Aaron Michael Cohen

Summary

Affiliation: Oregon Health and Science University
Country: USA

Publications

  1. pmc Studying the potential impact of automated document classification on scheduling a systematic review update
    Aaron M Cohen
    Department of Medical Informatics and Clinical Epidemiology, Oregon Health and Science University, Portland, OR, USA
    BMC Med Inform Decis Mak 12:33. 2012
  2. pmc Evaluation of a gene information summarization system by users during the analysis process of microarray datasets
    Jianji Yang
    Department of Medical Informatics and Clinical Epidemiology, Oregon Health and Science University, Portland, Oregon 97239, USA
    BMC Bioinformatics 10:S5. 2009
  3. ncbi request reprint A categorization and analysis of the criticisms of Evidence-Based Medicine
    Aaron Michael Cohen
    Department of Medical Informatics and Clinical Epidemiology, School of Medicine, Oregon Health and Science University, 3181 S W Sam Jackson Park Road, Mail Code BICC, Portland, OR 97239 3098, USA
    Int J Med Inform 73:35-43. 2004
  4. ncbi request reprint A survey of current work in biomedical text mining
    Aaron M Cohen
    Department of Medical Informatics and Clinical Epidemiology, School of Medicine, Oregon Health and Science University, 3181 S W Sam Jackson Park Road, Portland, OR 97239 309, USA
    Brief Bioinform 6:57-71. 2005
  5. pmc Using co-occurrence network structure to extract synonymous gene and protein names from MEDLINE abstracts
    A M Cohen
    Department of Medical Informatics and Clinical Epidemiology, School of Medicine, Oregon Health and Science University, 3181 S, W, Sam Jackson Park Road, Portland, Oregon 97239 3098, USA
    BMC Bioinformatics 6:103. 2005
  6. pmc Reducing workload in systematic review preparation using automated citation classification
    A M Cohen
    Department of Medical Informatics and Clinical Epidemiology, School of Medicine, Oregon Health and Science University, 3181 S W Sam Jackson Park Road, Mail Code BICC, Portland, OR 97239 3098, USA
    J Am Med Inform Assoc 13:206-19. 2006
  7. pmc Five-way smoking status classification using text hot-spot identification and error-correcting output codes
    Aaron M Cohen
    Department of Medical Informatics and Clinical Epidemiology, School of Medicine, Oregon Health and Science University, 3181 S W Sam Jackson Park Road, Mail Code BICC, Portland, OR, 97239 3098, USA
    J Am Med Inform Assoc 15:32-5. 2008
  8. pmc Cross-topic learning for work prioritization in systematic review creation and update
    Aaron M Cohen
    Department of Medical Informatics, Clinical Epidemiology, School of Medicine, Oregon Health and Science University, 3181 S W Sam Jackson Park Road, Mail Code BICC, Portland, OR 97239 3098, USA
    J Am Med Inform Assoc 16:690-704. 2009

Collaborators

Detail Information

Publications9

  1. pmc Studying the potential impact of automated document classification on scheduling a systematic review update
    Aaron M Cohen
    Department of Medical Informatics and Clinical Epidemiology, Oregon Health and Science University, Portland, OR, USA
    BMC Med Inform Decis Mak 12:33. 2012
    ..Although the question of how and when to update SRs has been studied, the best method for determining when to update is still unclear, necessitating further research...
  2. pmc Evaluation of a gene information summarization system by users during the analysis process of microarray datasets
    Jianji Yang
    Department of Medical Informatics and Clinical Epidemiology, Oregon Health and Science University, Portland, Oregon 97239, USA
    BMC Bioinformatics 10:S5. 2009
    ..The system evaluation was conducted during the process of genomic researchers analyzing their own experimental microarray datasets...
  3. ncbi request reprint A categorization and analysis of the criticisms of Evidence-Based Medicine
    Aaron Michael Cohen
    Department of Medical Informatics and Clinical Epidemiology, School of Medicine, Oregon Health and Science University, 3181 S W Sam Jackson Park Road, Mail Code BICC, Portland, OR 97239 3098, USA
    Int J Med Inform 73:35-43. 2004
    ....
  4. ncbi request reprint A survey of current work in biomedical text mining
    Aaron M Cohen
    Department of Medical Informatics and Clinical Epidemiology, School of Medicine, Oregon Health and Science University, 3181 S W Sam Jackson Park Road, Portland, OR 97239 309, USA
    Brief Bioinform 6:57-71. 2005
    ....
  5. pmc Using co-occurrence network structure to extract synonymous gene and protein names from MEDLINE abstracts
    A M Cohen
    Department of Medical Informatics and Clinical Epidemiology, School of Medicine, Oregon Health and Science University, 3181 S, W, Sam Jackson Park Road, Portland, Oregon 97239 3098, USA
    BMC Bioinformatics 6:103. 2005
    ..The method was applied to the task of automatic gene and protein name synonym extraction...
  6. pmc Reducing workload in systematic review preparation using automated citation classification
    A M Cohen
    Department of Medical Informatics and Clinical Epidemiology, School of Medicine, Oregon Health and Science University, 3181 S W Sam Jackson Park Road, Mail Code BICC, Portland, OR 97239 3098, USA
    J Am Med Inform Assoc 13:206-19. 2006
    ..To determine whether automated classification of document citations can be useful in reducing the time spent by experts reviewing journal articles for inclusion in updating systematic reviews of drug class efficacy for treatment of disease...
  7. pmc Five-way smoking status classification using text hot-spot identification and error-correcting output codes
    Aaron M Cohen
    Department of Medical Informatics and Clinical Epidemiology, School of Medicine, Oregon Health and Science University, 3181 S W Sam Jackson Park Road, Mail Code BICC, Portland, OR, 97239 3098, USA
    J Am Med Inform Assoc 15:32-5. 2008
    ..High performance on automatic identification of patient smoking status from discharge summaries is achievable with the efficient and straightforward machine learning techniques studied here...
  8. pmc Cross-topic learning for work prioritization in systematic review creation and update
    Aaron M Cohen
    Department of Medical Informatics, Clinical Epidemiology, School of Medicine, Oregon Health and Science University, 3181 S W Sam Jackson Park Road, Mail Code BICC, Portland, OR 97239 3098, USA
    J Am Med Inform Assoc 16:690-704. 2009
    ..This work investigates whether a topic-specific automated document ranking system for SRs can be improved using a hybrid approach, combining topic-specific training data with data from other SR topics...

Research Grants3

  1. Assisting Systematic Review Preparation Using Automated Document Classification
    Aaron Cohen; Fiscal Year: 2007
    ..Since up-to-date systematic reviews are essential for establishing widespread high quality practice standards and guidelines, the overall public health will benefit from this work. ..
  2. Assisting Systematic Review Preparation Using Automated Document Classification
    Aaron Cohen; Fiscal Year: 2009
    ..Since up-to-date systematic reviews are essential for establishing widespread high quality practice standards and guidelines, the overall public health will benefit from this work. ..