Timothy J Tschaplinski

Summary

Affiliation: Oak Ridge National Laboratory
Country: USA

Publications

  1. pmc Improvement of cellulose catabolism in Clostridium cellulolyticum by sporulation abolishment and carbon alleviation
    Yongchao Li
    Institute for Environmental Genomics and Department of Microbiology and Plant Biology, University of Oklahoma, 101 David L, Boren Boulevard, Norman, OK 73019, USA
    Biotechnol Biofuels 7:25. 2014
  2. pmc Enhanced characteristics of genetically modified switchgrass (Panicum virgatum L.) for high biofuel production
    Hui Shen
    Plant Biology Division, Samuel Roberts Noble Foundation, 2510 Sam Noble Parkway, Ardmore, OK, 73401, USA
    Biotechnol Biofuels 6:71. 2013
  3. pmc Clostridium thermocellum ATCC27405 transcriptomic, metabolomic and proteomic profiles after ethanol stress
    Shihui Yang
    Biosciences Division, Oak Ridge National Laboratory, 1 Bethel Valley Road, Oak Ridge, Tennessee 37831, USA
    BMC Genomics 13:336. 2012
  4. pmc Down-regulation of the caffeic acid O-methyltransferase gene in switchgrass reveals a novel monolignol analog
    Timothy J Tschaplinski
    Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, 37831 6341, USA
    Biotechnol Biofuels 5:71. 2012
  5. pmc Combined inactivation of the Clostridium cellulolyticum lactate and malate dehydrogenase genes substantially increases ethanol yield from cellulose and switchgrass fermentations
    Yongchao Li
    Biosciences Division, Oak Ridge National Laboratory, PO Box 2008, MS 6038, Oak Ridge, TN 37831 6038, USA
    Biotechnol Biofuels 5:2. 2012
  6. pmc Apoplast proteome reveals that extracellular matrix contributes to multistress response in poplar
    Olga Pechanova
    Department of Forestry, Mississippi State University, Mississippi State, MS 39762, USA
    BMC Genomics 11:674. 2010
  7. pmc Transcriptomic and metabolomic profiling of Zymomonas mobilis during aerobic and anaerobic fermentations
    Shihui Yang
    Biosciences Division and BioEnergy Science Center, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA
    BMC Genomics 10:34. 2009
  8. pmc Systems biology analysis of Zymomonas mobilis ZM4 ethanol stress responses
    Shihui Yang
    Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee, United States of America
    PLoS ONE 8:e68886. 2013
  9. pmc Industrial robustness: understanding the mechanism of tolerance for the Populus hydrolysate-tolerant mutant strain of Clostridium thermocellum
    Jessica L Linville
    Department of Civil and Environmental Engineering, University of Tennessee, Knoxville, Tennessee, United States of America BioEnergy Science Center, Oak Ridge National Laboratory, Oak Ridge, Tennessee, United States of America
    PLoS ONE 8:e78829. 2013
  10. ncbi request reprint Nitrogen and sulfur requirements for Clostridium thermocellum and Caldicellulosiruptor bescii on cellulosic substrates in minimal nutrient media
    Donna M Kridelbaugh
    Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831 6038, United States
    Bioresour Technol 130:125-35. 2013

Collaborators

  • Jonathan R Mielenz
  • Ying Xu
  • Shihui Yang
  • Jeremy C Smith
  • Steven D Brown
  • Nancy L Engle
  • Yongchao Li
  • David E Graham
  • Miguel Rodriguez
  • Donna M Kridelbaugh
  • Hui Shen
  • Yunfeng Yang
  • Jessica L Linville
  • Kelsey L Yee
  • Olga Pechanova
  • Jizhong Zhou
  • Zhili He
  • Tao Xu
  • Mark Davis
  • Charleson R Poovaiah
  • Robert Sykes
  • Fang Chen
  • Mustafa H Syed
  • Michael G Hahn
  • Miriam Land
  • Angela Ziebell
  • Joshua Nelson
  • Erica Gjersing
  • C Neal Stewart
  • Rui Katahira
  • Sivakumar Pattathil
  • Arthur J Ragauskas
  • Yunqiao Pu
  • Richard A Dixon
  • Chris D Cox
  • Choo Y Hamilton
  • Adam M Guss
  • Madhavi Z Martin
  • Scott D Hamilton-Brehm
  • Zeng Yu Wang
  • Christopher W Schadt
  • Chunxiang Fu
  • James C Liao
  • Armand Seguin
  • Lindsay Vandervelde
  • Joshua P Adams
  • Amanda M Lawrence
  • Sara Jawdy
  • Jenny Drnevich
  • Jeffrey C Suttle
  • Tibor Pechan
  • Chuan Yu Hsu
  • Cetin Yuceer
  • Ardeshir Adeli

Detail Information

Publications11

  1. pmc Improvement of cellulose catabolism in Clostridium cellulolyticum by sporulation abolishment and carbon alleviation
    Yongchao Li
    Institute for Environmental Genomics and Department of Microbiology and Plant Biology, University of Oklahoma, 101 David L, Boren Boulevard, Norman, OK 73019, USA
    Biotechnol Biofuels 7:25. 2014
    ..In this study, two metabolic engineering strategies were exploited to improve cellulose utilization efficiency, including sporulation abolishment and carbon overload alleviation...
  2. pmc Enhanced characteristics of genetically modified switchgrass (Panicum virgatum L.) for high biofuel production
    Hui Shen
    Plant Biology Division, Samuel Roberts Noble Foundation, 2510 Sam Noble Parkway, Ardmore, OK, 73401, USA
    Biotechnol Biofuels 6:71. 2013
    ..We here describe the properties of switchgrass (Panicum virgatum) biomass that has been genetically engineered to increase the cellulosic ethanol yield by more than 2-fold...
  3. pmc Clostridium thermocellum ATCC27405 transcriptomic, metabolomic and proteomic profiles after ethanol stress
    Shihui Yang
    Biosciences Division, Oak Ridge National Laboratory, 1 Bethel Valley Road, Oak Ridge, Tennessee 37831, USA
    BMC Genomics 13:336. 2012
    ..thermocellum is relatively sensitive to ethanol compared to ethanologenic microorganisms such as yeast and Zymomonas mobilis that are used in industrial fermentations but do not possess native enzymes for industrial cellulose hydrolysis...
  4. pmc Down-regulation of the caffeic acid O-methyltransferase gene in switchgrass reveals a novel monolignol analog
    Timothy J Tschaplinski
    Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, 37831 6341, USA
    Biotechnol Biofuels 5:71. 2012
    ..abstract:..
  5. pmc Combined inactivation of the Clostridium cellulolyticum lactate and malate dehydrogenase genes substantially increases ethanol yield from cellulose and switchgrass fermentations
    Yongchao Li
    Biosciences Division, Oak Ridge National Laboratory, PO Box 2008, MS 6038, Oak Ridge, TN 37831 6038, USA
    Biotechnol Biofuels 5:2. 2012
    ..abstract:..
  6. pmc Apoplast proteome reveals that extracellular matrix contributes to multistress response in poplar
    Olga Pechanova
    Department of Forestry, Mississippi State University, Mississippi State, MS 39762, USA
    BMC Genomics 11:674. 2010
    ..We have little understanding of mechanisms by which riverine plant species have developed adaptive strategies to cope with stress in dynamic environments while maintaining growth and development...
  7. pmc Transcriptomic and metabolomic profiling of Zymomonas mobilis during aerobic and anaerobic fermentations
    Shihui Yang
    Biosciences Division and BioEnergy Science Center, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA
    BMC Genomics 10:34. 2009
    ..Z. mobilis performs best under anaerobic conditions, but is an aerotolerant organism. However, the genetic and physiological basis of ZM4's response to various stresses is understood poorly...
  8. pmc Systems biology analysis of Zymomonas mobilis ZM4 ethanol stress responses
    Shihui Yang
    Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee, United States of America
    PLoS ONE 8:e68886. 2013
    ..However, the molecular mechanisms of its ethanol stress response have not been elucidated fully...
  9. pmc Industrial robustness: understanding the mechanism of tolerance for the Populus hydrolysate-tolerant mutant strain of Clostridium thermocellum
    Jessica L Linville
    Department of Civil and Environmental Engineering, University of Tennessee, Knoxville, Tennessee, United States of America BioEnergy Science Center, Oak Ridge National Laboratory, Oak Ridge, Tennessee, United States of America
    PLoS ONE 8:e78829. 2013
    ..Microbial processes leading to tolerance of these inhibitory compounds found in the pretreated biomass hydrolysate are likely complex and involve multiple genes...
  10. ncbi request reprint Nitrogen and sulfur requirements for Clostridium thermocellum and Caldicellulosiruptor bescii on cellulosic substrates in minimal nutrient media
    Donna M Kridelbaugh
    Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831 6038, United States
    Bioresour Technol 130:125-35. 2013
    ..Both bacterial populations were maintained in co-cultures with substrates containing cellulose and xylan in defined medium with sulfate and basal vitamin supplements...
  11. pmc Evaluation of the bioconversion of genetically modified switchgrass using simultaneous saccharification and fermentation and a consolidated bioprocessing approach
    Kelsey L Yee
    Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, 37831 6226, USA
    Biotechnol Biofuels 5:81. 2012
    ..abstract:..