David W Petersen

Summary

Affiliation: National Institutes of Health
Country: USA

Publications

  1. ncbi Manufacturing of microarrays
    David W Petersen
    SAIC Frederick, Inc, Gaithersburg, Maryland, USA
    Adv Exp Med Biol 593:1-11. 2007
  2. ncbi Changes in gene expression during the development of mammary tumors in MMTV-Wnt-1 transgenic mice
    Shixia Huang
    Program in Cancer Biology and Genetics, Sloan Kettering Institute, New York, NY 10021, USA
    Genome Biol 6:R84. 2005
  3. ncbi Three microarray platforms: an analysis of their concordance in profiling gene expression
    David Petersen
    Advanced Technology Center, Center for Cancer Research, National Cancer Institute, Gaithersburg, MD 20877, USA
    BMC Genomics 6:63. 2005
  4. ncbi T7-based linear amplification of low concentration mRNA samples using beads and microfluidics for global gene expression measurements
    Jason G Kralj
    National Institute of Standards and Technology, 100 Bureau Dr MS 8313, Gaithersburg, MD, USA
    Lab Chip 9:917-24. 2009
  5. ncbi Core biopsies can be used to distinguish differences in expression profiling by cDNA microarrays
    Christos Sotiriou
    Medicine Branch, Division of Clinical Sciences, National Cancer Institute, National Institutes of Health, Gaithersburg, Maryland, USA
    J Mol Diagn 4:30-6. 2002
  6. ncbi Identification of new Rel/NFkappaB regulatory networks by focused genome location analysis
    Adriana De Siervi
    Laboratory of Receptor Biology and Gene Expression, National Cancer Institute, Bethesda, MD 20892, USA
    Cell Cycle 8:2093-100. 2009
  7. ncbi Kinetic profiles of p300 occupancy in vivo predict common features of promoter structure and coactivator recruitment
    James L Smith
    Laboratory of Receptor Biology and Gene Expression and Microarray Facility, Advanced Technology Center, National Cancer Institute, Bethesda, MD 20892, USA
    Proc Natl Acad Sci U S A 101:11554-9. 2004

Collaborators

Detail Information

Publications7

  1. ncbi Manufacturing of microarrays
    David W Petersen
    SAIC Frederick, Inc, Gaithersburg, Maryland, USA
    Adv Exp Med Biol 593:1-11. 2007
    ..While the fabrication of microarrays is a very labor-intensive process, production of quality microarrays individually tailored on a project-by-project basis will help researchers shed light on future scientific questions...
  2. ncbi Changes in gene expression during the development of mammary tumors in MMTV-Wnt-1 transgenic mice
    Shixia Huang
    Program in Cancer Biology and Genetics, Sloan Kettering Institute, New York, NY 10021, USA
    Genome Biol 6:R84. 2005
    ..These mice might therefore be useful models for discovering changes in gene expression during cancer development...
  3. ncbi Three microarray platforms: an analysis of their concordance in profiling gene expression
    David Petersen
    Advanced Technology Center, Center for Cancer Research, National Cancer Institute, Gaithersburg, MD 20877, USA
    BMC Genomics 6:63. 2005
    ..As part of a validation study for the long oligonucleotide arrays, we compared and contrasted expression profiles from the three formats, testing RNA from six different cell lines against a universal reference standard...
  4. ncbi T7-based linear amplification of low concentration mRNA samples using beads and microfluidics for global gene expression measurements
    Jason G Kralj
    National Institute of Standards and Technology, 100 Bureau Dr MS 8313, Gaithersburg, MD, USA
    Lab Chip 9:917-24. 2009
    ..Microfluidic IVT introduces no bias to the gene expression profile of the sample and provides more efficient transcription of mRNA sequences present at the single-cell level...
  5. ncbi Core biopsies can be used to distinguish differences in expression profiling by cDNA microarrays
    Christos Sotiriou
    Medicine Branch, Division of Clinical Sciences, National Cancer Institute, National Institutes of Health, Gaithersburg, Maryland, USA
    J Mol Diagn 4:30-6. 2002
    ..Pooling the core biopsies did not improve the concordance with excisional biopsies. In conclusion, our results suggest that core biopsies can be used as a suitable and reliable material for the determination of tumor genetic profiles...
  6. ncbi Identification of new Rel/NFkappaB regulatory networks by focused genome location analysis
    Adriana De Siervi
    Laboratory of Receptor Biology and Gene Expression, National Cancer Institute, Bethesda, MD 20892, USA
    Cell Cycle 8:2093-100. 2009
    ....
  7. ncbi Kinetic profiles of p300 occupancy in vivo predict common features of promoter structure and coactivator recruitment
    James L Smith
    Laboratory of Receptor Biology and Gene Expression and Microarray Facility, Advanced Technology Center, National Cancer Institute, Bethesda, MD 20892, USA
    Proc Natl Acad Sci U S A 101:11554-9. 2004
    ..This "reverse genomic" approach will have broad application for the genome-wide classification of promoter structure and function...