Research Topics
| Dina Demner-FushmanSummaryAffiliation: National Institutes of Health Country: USA Publications
| Collaborators
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Detail Information
Publications
Automatically identifying health outcome information in MEDLINE recordsDina Demner-Fushman
Lister Hill National Center for Biomedical Communications, National Library of Medicine, Bethesda, MD 20894, USA
J Am Med Inform Assoc 13:52-60. 2006..This study presents a methodology for automatic identification of outcomes-related information in medical text and evaluates its potential in satisfying clinical information needs related to health care outcomes...- Frontiers of biomedical text mining: current progressPierre Zweigenbaum
LIMSI CNRS, BP 133, 91403 Orsay Cedex, France
Brief Bioinform 8:358-75. 2007..In this article we review the current state of the art in biomedical text mining or 'BioNLP' in general, focusing primarily on papers published within the past year... - The potential for automated question answering in the context of genomic medicine: an assessment of existing resources and properties of answersCasey Lynnette Overby
Department of Medical Education and Biomedical Informatics, University of Washington, Seattle, WA, USA
BMC Bioinformatics 10:S8. 2009.... 
Organizing literature information for clinical decision supportDina Demner-Fushman
Communications Engineering Branch, Lister Hill National Center for Biomedical Communications, National Library of Medicine, NIH DHHS, Bethesda, MD 20894, USA
Stud Health Technol Inform 107:602-6. 2004..We study two clustering algorithms and two methods of labeling document clusters...- UMLS content views appropriate for NLP processing of the biomedical literature vs. clinical textDina Demner-Fushman
Lister Hill National Center for Biomedical Communications LHNCBC, U S National Library of Medicine, National Institutes of Health, Bethesda, MD 20894, USA
J Biomed Inform 43:587-94. 2010..5% precision at 78.6% recall for clinical applications... - What can natural language processing do for clinical decision support?Dina Demner-Fushman
U S National Library of Medicine, National Institutes of Health, Bethesda, MD 20894, USA
J Biomed Inform 42:760-72. 2009..The current solutions to challenges posed by distinct sublanguages, intended user groups, and support goals are discussed... - Annotation and retrieval of clinically relevant imagesDina Demner-Fushman
Communications Engineering Branch, Lister Hill National Center for Biomedical Communications, US National Library of Medicine, National Institutes of Health, Bethesda, MD 20894, USA
Int J Med Inform 78:e59-67. 2009..Our second goal is to find promising approaches for providing clinical evidence at the point of service, leveraging information contained in the text and images... - Automatic summarization of MEDLINE citations for evidence-based medical treatment: a topic-oriented evaluationMarcelo Fiszman
National Library of Medicine, National Institutes of Health, 8600 Rockville Pike, Bldg 38A, Rm B1N 28J, Bethesda, MD 20894, USA
J Biomed Inform 42:801-13. 2009..The automatic summarization system significantly outperformed the baseline in both metrics. The MAP gain was 0.17 (p<0.01) and the increase in the overall score of clinical usefulness was 0.39 (p<0.05)... - PubMed on Tap: discovering design principles for online information delivery to handheld computersSusan E Hauser
Communications Engineering Branch, Lister Hill National Center for Biomedical Communications, NLM, NIH, Bethesda, MD 20894, USA
Stud Health Technol Inform 107:1430-3. 2004..Continued research is expected to discover additional user interface design principles as well as guidelines for results organization and system performance.. - Using wireless handheld computers to seek information at the point of care: an evaluation by cliniciansSusan E Hauser
Lister Hill National Center for Biomedical Communications, National Library of Information, 8600 Rockville Pike, Bethesda, MD 20894, USA
J Am Med Inform Assoc 14:807-15. 2007..To evaluate: (1) the effectiveness of wireless handheld computers for online information retrieval in clinical settings; (2) the role of MEDLINE in answering clinical questions raised at the point of care... - Essie: a concept-based search engine for structured biomedical textNicholas C Ide
Lister Hill National Center for Biomedical Communications, National Library of Medicine, Bethesda, MD 20894, USA
J Am Med Inform Assoc 14:253-63. 2007..Essie shows that a judicious combination of exploiting document structure, phrase searching, and concept based query expansion is a useful approach for information retrieval in the biomedical domain... - Extracting Rx information from clinical narrativeJames G Mork
US National Library of Medicine, National Institutes of Health, Bethesda, MD, USA
J Am Med Inform Assoc 17:536-9. 2010.... - Knowledge-based methods to help clinicians find answers in MEDLINECharles A Sneiderman
National Library of Medicine, 8600 Rockville Pike, Bethesda, MD 20894, USA
J Am Med Inform Assoc 14:772-80. 2007..This article explores whether a hybrid approach of augmenting traditional information retrieval with knowledge-based methods facilitates finding practical clinical advice in the research literature... - Towards the creation of a visual ontology of biomedical imaging entitiesMatthew S Simpson
Lister Hill National Center for Biomedical Communications, U S National Library of Medicine, Bethesda, MD
AMIA Annu Symp Proc 2012:866-75. 2012..Our results for thoracic imaging terms show that our methods are promising first steps towards the creation of a biomedical visual ontology... - Window Classification of Brain CT Images in Biomedical ArticlesZhiyun Xue
National Library of Medicine, 8600 Rockville Pike, Bethesda, MD 20894
AMIA Annu Symp Proc 2012:1023-9. 2012..Due to the inherent large variations of images among articles, it is important that the proposed method is robust. Our algorithm attained 90% accuracy in classifying images as bone window or non-bone window in a 210 image data set... - A mutation-centric approach to identifying pharmacogenomic relations in textBastien Rance
National Library of Medicine, Bethesda, MD 20894, USA
J Biomed Inform 45:835-41. 2012..To explore the notion of mutation-centric pharmacogenomic relation extraction and to evaluate our approach against reference pharmacogenomic relations... - Standardizing clinical laboratory data for secondary useSwapna Abhyankar
Lister Hill National Center for Biomedical Communications, National Library of Medicine, 8600 Rockville Pike, Building 38A 7N707, Bethesda, MD 20894, USA
J Biomed Inform 45:642-50. 2012..We have delivered this work to the MIMIC-II researchers, who have included it in their standard MIMIC-II database release so that researchers who use this database in the future will not have to do this work... - Evaluating the Importance of Image-related Text for Ad-hoc and Case-based Biomedical Article RetrievalMatthew S Simpson
Lister Hill National Center for Biomedical Communications, U S National Library of Medicine, Bethesda, MD 20894
AMIA Annu Symp Proc 2010:752-6. 2010..This suggests that visual evidence is more relevant for the case descriptions used in our study than the clinical questions... - A usability study of the PubMed on Tap user interface for PDAsGregory Alexander
Department of Health Management and Informatics, Sinclair School of Nursing, University of Missouri, Columbia, USA
Stud Health Technol Inform 107:1411-5. 2004..However, there was room for improvement in the navigational and functional characteristics, such as placing labels on icons, which affected the users' ability to use the research tool...