Affiliation: Los Alamos National Laboratory
- Retrieval and on-the-fly alignment of sequence fragments from the HIV databaseB Gaschen
HIV Database and Analysis Group T10, Los Alamos National Laboratory, Mail Stop K710, Los Alamos, NM 87545, USA
Bioinformatics 17:415-8. 2001..Retrieving and aligning the almost 560 gp120 sequences (approximately>1500 nt) stored in the database is at least 1500 times faster than a similar Clustal alignment...
- Using human immunodeficiency virus type 1 sequences to infer historical features of the acquired immune deficiency syndrome epidemic and human immunodeficiency virus evolutionK Yusim
Los Alamos National Laboratory, Los Alamos, PO Box 1663, NM 87545, USA
Philos Trans R Soc Lond B Biol Sci 356:855-66. 2001..Coalescent methods were used to infer the demographic history of the HIV-1 epidemic in the DRC, and the results suggest an increase in the exponential growth rate of the infected population through time...
- Evolutionary and immunological implications of contemporary HIV-1 variationB Korber
Division of Theoretical Biology and Biophysics, Los Alamos National Laboratory, Los Alamos, New Mexico 98545, USA
Br Med Bull 58:19-42. 2001..The impact of HIV-1 variation on host immune response is reviewed in this context...