance of cryptic SNPs
    Nicole A R Walter
    Research and Development Service, Portland VA Medical Center, Portland, OR, USA
    BMC Genomics 10:379. 2009
    ..With the advent of next-generation, high-throughput sequencing, we are now in a position to determine to what extent polymorphisms are currently cryptic in such models and their impact on downstream analyses...
  3. ncbi Mapping a barbiturate withdrawal locus to a 0.44 Mb interval and analysis of a novel null mutant identify a role for Kcnj9 (GIRK3) in withdrawal from pentobarbital, zolpidem, and ethanol
    Laura B Kozell
    Department of Behavioral Neuroscience, Veterans Affairs Medical Center and Oregon Health and Science University, Portland, Oregon 97239 3098, USA
    J Neurosci 29:11662-73. 2009
    ..Thus, our results will be primary to additional efforts to identify genes involved in a wide variety of behavioral responses to sedative-hypnotics and may directly facilitate progress in human genetics...
  4. ncbi Computational detection of alternative exon usage
    Ted G Laderas
    Oregon Clinical Research and Translational Institute, Oregon Health and Science University Portland, OR, USA
    Front Neurosci 5:69. 2011
    ..g., gene, transcripts) and the entity (e.g., exon, probeset) within the statistical model. The framework we present is broadly applicable to other platforms (including RNAseq)...
  5. ncbi Genetic diversity and striatal gene networks: focus on the heterogeneous stock-collaborative cross (HS-CC) mouse
    Ovidiu D Iancu
    Department of Behavioral Neuroscience, Oregon Health and Science University, Portland, OR, USA
    BMC Genomics 11:585. 2010
    ..Brain (striatum) gene expression data were obtained using the Illumina Mouse WG 6.1 array, and the data sets were interrogated using a weighted gene co-expression network analysis (WGCNA)...
  6. ncbi Evaluating gene expression in C57BL/6J and DBA/2J mouse striatum using RNA-Seq and microarrays
    Daniel Bottomly
    Oregon Clinical and Translational Research Institute, Oregon Health and Science University, Portland, Oregon, United States of America
    PLoS ONE 6:e17820. 2011
    ....
  7. ncbi Mpdz is a quantitative trait gene for drug withdrawal seizures
    Renee L Shirley
    Portland Alcohol Research Center and Department of Behavioral Neuroscience, Oregon Health and Science University, and the Department of Veterans Affairs Medical Center, 3181 SW Sam Jackson Park Road, mailcode L 470, Portland, Oregon 97239 3098, USA
    Nat Neurosci 7:699-700. 2004
    ..Our findings provide a framework to define the protein interactions and neural circuit by which this gene's product (multiple PDZ domain protein) affects drug dependence, withdrawal and relapse...