Jens Lichtenberg

Summary

Affiliation: Ohio University
Country: USA

Publications

  1. ncbi Word-based characterization of promoters involved in human DNA repair pathways
    Jens Lichtenberg
    Bioinformatics Laboratory, School of Electrical Engineering and Computer Science, Ohio University, Athens, Ohio, USA
    BMC Genomics 10:S18. 2009
  2. ncbi The word landscape of the non-coding segments of the Arabidopsis thaliana genome
    Jens Lichtenberg
    Bioinformatics Laboratory, School of Electrical Engineering and Computer Science, Ohio University, Athens, OH, USA
    BMC Genomics 10:463. 2009
  3. ncbi WordSeeker: concurrent bioinformatics software for discovering genome-wide patterns and word-based genomic signatures
    Jens Lichtenberg
    Bioinformatics Laboratory, School of EECS, Ohio University, Athens, Ohio 45701, USA
    BMC Bioinformatics 11:S6. 2010
  4. ncbi The SiteSeeker motif discovery tool
    Klaus Ecker
    Russ College of Engineering and Technology, Ohio University Athens, Ohio, USA
    In Silico Biol 9:11-22. 2009
  5. ncbi A bioinformatics approach to the identification, classification, and analysis of hydroxyproline-rich glycoproteins
    Allan M Showalter
    Molecular and Cellular Biology Program, Department of Environmental and Plant Biology, Ohio University, Athens, OH 45701 2979, USA
    Plant Physiol 153:485-513. 2010

Detail Information

Publications5

  1. ncbi Word-based characterization of promoters involved in human DNA repair pathways
    Jens Lichtenberg
    Bioinformatics Laboratory, School of Electrical Engineering and Computer Science, Ohio University, Athens, Ohio, USA
    BMC Genomics 10:S18. 2009
    ....
  2. ncbi The word landscape of the non-coding segments of the Arabidopsis thaliana genome
    Jens Lichtenberg
    Bioinformatics Laboratory, School of Electrical Engineering and Computer Science, Ohio University, Athens, OH, USA
    BMC Genomics 10:463. 2009
    ..The frequencies and positional distributions of these words within particular non-coding genomic segments provide important insights into how the words function in processes such as mRNA stability and regulation of gene expression...
  3. ncbi WordSeeker: concurrent bioinformatics software for discovering genome-wide patterns and word-based genomic signatures
    Jens Lichtenberg
    Bioinformatics Laboratory, School of EECS, Ohio University, Athens, Ohio 45701, USA
    BMC Bioinformatics 11:S6. 2010
    ..Although a number of methods have been developed for motif discovery, most of them lack the scalability needed to analyze large genomic data sets...
  4. ncbi The SiteSeeker motif discovery tool
    Klaus Ecker
    Russ College of Engineering and Technology, Ohio University Athens, Ohio, USA
    In Silico Biol 9:11-22. 2009
    ..A set of At promoters were used as a benchmark for a comparative test against five known tools. It could be verified that SiteSeeker significantly outperformed these tools...
  5. ncbi A bioinformatics approach to the identification, classification, and analysis of hydroxyproline-rich glycoproteins
    Allan M Showalter
    Molecular and Cellular Biology Program, Department of Environmental and Plant Biology, Ohio University, Athens, OH 45701 2979, USA
    Plant Physiol 153:485-513. 2010
    ....