Research Topics

Susan M Huse

Summary

Affiliation: Marine Biological Laboratory
Country: USA

Publications

  1. pmc The Biological Observation Matrix (BIOM) format or: how I learned to stop worrying and love the ome-ome
    Daniel McDonald
    Department of Computer Science, Northern Arizona University, Flagstaff, AZ, USA
    Gigascience 1:7. 2012
  2. pmc A core human microbiome as viewed through 16S rRNA sequence clusters
    Susan M Huse
    Josephine Bay Paul Center, Marine Biological Laboratory, Woods Hole, Massachusetts, United States of America
    PLoS ONE 7:e34242. 2012
  3. pmc Accuracy and quality of massively parallel DNA pyrosequencing
    Susan M Huse
    Josephine Bay Paul Center, Marine Biological Laboratory at Woods Hole, MBL Street, Woods Hole, MA 02543, USA
    Genome Biol 8:R143. 2007
  4. pmc Defining the healthy "core microbiome" of oral microbial communities
    Egija Zaura
    Department of Cariology, Academic Centre for Dentistry Amsterdam ACTA, University of Amsterdam and Free University Amsterdam, The Netherlands
    BMC Microbiol 9:259. 2009
  5. pmc Exploring the oral microbiota of children at various developmental stages of their dentition in the relation to their oral health
    Wim Crielaard
    TNO Quality of Life, Business Unit Food and Biotechnology Innovations, Microbial Genomics Group, Utrechtseweg 48, Zeist, The Netherlands
    BMC Med Genomics 4:22. 2011

Collaborators

  • Wim Crielaard
  • Egija Zaura
  • Daniel McDonald
  • Bart J F Keijser
  • Folker Meyer
  • Jesse Stombaugh
  • Andreas Wilke
  • Jose C Clemente
  • Jai Ram Rideout
  • J Gregory Caporaso
  • Justin Kuczynski
  • Rob Knight
  • John Hufnagle
  • Doug Wendel
  • Annemarie A Schuller
  • Roy C Montijn

Detail Information

Publications5

  1. pmc The Biological Observation Matrix (BIOM) format or: how I learned to stop worrying and love the ome-ome
    Daniel McDonald
    Department of Computer Science, Northern Arizona University, Flagstaff, AZ, USA
    Gigascience 1:7. 2012
    ....
  2. pmc A core human microbiome as viewed through 16S rRNA sequence clusters
    Susan M Huse
    Josephine Bay Paul Center, Marine Biological Laboratory, Woods Hole, Massachusetts, United States of America
    PLoS ONE 7:e34242. 2012
    ..Finally, we note that even OTUs present in nearly every subject, or that dominate in some samples, showed orders of magnitude variation in relative abundance emphasizing the highly variable nature across individuals...
  3. pmc Accuracy and quality of massively parallel DNA pyrosequencing
    Susan M Huse
    Josephine Bay Paul Center, Marine Biological Laboratory at Woods Hole, MBL Street, Woods Hole, MA 02543, USA
    Genome Biol 8:R143. 2007
    ....
  4. pmc Defining the healthy "core microbiome" of oral microbial communities
    Egija Zaura
    Department of Cariology, Academic Centre for Dentistry Amsterdam ACTA, University of Amsterdam and Free University Amsterdam, The Netherlands
    BMC Microbiol 9:259. 2009
    ..The aim of this study therefore was to define the healthy oral microbiome using recent advances in sequencing technology (454 pyrosequencing)...
  5. pmc Exploring the oral microbiota of children at various developmental stages of their dentition in the relation to their oral health
    Wim Crielaard
    TNO Quality of Life, Business Unit Food and Biotechnology Innovations, Microbial Genomics Group, Utrechtseweg 48, Zeist, The Netherlands
    BMC Med Genomics 4:22. 2011
    ..The microbial composition of saliva was assessed by barcoded pyrosequencing of the V5-V6 hypervariable regions of the 16 S rRNA, as well as by using phylogenetic microarrays...