Research Topics
Genomes and Genes
| Anna Katerina HadjantonakisSummaryAffiliation: Memorial Sloan-Kettering Cancer Center Country: USA Publications
Research Grants
| Collaborators
|
Detail Information
Publications
Live imaging and morphometric analysis of embryonic development in the ascidian Ciona intestinalisJerry M Rhee
Developmental Biology Program, Sloan-Kettering Institute, New York, New York 10021, USA
Genesis 43:136-47. 2005..The approach we describe can be used to document morphogenetic cell and tissue rearrangements in living embryos and paves the way for a live digitized anatomical atlas of Ciona...
Crucial role for DNA ligase III in mitochondria but not in Xrcc1-dependent repairDeniz Simsek
Developmental Biology Program, Memorial Sloan Kettering Cancer Center, New York, New York 10065, USA
Nature 471:245-8. 2011..Lig3-null cells are not sensitive to several DNA-damaging agents that sensitize Xrcc1-deficient cells. Our results establish a role for Lig3 in mitochondria, but distinguish it from its interacting protein Xrcc1...
Sex-specific gene expression in preimplantation mouse embryosGuy S Eakin
Developmental Biology Program, Sloan-Kettering Institute, New York, NY 10021, USA
Genome Biol 7:205. 2006..This tiny structure has now been observed to express nearly 600 genes in a sex-specific fashion, including at least one gene (Rhox/Pem) expressed only in females from their paternal X chromosome...
A cornucopia of delights for the mouse fancierDominic P Norris
MRC Mammalian Genetics Unit, Harwell, Oxfordshire OX11 0RD, UK
Genome Biol 8:318. 2007..A report on the Mouse Molecular Genetics meeting, Hinxton, UK, 5-9 September 2007...
Dynamic in vivo imaging and cell tracking using a histone fluorescent protein fusion in miceAnna Katerina Hadjantonakis
Department of Genetics and Development, College of Physicians and Surgeons of Columbia University, 701 West 168th St, New York, NY 10032, USA
BMC Biotechnol 4:33. 2004..As a result, imaging using autofluorescent protein reporters is gaining popularity in mouse transgenic and targeted mutagenesis applications...
The primitive endoderm lineage of the mouse blastocyst: sequential transcription factor activation and regulation of differentiation by Sox17Jérôme Artus
Developmental Biology Program, Sloan Kettering Institute, New York, NY 10065, USA
Dev Biol 350:393-404. 2011..However, analysis of implantation-delayed blastocysts, revealed a role for SOX17 in the maintenance of PrE epithelial integrity, with the absence of SOX17 leading to premature delamination and migration of parietal endoderm...
Role of the gut endoderm in relaying left-right patterning in miceManuel Viotti
Developmental Biology Program, Sloan Kettering Institute, New York, New York, United States of America
PLoS Biol 10:e1001276. 2012....
BMP4 signaling directs primitive endoderm-derived XEN cells to an extraembryonic visceral endoderm identityJérôme Artus
Developmental Biology Program, Sloan Kettering Institute, New York, NY 10065, USA
Dev Biol 361:245-62. 2012..Taken together, our data suggest that XEN cells can be differentiated towards an exVE identity upon BMP4 stimulation and therefore represent a valuable tool for investigating PrE lineage differentiation...
Eomes::GFP-a tool for live imaging cells of the trophoblast, primitive streak, and telencephalon in the mouse embryoGloria S Kwon
Developmental Biology Program, Sloan Kettering Institute, New York, New York 10021, USA
Genesis 45:208-17. 2007..These features establish the Tg(Eomes::GFP) BAC transgenic strain as a novel reagent for both live imaging and the isolation of Eomes expressing cells from specific locations within the embryo...
Genetic and spectrally distinct in vivo imaging: embryonic stem cells and mice with widespread expression of a monomeric red fluorescent proteinJonathan Z Long
Developmental Biology Program, Sloan Kettering Institute, New York, NY 10021, USA
BMC Biotechnol 5:20. 2005..A mutagenesis approach directing the stepwise evolution of DsRed has produced mRFP1, the first true monomer. mRFP1 currently represents an attractive autofluorescent reporter for use in heterologous systems...
Tg(Afp-GFP) expression marks primitive and definitive endoderm lineages during mouse developmentGloria S Kwon
Developmental Biology Program, Sloan Kettering Institute, New York, New York 10021, USA
Dev Dyn 235:2549-58. 2006..These mice represent a valuable resource for live imaging as well as identification, quantitation, and isolation of cells from the primitive and definitive endoderm lineages of the developing mouse embryo...
A role for PDGF signaling in expansion of the extra-embryonic endoderm lineage of the mouse blastocystJérôme Artus
Developmental Biology Program, Sloan Kettering Institute, 1275 York Avenue, New York, NY 10065, USA
Development 137:3361-72. 2010..Taken together, our data suggest a role for PDGF signaling in the expansion of the ExEn lineage. Our observations also uncover a possible role for the PrE in regulating the size of the pluripotent EPI compartment...
Single-lineage transcriptome analysis reveals key regulatory pathways in primitive erythroid progenitors in the mouse embryoJoan Isern
Department of Medicine, Mount Sinai School of Medicine, New York, NY, USA
Blood 117:4924-34. 2011..This is the first transcriptome assembled for a single hematopoietic lineage of the embryo over the course of its differentiation...
Dual transgene strategy for live visualization of chromatin and plasma membrane dynamics in murine embryonic stem cells and embryonic tissuesSonja Nowotschin
Sloan Kettering Institute, New York, New York, USA
Genesis 47:330-6. 2009....
Afp::mCherry, a red fluorescent transgenic reporter of the mouse visceral endodermManuel Viotti
Developmental Biology Program, Sloan Kettering Institute, New York, New York, USA
Genesis 49:124-33. 2011..The Afp::mCherry reporter was also noted to be expressed in other documented sites of Afp expression including hepatocytes as well as in pancreas, digestive tract, and brain of postnatal mice...
A transgenic mouse that reveals cell shape and arrangement during ureteric bud branchingXuan Chi
Department of Genetics and Development, Columbia University Medical Center, New York, New York 10032, USA
Genesis 47:61-6. 2009..This strain should be extremely useful for studies of cell behavior during ureteric bud branching morphogenesis in wild type and mutant mouse lines...
Distinct sequential cell behaviours direct primitive endoderm formation in the mouse blastocystBerenika Plusa
Developmental Biology Program, Sloan Kettering Institute, New York, USA
Development 135:3081-91. 2008..Subsequently, a gradual progression towards a mutually exclusive expression of PrE- and EPI-specific markers occurs. Finally, cell sorting is achieved by a variety of cell behaviours and by selective apoptosis...
Troika of the mouse blastocyst: lineage segregation and stem cellsJérôme Artus
Developmental Biology Program, Sloan Kettering Institute, New York, New York 10021, USA
Curr Stem Cell Res Ther 7:78-91. 2012..In this review, we will discuss how the isolation and genetic manipulation of murine stem cells representing each of these three lineages has contributed to our understanding of the molecular basis of early developmental events...
Interaction of Wnt3a, Msgn1 and Tbx6 in neural versus paraxial mesoderm lineage commitment and paraxial mesoderm differentiation in the mouse embryoSonja Nowotschin
Developmental Biology Program, Sloan Kettering Institute, 1275 York Ave, New York, NY 10065, USA
Dev Biol 367:1-14. 2012....
A comparative analysis of extra-embryonic endoderm cell linesKemar Brown
Greenberg Division of Cardiology, Weill Cornell Medical College, New York, New York, United States of America
PLoS ONE 5:e12016. 2010..In addition, pathway analysis suggests that the ExEn may mediate some of its functions through a non-classical MAP Kinase signaling pathway downstream of TAK1...
Cellular dynamics in the early mouse embryo: from axis formation to gastrulationSonja Nowotschin
Developmental Biology Program, Sloan Kettering Institute, New York, NY 10065, USA
Curr Opin Genet Dev 20:420-7. 2010..In situ visualization of these processes in living specimens is a major goal, as it provides unprecedented detail of the individual cellular behaviors, which translate into the large-scale tissue rearrangements that shape the embryo...
Live imaging fluorescent proteins in early mouse embryosPanagiotis Xenopoulos
Developmental Biology Program, Sloan Kettering Institute, New York, New York, USA
Methods Enzymol 506:361-89. 2012..Here, we review recent advances in the application of FPs for live imaging in the early mouse embryo, as well as some of the methods used for ex utero embryo development that facilitate on-stage time-lapse specimen visualization...
Use of KikGR a photoconvertible green-to-red fluorescent protein for cell labeling and lineage analysis in ES cells and mouse embryosSonja Nowotschin
Developmental Biology Program, Sloan Kettering Institute, New York, NY 10065, USA
BMC Dev Biol 9:49. 2009..Photomodulatable fluorescent proteins are one of the emerging classes of genetically-encoded fluorescent proteins...
Production of green fluorescent protein transgenic embryonic stem cells using the GENSAT bacterial artificial chromosome libraryMark J Tomishima
Developmental Biology Program, Sloan Kettering Institute, New York, New York 10021, USA
Stem Cells 25:39-45. 2007..Our protocols provide a simple and efficient strategy to utilize the whole GENSAT BAC library to create hundreds of novel fluorescent cell lines for use in ES cell biology...
Imaging mouse development with confocal time-lapse microscopySonja Nowotschin
Developmental Biology Program, Sloan Kettering Institute, New York, USA
Methods Enzymol 476:351-77. 2010..Live imaging using genetically encoded fluorescent protein reporters is pushing the envelope of our understanding by uncovering unprecedented insights into mouse development and leading to the formulation of quantitative accurate models...
The endoderm of the mouse embryo arises by dynamic widespread intercalation of embryonic and extraembryonic lineagesGloria S Kwon
Developmental Biology Program, Sloan Kettering Institute, 1275 York Avenue, New York, NY 10021, USA
Dev Cell 15:509-20. 2008....
Can mammalian cloning combined with embryonic stem cell technologies be used to treat human diseases?Anna Katerina Hadjantonakis
Department of Genetics and Development, College of Physicians and Surgeons of Columbia University, New York, NY 10032, USA
Genome Biol 3:REVIEWS1023. 2002..A recent report offers the first 'proof of principle' of such cloning for therapeutic purposes, referred to as nuclear transplantation to produce stem cells for autologous transplantation...
A sensitive and bright single-cell resolution live imaging reporter of Wnt/ß-catenin signaling in the mouseAnna Ferrer-Vaquer
Developmental Biology Program, Sloan Kettering Institute, New York, NY, USA
BMC Dev Biol 10:121. 2010..However, even though several transgenic Wnt/β-catenin reporter strains have been generated, to date, none provides the single-cell resolution favored for live imaging studies...
Dynamic and polarized muscle cell behaviors accompany tail morphogenesis in the ascidian Ciona intestinalisYale J Passamaneck
Department of Cell and Developmental Biology, Weill Medical College of Cornell University, New York, New York, United States of America
PLoS ONE 2:e714. 2007..Investigating the cell behaviors underlying the morphogenesis of muscle in ascidians may therefore reveal the evolutionarily conserved mechanisms operating during this process...
FGF4 is required for lineage restriction and salt-and-pepper distribution of primitive endoderm factors but not their initial expression in the mouseMinjung Kang
Developmental Biology Program, Sloan Kettering Institute, New York, NY 10065, USA
Development 140:267-79. 2013..Instead, depending on concentration, we noted no effect or conversion of all ICM cells to GATA6-positive PrE. We propose that heterogeneities in the availability of FGF produce the salt-and-pepper distribution of lineage-biased cells...
Tbx6 regulates left/right patterning in mouse embryos through effects on nodal cilia and perinodal signalingAnna Katerina Hadjantonakis
Developmental Biology Program, Sloan Kettering Institute, New York, New York, United States of America
PLoS ONE 3:e2511. 2008..Here we describe a novel role for the T-box transcription factor gene Tbx6 in left/right body axis determination in the mouse...
Ex utero culture and live imaging of mouse embryosAnna Piliszek
Developmental Biology Program, Sloan Kettering Institute, New York, NY, USA
Methods Mol Biol 770:243-57. 2011....
eXtraembryonic ENdoderm (XEN) stem cells produce factors that activate heart formationKemar Brown
Greenberg Division of Cardiology, Weill Cornell Medical College, New York, New York, United States of America
PLoS ONE 5:e13446. 2010..The recent development of protocols to isolate eXtraembryonic ENdoderm (XEN) stem cells, representing the extraembryonic endoderm lineage, from blastocyst stage mouse embryos offers new tools for the genetic dissection of cardiogenesis...
Live-imaging fluorescent proteins in mouse embryos: multi-dimensional, multi-spectral perspectivesSonja Nowotschin
Developmental Biology Program, Sloan Kettering Institute, New York, NY10065, USA
Trends Biotechnol 27:266-76. 2009..Here, we review some recent advances in this rapidly evolving field as applied to live-imaging capabilities in the mouse, the most genetically tractable mammalian model organism for embryologists...
Transthyretin mouse transgenes direct RFP expression or Cre-mediated recombination throughout the visceral endodermGloria S Kwon
Sloan Kettering Institute, New York, New York 10065, USA
Genesis 47:447-55. 2009..The Ttr::Cre strain can therefore be used as a tool for genetic modifications within the visceral endoderm lineage...
Transitions between epithelial and mesenchymal states and the morphogenesis of the early mouse embryoAnna Ferrer-Vaquer
Developmental Biology Program, Sloan Kettering Institute, New York, NY, USA
Cell Adh Migr 4:447-57. 2010..The cell behaviors and molecular mechanisms promoting transitions between these two states in the early mouse embryo are discussed in this review...
Generation of chimeras by aggregation of embryonic stem cells with diploid or tetraploid mouse embryosJérôme Artus
Developmental Biology Program, Sloan Kettering Institute, New York, NY, USA
Methods Mol Biol 693:37-56. 2011..This chapter describes a simple and economical technique used to generate mouse chimeras by embryo aggregation. Multiple aggregation combinations are described each of which can be tailored to answer particular biological questions...
A hybrid blob-slice model for accurate and efficient detection of fluorescence labeled nuclei in 3DAnthony Santella
Developmental Biology, Sloan Kettering Institute, 1275 York Avenue, New York, New York 10065, USA
BMC Bioinformatics 11:580. 2010..Variability in nuclear appearance and undersampled volumetric data make this a challenge...
Afp::mCherry, a red fluorescent transgenic reporter of the mouse visceral endodermManuel Viotti
Developmental Biology Program, Sloan Kettering Institute, New York, New York Biochemistry, Cell and Molecular Biology Graduate Program, Weill Medical College of Cornell University, New York, New York
Genesis 49:spcone. 2011..Red and green fluorescent reporter-expressing cells are located in the endoderm layer along villi, but excluded from the crypt stem cell zone. See the article by Viotti at al. in this issue...
Nap1-mediated actin remodeling is essential for mammalian myoblast fusionScott J Nowak
Program in Developmental Biology, Sloan Kettering Institute, New York, NY 10065, USA
J Cell Sci 122:3282-93. 2009....
Cell lineage allocation within the inner cell mass of the mouse blastocystPanagiotis Xenopoulos
Developmental Biology Program, Sloan Kettering Institute, New York, NY 10065, USA
Results Probl Cell Differ 55:185-202. 2012..We discuss recent advances that have focused on elucidating how the salt-and-pepper pattern is established and then resolved within the ICM, leading to the correct apposition of cell lineages in preparation for implantation...
Transthyretin mouse transgenes direct RFP expression or Cre-mediated recombination throughout the visceral endodermGloria S Kwon
Developmental Biology Program, Sloan Kettering Institute, New York, New York
Genesis 47:spcone. 2009..3D reconstructions of confocal z-stacks reveal reporter localization throughout the visceral endoderm (righthand image of each pair). See the paper by Kwon and Hadjantonakis in this issue...
Technicolour transgenics: imaging tools for functional genomics in the mouseAnna-Katerina Hadjantonakis
Department of Genetics and Development, College of Physicians and Surgeons of Columbia University, New York 10032, USA
Nat Rev Genet 4:613-25. 2003..Importantly, these technologies allow direct visual access to complex events as they happen in their native environment, which provides greater insights into mammalian biology than ever before...
Embryonic stem cells and mice expressing different GFP variants for multiple non-invasive reporter usage within a single animalAnna Katerina Hadjantonakis
Samuel Lunenfeld Research Institute, Mount Sinai Hospital, Toronto, Canada
BMC Biotechnol 2:11. 2002..We have previously demonstrated the utility and developmental neutrality of enhanced green fluorescent protein (EGFP) in embryonic stem (ES) cells and mice 2...
Using a histone yellow fluorescent protein fusion for tagging and tracking endothelial cells in ES cells and miceStuart T Fraser
Department of Medicine, Mount Sinai School of Medicine, New York, NY 10029, USA
Genesis 42:162-71. 2005..These transgenic lines permit real-time imaging in normal and pathological vasculogenesis and angiogenesis to track individual cells and mitotic events at a level of detail that is unprecedented in the mouse...
Tbr2 directs conversion of radial glia into basal precursors and guides neuronal amplification by indirect neurogenesis in the developing neocortexAlessandro Sessa
Molecular Neuropathology Laboratory, SCRI, San Raffaele Scientific Institute, Via Olgettina 58, 20132 Milan, Italy
Neuron 60:56-69. 2008..Together, these findings identify Tbr2 as a critical factor for the specification of IPCs during corticogenesis...
Live imaging of fluorescent proteins in chordate embryos: from ascidians to miceYale J Passamaneck
Department of Cell and Developmental Biology, Weill Medical College of Cornell University, New York, New York 10021, USA
Microsc Res Tech 69:160-7. 2006....
In vivo imaging and differential localization of lipid-modified GFP-variant fusions in embryonic stem cells and miceJerry M Rhee
Developmental Biology Program, Sloan-Kettering Institute, 1275 York Avenue, New York, NY 10021, USA
Genesis 44:202-18. 2006..Furthermore, combining these reporters with the study of mouse mutants will be a step forward in understanding the inter- and intracellular behaviors underlying morphogenesis in both normal and mutant contexts...
The first cleavage of the mouse zygote predicts the blastocyst axisBerenika Plusa
Wellcome Trust and Cancer Research UK Gurdon Institute, University of Cambridge, Tennis Court Road, Cambridge CB2 1QR, UK
Nature 434:391-5. 2005..Thus, the first cleavage contributes to breaking the symmetry of the embryo, generating blastomeres with different developmental characteristics...
Developmental potential and behavior of tetraploid cells in the mouse embryoGuy S Eakin
Program in Developmental Biology, Baylor College of Medicine, Houston, TX 77030, USA
Dev Biol 288:150-9. 2005..These findings suggest that the results of previously published tetraploid complementation assays may be influenced by the presence of tetraploid cells in the otherwise diploid embryonic regions...
Research Grants
- Morphogenesis of the paraxial mesoderm in miceAnna Katerina Hadjantonakis; Fiscal Year: 2007....
- Morphogenesis of the paraxial mesoderm in miceAnna Katerina Hadjantonakis; Fiscal Year: 2010....
- Morphogenesis of mammalian gut endodermAnna Katerina Hadjantonakis; Fiscal Year: 2010....
