Kathleen G O'Malley

Summary

Affiliation: National Oceanic and Atmospheric Administration
Country: USA

Publications

  1. pmc A latitudinal cline in the Chinook salmon (Oncorhynchus tshawytscha) Clock gene: evidence for selection on PolyQ length variants
    Kathleen G O'Malley
    Coastal Oregon Marine Experiment Station, Department of Fisheries and Wildlife, Hatfield Marine Science Center, Oregon State University, Newport, OR 97365, USA
    Proc Biol Sci 275:2813-21. 2008
  2. ncbi request reprint Candidate loci reveal genetic differentiation between temporally divergent migratory runs of Chinook salmon (Oncorhynchus tshawytscha)
    Kathleen G O'Malley
    Coastal Oregon Marine Experiment Station, Hatfield Marine Science Center, Department of Fisheries and Wildlife, Oregon State University, 2030 SE Marine Science Drive, Newport, Oregon 97365, USA
    Mol Ecol 16:4930-41. 2007
  3. ncbi request reprint Which genetic loci have greater population assignment power?
    Michael A Banks
    Coastal Oregon Marine Experiment Station, Hatfield Marine Science Center, Oregon State University, 2030 SE Marine Science Drive, Newport, OR 97365 5229, USA
    Bioinformatics 19:1436-8. 2003
  4. ncbi request reprint Estimation of effective population size for the long-lived darkblotched rockfish Sebastes crameri
    Daniel Gomez-Uchida
    Department of Fisheries and Wildlife and Coastal Oregon Marine Experiment Station, Hatfield Marine Science Center, Oregon State University, Newport, OR 97365, USA
    J Hered 97:603-6. 2006
  5. doi request reprint p-loci: a computer program for choosing the most efficient set of loci for parentage assignment
    Sean E Matson
    Department of Animal Sciences, Oregon State University, 2030 SE Marine Science Drive, Newport, OR 97365 5229, USA, Shellfish Genetics Program, USDA Agricultural Research Service, 2030 SE Marine Science Drive, Newport, OR 97365 5229, USA Department of Fisheries and Wildlife, Coastal Oregon Marine Experiment Station, Oregon State University, 2030 SE Marine Science Drive, Newport, OR 97365 5229, USA
    Mol Ecol Resour 8:765-8. 2008
  6. ncbi request reprint Testing advances in molecular discrimination among Chinook salmon life histories: evidence from a blind test
    Michael A Banks
    Coastal Oregon Marine Experiment Station, Department of Fisheries and Wildlife, Hatfield Marine Science Center, Oregon State University, Newport, OR, 97365, USA
    Anim Genet 45:412-20. 2014
  7. doi request reprint Nineteen novel microsatellite markers for the Olympia oyster, Ostrea conchaphila/lurida
    David A Stick
    Department of Fisheries and Wildlife, Coastal Oregon Marine Experiment Station, Oregon State University, USDA Agricultural Research Service, Hatfield Marine Science Center, 2030 SE Marine Science Drive, Newport, OR 97365, USA
    Mol Ecol Resour 9:153-5. 2009

Collaborators

Detail Information

Publications7

  1. pmc A latitudinal cline in the Chinook salmon (Oncorhynchus tshawytscha) Clock gene: evidence for selection on PolyQ length variants
    Kathleen G O'Malley
    Coastal Oregon Marine Experiment Station, Department of Fisheries and Wildlife, Hatfield Marine Science Center, Oregon State University, Newport, OR 97365, USA
    Proc Biol Sci 275:2813-21. 2008
    ..Our findings suggest that length polymorphisms in OtsClock1b PolyQ may be maintained by selection and reflect an adaptation to ecological factors correlated with latitude, such as the seasonally changing day length...
  2. ncbi request reprint Candidate loci reveal genetic differentiation between temporally divergent migratory runs of Chinook salmon (Oncorhynchus tshawytscha)
    Kathleen G O'Malley
    Coastal Oregon Marine Experiment Station, Hatfield Marine Science Center, Department of Fisheries and Wildlife, Oregon State University, 2030 SE Marine Science Drive, Newport, Oregon 97365, USA
    Mol Ecol 16:4930-41. 2007
    ..The large F(ST )estimates could therefore be the result of directional selection. Evidence presented here suggests that OtsClock1b and Ots515NWFSC may influence migration and spawning timing of Chinook salmon in these river systems...
  3. ncbi request reprint Which genetic loci have greater population assignment power?
    Michael A Banks
    Coastal Oregon Marine Experiment Station, Hatfield Marine Science Center, Oregon State University, 2030 SE Marine Science Drive, Newport, OR 97365 5229, USA
    Bioinformatics 19:1436-8. 2003
    ..WHICHLOCI is a program that determines the relative discriminatory power of alternate genetic loci and loci combinations for population assignment of individuals...
  4. ncbi request reprint Estimation of effective population size for the long-lived darkblotched rockfish Sebastes crameri
    Daniel Gomez-Uchida
    Department of Fisheries and Wildlife and Coastal Oregon Marine Experiment Station, Hatfield Marine Science Center, Oregon State University, Newport, OR 97365, USA
    J Hered 97:603-6. 2006
    ..Because small (Ne)/(N) ratios have been commonly associated with potential loss of genetic variation, our estimates need careful consideration in rockfish management and conservation...
  5. doi request reprint p-loci: a computer program for choosing the most efficient set of loci for parentage assignment
    Sean E Matson
    Department of Animal Sciences, Oregon State University, 2030 SE Marine Science Drive, Newport, OR 97365 5229, USA, Shellfish Genetics Program, USDA Agricultural Research Service, 2030 SE Marine Science Drive, Newport, OR 97365 5229, USA Department of Fisheries and Wildlife, Coastal Oregon Marine Experiment Station, Oregon State University, 2030 SE Marine Science Drive, Newport, OR 97365 5229, USA
    Mol Ecol Resour 8:765-8. 2008
    ..Simulations can incorporate linkage among markers, mating design and frequencies of null alleles and/or genotyping errors. p-loci is available for windows systems at http://marineresearch.oregonstate.edu/genetics/ploci.htm...
  6. ncbi request reprint Testing advances in molecular discrimination among Chinook salmon life histories: evidence from a blind test
    Michael A Banks
    Coastal Oregon Marine Experiment Station, Department of Fisheries and Wildlife, Hatfield Marine Science Center, Oregon State University, Newport, OR, 97365, USA
    Anim Genet 45:412-20. 2014
    ..Findings for bias or non-bias are discussed to target primary areas for further research and resolution...
  7. doi request reprint Nineteen novel microsatellite markers for the Olympia oyster, Ostrea conchaphila/lurida
    David A Stick
    Department of Fisheries and Wildlife, Coastal Oregon Marine Experiment Station, Oregon State University, USDA Agricultural Research Service, Hatfield Marine Science Center, 2030 SE Marine Science Drive, Newport, OR 97365, USA
    Mol Ecol Resour 9:153-5. 2009
    ..In a Willapa Bay reference sample, mean observed and expected heterozygosities were 0.6729 and 0.8377. Nine loci deviated from Hardy-Weinberg equilibrium. These markers have proven useful for genetic studies of the Olympia oyster...